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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6KZo | 0791 | 2023-10-03 | 2019-09-25 | 3.3 | 3.57 | — | 3.5 | 0.014 | 1.41 | 3.0 | 0.10 | 15.03 | 0.01 | 2.196 | 36.78 | 9.01 | 3.3 | 96.0 | 0.7 | -1.32 | 0.60 | 0.82 | 2.55 | 3.5 | 0.003 | 0.72 | 0.0 | 0.04 | 16.09 | 0.00 | 2.132 | 8.08 | 0.58 | 3.4 | 96.5 | 0.1 | 1.39 | 1.33 | 0.58 | 0.83 | 1.86 | 8238 | 967 | 1 | 0 | 22 | 0 | 0 | logfile |
✔ | 6LRR | 0959 | 2023-10-20 | 2020-01-16 | 3.37 | 3.45 | — | 3.4 | 0.014 | 1.22 | 0.0 | 0.07 | 11.04 | 0.01 | 2.274 | 9.33 | 0.52 | 7.6 | 92.3 | 0.1 | -5.11 | 0.71 | 0.84 | 3.59 | 3.4 | 0.004 | 0.69 | 0.0 | 0.05 | 15.07 | 0.00 | 2.137 | 15.65 | 0.32 | 5.5 | 94.5 | 0.0 | -1.61 | 0.58 | 0.72 | 0.84 | 2.61 | 43706 | 5494 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N4T | 24177 | 2023-10-06 | 2021-06-04 | 2.4 | 3.03 | 2.47 | 2.8 | 0.004 | 0.90 | 1.0 | 0.05 | 14.86 | 0.00 | 2.198 | 7.06 | 0.14 | 6.0 | 94.0 | 0.0 | 0.31 | 0.81 | 0.86 | 4.16 | 2.8 | 0.003 | 0.61 | 0.0 | 0.04 | 16.53 | 0.00 | 2.128 | 7.02 | 0.87 | 5.2 | 94.8 | 0.0 | 0.12 | 1.57 | 0.74 | 0.84 | 3.87 | 12887 | 1603 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 7QV9 | 14171 | 2023-10-19 | 2022-01-20 | 3.5 | 3.56 | — | 3.5 | 0.021 | 2.21 | 183.0 | 0.13 | 14.76 | 0.01 | 1.898 | 37.15 | 10.34 | 8.2 | 90.5 | 1.3 | -2.97 | 0.78 | 0.71 | 1.18 | 3.4 | 0.003 | 0.77 | 0.0 | 0.04 | 16.53 | 0.00 | 1.205 | 11.79 | 0.41 | 8.3 | 91.6 | 0.1 | -1.28 | 1.81 | 0.78 | 0.72 | 1.08 | 41491 | 5245 | 19 | 72 | 9 | 0 | 0 | logfile |
✔ | 8CW9 | 27024 | 2023-10-14 | 2022-05-18 | 3.46 | 2.48 | — | 2.2 | 0.002 | 0.67 | 0.0 | 0.05 | 13.48 | 0.01 | 2.196 | 3.46 | 1.25 | 5.7 | 94.1 | 0.1 | -1.23 | 0.74 | 0.73 | 2.43 | 2.2 | 0.004 | 0.77 | 0.0 | 0.05 | 15.66 | 0.00 | 2.153 | 14.19 | 0.58 | 4.7 | 95.3 | 0.0 | -0.36 | 1.51 | 0.77 | 0.76 | 1.93 | 20229 | 2658 | 18 | 0 | 3 | 0 | 0 | logfile |
✔ | 7AR7 | 11875 | 2023-10-05 | 2020-10-23 | 3.72 | 3.58 | 3.33 | 3.5 | 0.004 | 0.72 | 0.0 | 0.07 | 14.84 | 0.00 | 1.343 | 12.41 | 0.03 | 6.5 | 93.5 | 0.0 | -0.26 | 0.76 | 0.81 | 2.01 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 16.33 | 0.00 | 2.144 | 12.11 | 0.36 | 6.3 | 93.7 | 0.0 | 0.02 | 0.94 | 0.76 | 0.81 | 1.54 | 60606 | 7564 | 61 | 0 | 54 | 0 | 0 | logfile |
