The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8GTD | 34250 | 2023-11-20 | 2022-09-08 | 4.7 | 4.27 | 4.25 | 4.2 | 0.014 | 2.16 | 0.0 | 0.00 | 5.49 | 0.01 | 2.285 | 3.73 | 0.00 | 8.4 | 90.0 | 1.6 | 0.41 | 0.50 | 0.44 | — | 4.2 | 0.004 | 0.93 | 0.0 | 0.00 | 6.20 | 0.00 | 2.228 | 4.76 | 0.00 | 19.1 | 80.2 | 0.7 | -2.63 | 1.26 | 0.52 | 0.51 | — | 29580 | 7392 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RRS | 4989 | 2023-11-21 | 2019-05-20 | 3.9 | 4.30 | 4.41 | 3.8 | 0.013 | 2.10 | 0.0 | 0.00 | 2.04 | 0.01 | 2.364 | 0.79 | 0.00 | 3.9 | 95.3 | 0.8 | -0.85 | 0.56 | 0.64 | — | 3.8 | 0.004 | 0.84 | 0.0 | 0.00 | 7.15 | 0.00 | 2.195 | 1.79 | 0.00 | 15.0 | 85.0 | 0.0 | -1.14 | 2.03 | 0.80 | 0.71 | — | 93060 | 23220 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YW7 | 10960 | 2023-11-13 | 2020-04-29 | 4.5 | 5.21 | — | 4.7 | 0.021 | 3.50 | 0.0 | 0.09 | 6.70 | 0.01 | 2.034 | 2.17 | 0.00 | 4.5 | 94.7 | 0.9 | -1.45 | 0.57 | 0.32 | — | 4.6 | 0.003 | 1.01 | 0.0 | 0.02 | 5.70 | 0.00 | 2.420 | 14.13 | 0.00 | 13.2 | 86.6 | 0.2 | -3.90 | 6.17 | 0.81 | 0.75 | — | 5426 | 1788 | 9 | 0 | 2 | 0 | 0 | logfile |
✔ | 8SVF | 40789 | 2023-11-16 | 2023-05-16 | 3.2 | 4.13 | 3.32 | 3.5 | 0.003 | 0.53 | 0.0 | 0.03 | 25.01 | 0.00 | 2.220 | 6.36 | 1.28 | 1.6 | 98.4 | 0.0 | 2.82 | 0.85 | 0.83 | 1.74 | 3.5 | 0.003 | 0.59 | 0.0 | 0.03 | 26.30 | 0.00 | 2.221 | 8.84 | 0.21 | 2.7 | 97.3 | 0.0 | 2.51 | 0.67 | 0.86 | 0.85 | 1.24 | 15254 | 1189 | 13 | 295 | 0 | 0 | 0 | logfile |
✔ | 8G3K | 29700 | 2023-11-13 | 2023-02-08 | 2.2 | 2.34 | 2.21 | 2.3 | 0.002 | 0.36 | 0.0 | 0.03 | 9.98 | 0.00 | 2.348 | 3.50 | 0.00 | 0.7 | 99.3 | 0.0 | 5.07 | 0.46 | 0.82 | 4.79 | 2.3 | 0.002 | 0.47 | 0.0 | 0.03 | 17.12 | 0.00 | 2.333 | 3.72 | 0.41 | 0.7 | 99.3 | 0.0 | 4.78 | 1.17 | 0.47 | 0.83 | 4.98 | 2244 | 285 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PEP | 17634 | 2023-11-15 | 2023-06-14 | 3.33 | 4.07 | 3.32 | 3.4 | 0.004 | 0.72 | 0.0 | 0.05 | 28.82 | 0.01 | 2.092 | 9.54 | 0.13 | 1.9 | 98.1 | 0.0 | 0.85 | 0.92 | 0.87 | 1.55 | 3.4 | 0.004 | 0.61 | 0.0 | 0.03 | 27.74 | 0.00 | 2.090 | 9.99 | 0.00 | 3.2 | 96.8 | 0.0 | 1.70 | 2.45 | 0.94 | 0.91 | 1.37 | 13492 | 939 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 8C97 | 16504 | 2023-11-22 | 2023-01-21 | 4.07 | 4.81 | 4.16 | 4.0 | 0.002 | 0.39 | 0.0 | 0.03 | 13.88 | 0.00 | 1.904 | 5.95 | 0.00 | 4.6 | 95.2 | 0.2 | 0.72 | 0.80 | 0.75 | — | 4.0 | 0.003 | 0.57 | 0.0 | 0.03 | 16.16 | 0.00 | 1.794 | 18.96 | 0.00 | 7.2 | 92.6 | 0.2 | -1.40 | 0.75 | 0.80 | 0.82 | — | 36163 | 1077 | 12 | 1292 | 0 | 0 | 0 | logfile |
✔ | 8THU | 41272 | 2023-11-15 | 2023-07-18 | 3.1 | 3.86 | 3.08 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 28.74 | 0.01 | 1.528 | 5.35 | 0.00 | 2.2 | 97.8 | 0.0 | 1.40 | 0.93 | 0.89 | 2.77 | 3.2 | 0.004 | 0.57 | 0.0 | 0.03 | 28.76 | 0.00 | 2.179 | 8.06 | 0.49 | 2.6 | 97.4 | 0.0 | 2.67 | 0.27 | 0.94 | 0.90 | 1.87 | 11902 | 760 | 10 | 291 | 0 | 0 | 0 | logfile |
