The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8EJH | 28182 | 2023-11-16 | 2022-09-16 | 3.71 | 4.24 | 3.87 | 4.0 | 0.021 | 1.83 | 0.0 | 0.15 | 10.16 | 0.01 | 2.321 | 2.57 | 0.00 | 5.7 | 94.3 | 0.0 | -0.18 | 0.78 | 0.78 | 2.12 | 4.0 | 0.004 | 0.86 | 0.0 | 0.04 | 16.15 | 0.00 | 2.177 | 11.44 | 0.32 | 6.9 | 93.1 | 0.0 | -0.75 | 1.89 | 0.76 | 0.76 | 2.09 | 15186 | 1761 | 45 | 0 | 99 | 0 | 0 | logfile |
✔ | 6VYF | 21458 | 2023-11-16 | 2020-02-26 | 3.3 | 3.38 | — | 3.3 | 0.005 | 0.68 | 0.0 | 0.04 | 13.96 | 0.00 | 2.223 | 8.29 | 0.27 | 8.7 | 91.3 | 0.0 | -3.53 | 0.73 | 0.87 | 2.78 | 3.3 | 0.007 | 0.70 | 0.0 | 0.05 | 15.80 | 0.00 | 2.123 | 10.28 | 0.34 | 10.4 | 89.6 | 0.0 | -1.26 | 0.90 | 0.74 | 0.89 | 3.05 | 13624 | 1728 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DNE | 27564 | 2023-11-15 | 2022-07-11 | 3.5 | 3.77 | 3.53 | 3.8 | 0.004 | 0.65 | 0.0 | 0.04 | 14.31 | 0.00 | 1.785 | 9.38 | 0.00 | 4.9 | 95.1 | 0.0 | -0.37 | 0.71 | 0.78 | 2.45 | 3.7 | 0.004 | 0.63 | 0.0 | 0.04 | 16.41 | 0.00 | 1.806 | 10.15 | 0.54 | 5.0 | 95.0 | 0.0 | -0.33 | 1.22 | 0.69 | 0.77 | 1.82 | 10281 | 1251 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7T6N | 25720 | 2023-11-17 | 2021-12-14 | 2.9 | 3.20 | — | 3.2 | 0.007 | 1.08 | 4.0 | 0.06 | 13.71 | 0.01 | 2.335 | 3.95 | 0.19 | 3.2 | 96.8 | 0.0 | -3.03 | 0.63 | 0.78 | 3.52 | 3.2 | 0.003 | 0.59 | 0.0 | 0.04 | 16.27 | 0.00 | 2.231 | 9.55 | 0.95 | 2.6 | 97.4 | 0.0 | 1.53 | 0.45 | 0.72 | 0.86 | 3.02 | 19412 | 2424 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TRF | 26088 | 2023-11-15 | 2022-01-28 | 3.7 | 4.03 | — | 3.6 | 0.005 | 0.74 | 0.0 | 0.05 | 16.37 | 0.00 | 2.206 | 7.56 | 0.10 | 4.6 | 95.3 | 0.1 | -0.55 | 0.83 | 0.81 | 1.72 | 3.6 | 0.003 | 0.58 | 0.0 | 0.03 | 16.71 | 0.00 | 2.159 | 7.56 | 0.31 | 3.5 | 96.5 | 0.0 | 0.91 | 0.64 | 0.83 | 0.83 | 1.73 | 13581 | 1106 | 5 | 224 | 0 | 0 | 0 | logfile |
✔ | 8HC7 | 34654 | 2023-11-14 | 2022-11-01 | 4.54 | 4.75 | 4.46 | 4.5 | 0.003 | 0.61 | 0.0 | 0.04 | 13.42 | 0.00 | 2.255 | 5.72 | 0.00 | 4.7 | 95.3 | 0.0 | -1.52 | 0.77 | 0.68 | — | 4.5 | 0.003 | 0.59 | 0.0 | 0.04 | 13.35 | 0.00 | 2.186 | 13.65 | 0.25 | 7.2 | 92.8 | 0.0 | -1.21 | 1.75 | 0.80 | 0.75 | — | 7373 | 919 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 7Eo4 | 31226 | 2023-11-14 | 2021-04-21 | 2.86 | 2.93 | — | 2.9 | 0.019 | 1.00 | 0.0 | 0.17 | 14.18 | 0.01 | 2.220 | 2.30 | 0.00 | 7.2 | 92.8 | 0.0 | -1.38 | 0.60 | 0.71 | 2.26 | 2.9 | 0.003 | 0.69 | 0.0 | 0.04 | 15.65 | 0.00 | 