✔ | 6V0D | 20994 | 2023-10-18 | 2019-11-18 | 3.49 | 3.41 | — | 3.4 | 0.005 | 0.87 | 0.0 | 0.05 | 9.83 | 0.01 | 2.311 | 3.94 | 0.00 | 2.3 | 97.7 | 0.0 | -3.27 | 0.78 | 0.81 | 2.82 | 3.4 | 0.003 | 0.69 | 0.0 | 0.05 | 13.75 | 0.00 | 2.197 | 9.50 | 0.20 | 4.4 | 95.6 | 0.0 | -1.87 | 1.51 | 0.80 | 0.84 | 2.52 | 37920 | 4992 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZRH | 14914 | 2023-10-05 | 2022-05-04 | 3.4 | 3.53 | 3.41 | 3.5 | 0.004 | 0.75 | 0.0 | 0.05 | 15.56 | 0.01 | 2.242 | 6.63 | 0.00 | 4.2 | 95.8 | 0.0 | -1.07 | 0.71 | 0.83 | 2.05 | 3.5 | 0.004 | 0.58 | 0.0 | 0.04 | 15.78 | 0.00 | 2.194 | 10.81 | 0.18 | 4.3 | 95.7 | 0.0 | 0.22 | 1.47 | 0.71 | 0.86 | 1.94 | 11014 | 1450 | 6 | 0 | 9 | 0 | 0 | logfile |
✔ | 7ZGo | 14709 | 2023-10-03 | 2022-04-04 | 2.55 | 2.04 | 2.53 | 2.6 | 0.008 | 1.24 | 0.0 | 0.06 | 16.84 | 0.00 | 2.170 | 9.40 | 0.00 | 3.4 | 96.6 | 0.0 | 1.35 | 0.50 | 0.76 | 3.14 | 2.6 | 0.002 | 0.50 | 0.0 | 0.04 | 16.48 | 0.00 | 2.254 | 8.96 | 0.52 | 3.1 | 96.9 | 0.0 | 2.18 | 1.09 | 0.53 | 0.79 | 3.51 | 7754 | 940 | 6 | 0 | 21 | 24 | 0 | logfile |
✔ | 7WKS | 32568 | 2023-10-03 | 2022-01-11 | 3.0 | 2.57 | — | 3.0 | 0.002 | 0.54 | 0.0 | 0.04 | 13.07 | 0.00 | 2.162 | 7.24 | 0.00 | 1.1 | 98.9 | 0.0 | 1.77 | 0.60 | 0.81 | 2.12 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 16.04 | 0.00 | 2.218 | 8.33 | 0.78 | 0.8 | 99.2 | 0.0 | 1.85 | 0.91 | 0.59 | 0.83 | 1.38 | 5874 | 754 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VGJ | 31971 | 2023-10-05 | 2021-09-16 | 3.98 | 3.67 | — | 3.5 | 0.007 | 0.91 | 0.0 | 0.05 | 15.32 | 0.01 | 2.160 | 26.07 | 0.48 | 16.4 | 83.6 | 0.0 | -3.55 | 0.62 | 0.78 | 2.06 | 3.5 | 0.003 | 0.71 | 0.0 | 0.04 | 16.65 | 0.00 | 2.182 | 15.76 | 0.40 | 10.9 | 89.1 | 0.0 | -1.97 | 0.44 | 0.61 | 0.77 | 1.69 | 11460 | 1414 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 6FEQ | 4246 | 2023-10-06 | 2018-01-03 | 3.6 | 3.83 | — | 3.7 | 0.011 | 1.05 | 0.0 | 0.06 | 10.45 | 0.01 | 2.271 | 4.71 | 0.15 | 5.8 | 94.2 | 0.0 | -4.17 | 0.66 | 0.83 | 3.20 | 3.7 | 0.003 | 0.68 | 0.0 | 0.04 | 13.29 | 0.00 | 2.160 | 9.99 | 0.07 | 4.7 | 95.3 | 0.0 | 0.25 | 1.65 | 0.67 | 0.83 | 2.72 | 12397 | 1582 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 7VGH | 31969 | 2023-10-06 | 2021-09-16 | 3.39 | 3.14 | — | 3.3 | 0.005 | 0.75 | 0.0 | 0.05 | 14.96 | 0.00 | 1.989 | 9.00 | 0.23 | 12.4 | 87.6 | 0.0 | -2.72 | 0.67 | 0.84 | 2.72 | 3.3 | 0.005 | 0.67 | 0.0 | 0.05 | 16.45 | 0.00 | 1.946 | 7.87 | 0.53 | 12.3 | 87.7 | 0.0 | -2.05 | 1.12 | 0.67 | 0.86 | 2.46 | 12404 | 1521 | 7 | 0 | 14 | 0 | 0 | logfile |
