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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7CRB | 30449 | 2023-11-14 | 2020-08-13 | 3.16 | 3.51 | — | 3.4 | 0.005 | 0.81 | 2.0 | 0.05 | 13.84 | 0.00 | 2.288 | 8.58 | 0.77 | 8.8 | 91.2 | 0.0 | -2.29 | 0.75 | 0.82 | 3.00 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 15.65 | 0.00 | 2.258 | 9.16 | 0.13 | 7.2 | 92.8 | 0.0 | -1.12 | 1.16 | 0.71 | 0.81 | 2.71 | 6806 | 851 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7D0J | 30536 | 2023-11-17 | 2020-09-10 | 3.42 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 68860 | 5923 | 56 | 0 | 453 | 0 | 0 | logfile |
✔ | 7oQY | 13034 | 2023-11-19 | 2021-06-04 | 2.61 | 2.96 | 2.55 | 2.9 | 0.020 | 0.88 | 0.0 | 0.20 | 13.68 | 0.00 | 1.842 | 4.99 | 0.00 | 2.9 | 97.1 | 0.0 | -0.33 | 0.67 | 0.82 | 3.68 | 2.9 | 0.005 | 0.81 | 0.0 | 0.05 | 16.31 | 0.00 | 1.531 | 4.92 | 1.06 | 3.0 | 97.0 | 0.0 | -0.38 | 0.30 | 0.66 | 0.84 | 3.47 | 28032 | 3535 | 20 | 0 | 10 | 0 | 0 | logfile |
✔ | 8F6H | 28883 | 2023-11-17 | 2022-11-16 | 3.9 | 4.17 | 3.97 | 4.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.60 | 0.00 | 1.887 | 6.02 | 0.00 | 5.9 | 94.0 | 0.2 | -0.05 | 0.72 | 0.79 | 2.38 | 4.1 | 0.003 | 0.54 | 0.0 | 0.04 | 15.26 | 0.00 | 1.817 | 9.05 | 0.18 | 6.5 | 93.2 | 0.2 | 0.26 | 0.49 | 0.72 | 0.79 | 2.22 | 20768 | 1358 | 8 | 0 | 6 | 0 | 10347 | logfile |
✔ | 6EBM | 9026 | 2023-11-14 | 2018-08-06 | 4.0 | 4.06 | — | 3.9 | 0.012 | 1.10 | 0.0 | 0.06 | 9.31 | 0.01 | 2.049 | 5.25 | 0.00 | 5.4 | 94.6 | 0.0 | -4.86 | 0.66 | 0.79 | — | 3.8 | 0.004 | 0.92 | 0.0 | 0.05 | 14.09 | 0.00 | 2.206 | 18.26 | 1.17 | 4.5 | 95.5 | 0.0 | 0.27 | 0.98 | 0.66 | 0.80 | — | 8532 | 1192 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 7Z6Q | 14528 | 2023-11-22 | 2022-03-14 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36557 | 3956 | 28 | 0 | 91 | 10 | 0 | logfile |
✔ | 8DM6 | 27528 | 2023-11-14 | 2022-07-08 | 2.77 | 3.36 | 2.83 | 3.3 | 0.006 | 0.94 | 0.0 | 0.06 | 14.09 | 0.01 | 2.282 | 3.28 | 0.57 | 1.6 | 98.4 | 0.0 | -0.08 | 0.77 | 0.83 | 2.73 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 16.78 | 0.00 | 2.208 | 9.05 | 1.72 | 2.3 | 97.7 | 0.0 | 1.39 | 1.60 | 0.76 | 0.83 | 2.82 | 6559 | 796 