2.203 | 5.38 | 1.44 | 4.5 | 95.5 | 0.0 | -0.20 | 0.33 | 0.61 | 0.76 | 1.78 | 8302 | 1059 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8FEZ | 29035 | 2023-11-17 | 2022-12-07 | 3.72 | 2.90 | 3.94 | 3.1 | 0.018 | 1.77 | 1.0 | 0.10 | 9.25 | 0.01 | 1.688 | 7.96 | 0.22 | 4.6 | 95.4 | 0.0 | -1.24 | 0.74 | 0.70 | 1.40 | 2.8 | 0.003 | 0.72 | 0.0 | 0.05 | 12.16 | 0.00 | 2.109 | 10.01 | 0.33 | 8.4 | 91.5 | 0.1 | -1.64 | 1.25 | 0.76 | 0.72 | 1.44 | 17515 | 2843 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JD4 | 6633 | 2023-11-18 | 2016-03-28 | 3.4 | 3.40 | — | 3.4 | 0.009 | 0.96 | 0.0 | 0.05 | 10.21 | 0.00 | 2.157 | 15.60 | 0.00 | 6.8 | 93.0 | 0.2 | -4.82 | 0.80 | 0.86 | 3.90 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 15.60 | 0.00 | 2.026 | 11.75 | 0.32 | 3.9 | 96.1 | 0.0 | 0.50 | 0.72 | 0.80 | 0.87 | 2.40 | 24054 | 2982 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 7F3T | 31440 | 2023-11-13 | 2021-06-17 | 3.69 | 3.94 | — | 3.9 | 0.051 | 2.15 | 0.0 | 0.06 | 18.39 | 0.00 | 1.596 | 17.34 | 0.33 | 5.2 | 94.5 | 0.3 | 0.40 | 0.68 | 0.81 | 1.54 | 3.9 | 0.004 | 0.81 | 0.0 | 0.04 | 18.02 | 0.00 | 2.040 | 14.66 | 1.00 | 3.2 | 96.8 | 0.0 | 2.49 | 1.24 | 0.65 | 0.80 | 1.03 | 5632 | 660 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7XQ9 | 33391 | 2023-11-17 | 2022-05-07 | 3.3 | 3.62 | 3.55 | 3.8 | 0.005 | 0.83 | 0.0 | 0.06 | 14.70 | 0.01 | 2.253 | 1.72 | 3.89 | 3.6 | 96.4 | 0.0 | -2.05 | 0.52 | 0.82 | 2.74 | 3.8 | 0.002 | 0.51 | 0.0 | 0.03 | 15.61 | 0.00 | 2.205 | 4.12 | 0.14 | 2.2 | 97.8 | 0.0 | 3.52 | 0.53 | 0.54 | 0.83 | 2.53 | 19632 | 2412 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oKP | 20100 | 2023-11-18 | 2019-04-14 | 3.28 | 3.40 | 3.29 | 3.4 | 0.009 | 1.23 | 0.0 | 0.08 | 10.60 | 0.01 | 2.222 | 3.80 | 0.57 | 11.1 | 88.6 | 0.3 | -3.85 | 0.72 | 0.81 | 2.84 | 3.3 | 0.004 | 0.83 | 0.0 | 0.05 | 14.87 | 0.01 | 2.130 | 8.61 | 0.57 | 9.6 | 90.2 | 0.2 | -2.07 | 0.71 | 0.73 | 0.84 | 2.05 | 22857 | 2660 | 51 | 0 | 157 | 0 | 0 | logfile |
✔ | 7WiT | 32535 | 2023-11-14 | 2022-01-04 | 3.21 | 3.87 | 3.47 | 3.8 | 0.005 | 0.57 | 0.0 | 0.04 | 10.80 | 0.00 | 2.271 | 4.78 | 3.11 | 3.3 | 96.7 | 0.0 | -0.91 | 0.61 | 0.77 | 2.46 | 3.8 | 0.002 | 0.51 | 0.0 | 0.04 | 13.61 | 0.00 | 2.200 | 4.97 | 0.68 | 1.9 | 98.1 | 0.0 | 1.83 | 0.65 | 0.61 | 0.79 | 1.39 | 8109 | 1133 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8CXo | 27062 | 2023-11-13 | 2022-05-22 | 3.7 | 4.10 | 3.65 | 4.1 | 0.003 | 0.58 | 0.0 | 0.04 | 10.02 | 