✔ | 6J8J | 9782 | 2023-10-06 | 2019-01-19 | 3.2 | 3.36 | — | 3.3 | 0.010 | 1.51 | 0.0 | 0.16 | 22.07 | 0.01 | 1.829 | 71.00 | 28.80 | 2.5 | 96.2 | 1.3 | 2.79 | 0.59 | 0.76 | 1.66 | 3.4 | 0.004 | 0.79 | 0.0 | 0.06 | 18.17 | 0.00 | 2.139 | 9.51 | 0.47 | 3.9 | 95.9 | 0.2 | 0.53 | 1.44 | 0.60 | 0.83 | 1.73 | 11764 | 1433 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6V0G | 20997 | 2023-10-07 | 2019-11-18 | 3.03 | 3.23 | — | 3.2 | 0.008 | 1.16 | 0.0 | 0.07 | 11.01 | 0.01 | 2.289 | 6.08 | 0.00 | 2.4 | 97.6 | 0.0 | -2.93 | 0.77 | 0.82 | 3.01 | 3.2 | 0.003 | 0.67 | 0.0 | 0.05 | 14.29 | 0.00 | 2.173 | 9.18 | 0.06 | 4.0 | 96.0 | 0.0 | -1.13 | 2.00 | 0.77 | 0.84 | 3.08 | 15252 | 2010 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6M4H | 30078 | 2023-10-04 | 2020-03-07 | 3.9 | 4.39 | — | 3.9 | 0.008 | 0.89 | 0.0 | 0.05 | 29.18 | 0.01 | 1.729 | 27.61 | 2.85 | 3.1 | 96.7 | 0.2 | -6.02 | 0.82 | 0.76 | 1.36 | 4.0 | 0.006 | 0.78 | 0.0 | 0.04 | 29.95 | 0.00 | 2.087 | 19.84 | 0.89 | 3.1 | 96.9 | 0.0 | 0.99 | 1.75 | 0.87 | 0.85 | 0.92 | 9420 | 656 | 10 | 206 | 0 | 0 | 0 | logfile |
✔ | 6C96 | 7434 | 2023-10-06 | 2018-01-25 | 3.4 | 3.54 | — | 3.5 | 0.010 | 1.05 | 0.0 | 0.06 | 10.48 | 0.01 | 2.277 | 3.50 | 0.30 | 5.1 | 94.9 | 0.0 | -4.38 | 0.58 | 0.82 | 3.11 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 15.42 | 0.00 | 2.140 | 7.49 | 0.38 | 4.1 | 95.9 | 0.0 | 1.07 | 0.76 | 0.59 | 0.83 | 1.85 | 12090 | 1446 | 6 | 0 | 8 | 0 | 0 | logfile |
✔ | 6XoS | 22278 | 2023-10-03 | 2020-07-07 | 3.7 | 4.30 | 3.63 | 3.9 | 0.009 | 1.09 | 0.0 | 0.06 | 13.21 | 0.01 | 2.225 | 2.95 | 0.00 | 2.4 | 97.6 | 0.0 | -1.45 | 0.89 | 0.82 | 1.85 | 3.9 | 0.003 | 0.74 | 0.0 | 0.04 | 14.50 | 0.00 | 2.139 | 8.51 | 0.12 | 2.1 | 97.9 | 0.0 | 1.56 | 0.98 | 0.89 | 0.85 | 1.81 | 7704 | 966 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZRM | 14919 | 2023-10-05 | 2022-05-04 | 3.7 | 3.18 | 3.69 | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 14.87 | 0.01 | 2.260 | 7.18 | 0.00 | 5.1 | 94.9 | 0.0 | -1.35 | 0.64 | 0.79 | 0.91 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 16.43 | 0.00 | 2.204 | 11.63 | 0.44 | 4.6 | 95.4 | 0.0 | 0.02 | 1.07 | 0.64 | 0.81 | 1.11 | 10839 | 1450 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 6XoU | 22280 | 2023-10-03 | 2020-07-07 | 4.0 | 4.67 | 4.02 | 4.1 | 0.005 | 1.06 | 0.0 | 0.06 | 13.63 | 0.01 | 2.261 | 4.13 | 0.23 | 2.8 | 97.2 | 0.0 | -1.51 | 0.89 | 0.75 | — | 4.1 | 0.003 | 0.85 | 0.0 | 0.04 | 14.98 | 0.00 | 2.141 | 12.38 | 0.70 | 2.9 | 97.1 | 0.0 | 1.17 | 1.78 | 0.91 | 0.85 | — | 7697 | 965 | 1 | 0 | 0 | 0 | 0 | logfile |