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 8DM9 | 27531 | 2023-11-20 | 2022-07-08 | 2.56 | 3.10 | 2.68 | 2.8 | 0.005 | 0.88 | 0.0 | 0.06 | 13.23 | 0.01 | 2.264 | 3.60 | 0.15 | 2.0 | 97.9 | 0.1 | -0.21 | 0.78 | 0.81 | 2.41 | 2.9 | 0.003 | 0.63 | 0.0 | 0.04 | 15.38 | 0.00 | 2.156 | 9.57 | 1.39 | 2.1 | 97.9 | 0.0 | 0.49 | 2.11 | 0.78 | 0.83 | 2.51 | 30004 | 3689 | 26 | 0 | 62 | 0 | 0 | logfile |
✔ | 7oiM | 12932 | 2023-11-21 | 2021-05-11 | 4.0 | 4.68 | 3.92 | 3.7 | 0.006 | 1.32 | 7.0 | 0.07 | 13.98 | 0.01 | 2.069 | 5.16 | 0.05 | 8.1 | 91.7 | 0.2 | -3.63 | 0.81 | 0.66 | — | 3.8 | 0.003 | 0.76 | 0.0 | 0.04 | 15.27 | 0.00 | 2.083 | 13.43 | 0.33 | 7.2 | 92.8 | 0.0 | -0.40 | 0.67 | 0.90 | 0.81 | — | 35597 | 4426 | 1 | 0 | 6 | 0 | 0 | logfile |
✔ | 7oCi | 12808 | 2023-11-16 | 2021-04-27 | 3.46 | 3.63 | — | 3.6 | 0.006 | 1.26 | 0.0 | 0.59 | 14.98 | 0.01 | 2.155 | 6.07 | 0.00 | 2.8 | 97.2 | 0.0 | -2.61 | 0.65 | 0.87 | 3.56 | 3.6 | 0.003 | 1.17 | 0.0 | 0.10 | 15.43 | 0.00 | 2.083 | 4.82 | 0.57 | 2.9 | 97.1 | 0.0 | -0.78 | 0.36 | 0.64 | 0.89 | 3.18 | 17077 | 2071 | 18 | 0 | 46 | 0 | 0 | logfile |
✔ | 7SXS | 25504 | 2023-11-19 | 2021-11-24 | 2.64 | 3.48 | — | 2.9 | 0.005 | 0.78 | 0.0 | 0.05 | 13.05 | 0.01 | 2.272 | 2.49 | 0.00 | 2.8 | 97.2 | 0.0 | -0.63 | 0.85 | 0.84 | 2.76 | 2.9 | 0.004 | 0.59 | 0.0 | 0.04 | 14.40 | 0.00 | 2.120 | 7.15 | 0.70 | 2.2 | 97.8 | 0.0 | 0.61 | 1.18 | 0.86 | 0.86 | 2.79 | 25245 | 3120 | 24 | 0 | 60 | 0 | 0 | logfile |
✔ | 8DLM | 27506 | 2023-11-19 | 2022-07-08 | 2.89 | 3.78 | 3.09 | 3.1 | 0.005 | 0.79 | 0.0 | 0.06 | 13.35 | 0.01 | 2.293 | 3.34 | 0.03 | 1.8 | 98.2 | 0.0 | 0.41 | 0.83 | 0.82 | 2.35 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 14.94 | 0.00 | 2.144 | 9.86 | 1.03 | 2.7 | 97.3 | 0.0 | 0.90 | 1.24 | 0.83 | 0.84 | 2.31 | 26852 | 3303 | 26 | 0 | 62 | 0 | 0 | logfile |
✔ | 8CYC | 27074 | 2023-11-20 | 2022-05-23 | 2.9 | 3.44 | 2.92 | 3.2 | 0.002 | 0.53 | 0.0 | 0.04 | 13.71 | 0.00 | 2.186 | 8.20 | 0.16 | 5.4 | 94.3 | 0.3 | -0.06 | 0.74 | 0.71 | 1.18 | 3.2 | 0.008 | 0.79 | 0.0 | 0.05 | 15.75 | 0.00 | 2.062 | 17.01 | 3.06 | 8.2 | 91.6 | 0.2 | -1.16 | 0.55 | 0.76 | 0.77 | 1.84 | 28697 | 3677 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LG5 | 23311 | 2023-11-19 | 2021-01-19 | 2.63 | 3.69 | 2.85 | 3.3 | 0.018 | 1.83 | 4.0 | 0.10 | 10.29 | 0.01 | 1.766 | 1.08 | 0.00 | 3.9 | 96.1 | 0.0 | -0.64 | 0.90 | 0.88 | 3.10 | 3.3 | 0.006 | 0.71 | 0.0 | 0.05 | 12.41 | 0.00 | 1.913 | 5.58 | 0.81 | 5.3 | 94.7 | 0.0 | -0.22 | 0.69 | 0.88 | 0.88 | 3.04 | 26888 | 3484 | 8 | 0 | 20 | 0 | 0 | logfile |