0.00 | 2.329 | 2.39 | 0.00 | 2.7 | 96.9 | 0.4 | 1.90 | 0.60 | 0.77 | 1.79 | 4.1 | 0.003 | 0.78 | 0.0 | 0.04 | 15.98 | 0.00 | 2.193 | 15.37 | 0.00 | 4.0 | 96.0 | 0.0 | 1.05 | 2.10 | 0.62 | 0.80 | 0.56 | 4392 | 551 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6XN3 | 22266 | 2023-11-18 | 2020-07-02 | 3.0 | 3.45 | — | 3.4 | 0.007 | 1.15 | 0.0 | 0.06 | 14.74 | 0.01 | 2.211 | 6.50 | 0.04 | 7.4 | 92.6 | 0.0 | -3.29 | 0.63 | 0.80 | 2.49 | 3.4 | 0.005 | 0.75 | 0.0 | 0.05 | 17.25 | 0.00 | 2.071 | 14.42 | 2.11 | 7.0 | 93.0 | 0.0 | -1.24 | 0.50 | 0.60 | 0.81 | 2.32 | 22049 | 2568 | 12 | 71 | 0 | 0 | 0 | logfile |
✔ | 6JPF | 6822 | 2023-11-14 | 2019-03-26 | 3.52 | 3.88 | 3.59 | 3.8 | 0.005 | 0.75 | 0.0 | 0.05 | 14.35 | 0.01 | 2.259 | 20.36 | 4.55 | 5.5 | 94.0 | 0.5 | -3.54 | 0.54 | 0.78 | 2.38 | 3.8 | 0.004 | 0.89 | 0.0 | 0.05 | 16.45 | 0.01 | 2.175 | 21.72 | 0.93 | 7.4 | 92.6 | 0.0 | -0.58 | 1.26 | 0.55 | 0.75 | 0.95 | 9588 | 1220 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DU8 | 8912 | 2023-11-15 | 2018-06-20 | 3.11 | 3.84 | — | 3.8 | 0.007 | 1.14 | 0.0 | 0.08 | 12.57 | 0.01 | 2.046 | 7.99 | 0.89 | 8.8 | 91.2 | 0.0 | -4.81 | 0.39 | 0.59 | 3.01 | 3.8 | 0.004 | 0.82 | 0.0 | 0.05 | 15.41 | 0.00 | 2.067 | 12.36 | 0.07 | 9.7 | 90.3 | 0.0 | -1.96 | 0.58 | 0.41 | 0.62 | 2.19 | 13380 | 1684 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6MLM | 9139 | 2023-11-16 | 2018-09-27 | 3.5 | 3.57 | 3.71 | 3.5 | 0.013 | 1.31 | 0.0 | 0.06 | 11.52 | 0.01 | 2.276 | 2.53 | 0.33 | 3.0 | 96.7 | 0.3 | 0.37 | 0.72 | 0.74 | 2.71 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 16.17 | 0.00 | 2.134 | 14.31 | 0.49 | 6.1 | 93.9 | 0.0 | -0.82 | 2.22 | 0.72 | 0.75 | 2.16 | 16701 | 2121 | 18 | 0 | 9 | 0 | 0 | logfile |
✔ | 7WJ5 | 32543 | 2023-11-14 | 2022-01-05 | 3.72 | 3.15 | — | 3.2 | 0.004 | 0.55 | 0.0 | 0.04 | 10.79 | 0.00 | 2.173 | 7.85 | 3.05 | 4.1 | 95.9 | 0.0 | 1.05 | 0.62 | 0.80 | 2.62 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 13.91 | 0.00 | 2.173 | 10.29 | 0.11 | 3.5 | 96.5 | 0.0 | 0.85 | 0.38 | 0.63 | 0.80 | 2.07 | 8660 | 1129 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CT0 | 7610 | 2023-11-13 | 2018-03-21 | 3.1 | 3.17 | — | 3.2 | 0.010 | 1.57 | 0.0 | 0.07 | 17.75 | 0.01 | 2.273 | 14.28 | 17.87 | 2.7 | 97.3 | 0.0 | -2.00 | 0.74 | 0.86 | 2.24 | 3.1 | 0.005 | 0.71 | 0.0 | 0.05 | 16.72 | 0.00 | 2.109 | 11.44 | 0.25 | 2.2 | 97.8 | 0.0 | 0.95 | 1.93 | 0.73 | 0.84 | 1.44 | 105600 | 13740 | 60 | 0 | 0 | 0 | 0 | logfile |