✔ | 7TEX | 25854 | 2023-11-19 | 2022-01-06 | 3.27 | 4.06 | — | 3.3 | 0.005 | 0.80 | 0.0 | 0.06 | 13.34 | 0.01 | 2.280 | 2.91 | 0.17 | 1.4 | 98.6 | 0.0 | 0.73 | 0.84 | 0.83 | 2.15 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 14.64 | 0.00 | 2.158 | 9.77 | 0.07 | 2.9 | 97.1 | 0.0 | 0.93 | 0.63 | 0.85 | 0.86 | 2.12 | 26839 | 3303 | 26 | 0 | 62 | 0 | 0 | logfile |
✘ | 7WZN | 32907 | 2023-11-19 | 2022-02-18 | 4.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 27190 | 3726 | 30 | 0 | 211 | 0 | 0 | logfile |
✘ | 8CYD | 27075 | 2023-11-20 | 2022-05-23 | 2.6 | 3.24 | 2.62 | 3.0 | 0.002 | 0.51 | 0.0 | 0.04 | 12.52 | 0.01 | 1.930 | 6.47 | 0.32 | 4.9 | 94.7 | 0.4 | 0.04 | 0.77 | 0.79 | 2.24 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28454 | 3663 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MJH | 23873 | 2023-11-19 | 2021-04-20 | 2.66 | 3.49 | — | 3.0 | 0.005 | 0.77 | 0.0 | 0.05 | 13.30 | 0.01 | 2.266 | 3.37 | 0.00 | 3.0 | 97.0 | 0.0 | -0.62 | 0.82 | 0.82 | 2.50 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 15.13 | 0.00 | 2.153 | 9.18 | 1.08 | 2.3 | 97.7 | 0.0 | 0.60 | 1.19 | 0.82 | 0.83 | 2.23 | 28143 | 3495 | 27 | 0 | 60 | 0 | 0 | logfile |
✔ | 7oiK | 12931 | 2023-11-22 | 2021-05-11 | 3.5 | 4.50 | 3.60 | 3.1 | 0.006 | 1.31 | 11.0 | 0.07 | 12.06 | 0.01 | 2.148 | 5.35 | 0.02 | 8.9 | 90.9 | 0.2 | -3.74 | 0.88 | 0.78 | 0.84 | 3.1 | 0.003 | 0.75 | 0.0 | 0.04 | 13.72 | 0.00 | 1.946 | 12.54 | 0.15 | 7.4 | 92.6 | 0.0 | -0.10 | 1.60 | 0.88 | 0.78 | 0.78 | 36779 | 4579 | 3 | 0 | 4 | 0 | 0 | logfile |
✔ | 7D60 | 30586 | 2023-11-19 | 2020-09-28 | 2.61 | 2.73 | — | 2.7 | 0.006 | 0.89 | 0.0 | 0.05 | 16.89 | 0.01 | 2.395 | 1.56 | 0.00 | 2.1 | 97.9 | 0.0 | -6.95 | 0.70 | 0.83 | 2.76 | 2.7 | 0.002 | 0.60 | 0.0 | 0.04 | 17.99 | 0.00 | 2.197 | 3.56 | 2.04 | 2.2 | 97.8 | 0.0 | 1.03 | 0.53 | 0.69 | 0.84 | 2.00 | 26664 | 3168 | 22 | 0 | 55 | 0 | 0 | logfile |