✔ | 8C2H | 16390 | 2023-11-15 | 2022-12-22 | 2.64 | 2.34 | 2.44 | 2.5 | 0.009 | 1.45 | 3.0 | 0.08 | 16.15 | 0.01 | 2.319 | 2.75 | 6.15 | 3.5 | 96.5 | 0.0 | -1.37 | 0.57 | 0.85 | 5.38 | 2.5 | 0.002 | 0.51 | 0.0 | 0.03 | 14.95 | 0.00 | 2.079 | 3.40 | 1.88 | 0.9 | 99.1 | 0.0 | 2.60 | 0.57 | 0.63 | 0.88 | 3.98 | 10071 | 1238 | 24 | 0 | 12 | 86 | 0 | logfile |
✔ | 8HR1 | 34956 | 2023-11-15 | 2022-12-14 | 3.02 | 2.38 | 2.94 | 3.0 | 0.010 | 0.80 | 0.0 | 0.05 | 26.31 | 0.01 | 2.255 | 8.44 | 0.16 | 3.1 | 96.9 | 0.0 | -5.09 | 0.84 | 0.81 | 2.82 | 2.9 | 0.004 | 0.60 | 0.0 | 0.03 | 28.44 | 0.00 | 2.134 | 10.54 | 0.63 | 2.5 | 97.5 | 0.0 | 1.84 | 1.26 | 0.89 | 0.88 | 1.77 | 12110 | 765 | 11 | 294 | 0 | 0 | 0 | logfile |
✔ | 7ABK | 11698 | 2023-11-13 | 2020-09-07 | 3.6 | 4.10 | 3.49 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 16.30 | 0.00 | 2.315 | 5.67 | 1.23 | 1.5 | 98.5 | 0.0 | 0.91 | 0.28 | 0.87 | 1.10 | 3.9 | 0.004 | 0.67 | 0.0 | 0.03 | 19.79 | 0.00 | 2.278 | 6.30 | 2.47 | 2.1 | 97.9 | 0.0 | 4.42 | 1.32 | 0.28 | 0.86 | 1.35 | 1574 | 196 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8J7R | 36046 | 2023-11-13 | 2023-04-28 | 3.7 | 3.03 | 3.63 | 3.4 | 0.010 | 1.34 | 0.0 | 0.13 | 19.10 | 0.00 | 2.220 | 9.29 | 6.85 | 2.5 | 97.5 | 0.0 | -0.13 | 0.69 | 0.76 | 0.98 | 3.0 | 0.003 | 0.54 | 0.0 | 0.03 | 16.99 | 0.00 | 2.230 | 10.14 | 0.46 | 2.1 | 97.9 | 0.0 | 3.04 | 1.40 | 0.71 | 0.80 | 1.07 | 4034 | 238 | 2 | 97 | 3 | 1 | 0 | logfile |
✔ | 7RX5 | 24725 | 2023-11-14 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.003 | 0.35 | 0.0 | 0.03 | 13.46 | 0.00 | 2.257 | 6.36 | 0.00 | 0.0 | 100.0 | 0.0 | 5.01 | 0.27 | 0.71 | 0.88 | 2.75 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 8B3Q | 15833 | 2023-11-19 | 2022-09-16 | 2.58 | 3.69 | 2.62 | 3.2 | 0.011 | 1.55 | 0.0 | 0.09 | 14.85 | 0.01 | 2.348 | 13.83 | 0.20 | 0.0 | 100.0 | 0.0 | -1.09 | 0.83 | 0.94 | 3.67 | 3.3 | 0.003 | 0.57 | 0.0 | 0.03 | 17.28 | 0.00 | 2.211 | 5.54 | 2.39 | 0.2 | 99.8 | 0.0 | 6.19 | 2.57 | 0.78 | 0.88 | -0.07 | 25095 | 3395 | 75 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZJ2 | 14739 | 2023-11-13 | 2022-04-08 | 3.32 | 3.56 | — | 3.6 | 0.014 | 2.21 | 0.0 | 0.08 | 15.29 | 0.01 | 2.548 | 0.00 | 0.00 | 2.3 | 97.7 | 0.0 | -3.75 | 0.47 | 0.78 | 4.64 | 3.6 | 0.005 | 0.75 | 0.0 | 0.03 | 16.47 | 0.00 | 2.160 | 16.93 | 0.57 | 3.1 | 96.9 | 0.0 | -3.55 | 3.51 | 0.44 | 0.74 | 4.77 | 3792 | 540 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JAX | 36137 | 2023-11-20 | 2023-05-07 | 3.27 | 3.67 | 3.22 | 3.4 | 0.005 | 0.83 | 0.0 | 0.04 | 18.67 | 0.00 | 1.139 | 7.77 | 0.36 | 2.4 | 97.4 | 0.2 | 3.04 | 0.82 | 0.90 | 1.34 | 3.4 | 0.003 | 0.63 | 0.0 | 0.03 | 18.87 | 0.00 | 2.080 | 7.79 | 0.21 | 2.2 | 97.7 | 0.2 | 3.88 | 0.28 | 0.83 | 0.90 | 0.95 | 31889 | 3858 | 48 | 0 | 36 | 0 | 0 | logfile |
✔ | 8T9F | 41109 | 2023-11-15 | 2023-06-23 | 2.6 | 3.21 | 2.66 | 3.0 | 0.004 | 0.59 | 0.0 | 0.04 | 25.28 | 0.00 | 1.469 | 4.80 | 0.00 | 2.1 | 97.9 | 0.0 | 1.11 | 0.88 | 0.87 | 2.94 | 3.0 | 0.003 | 0.53 | 0.0 | 0.03 | 26.39 | 0.00 | 2.126 | 7.24 | 1.54 | 2.0 | 98.0 | 0.0 | 1.66 | 0.50 | 0.88 | 0.87 | 2.40 | 13132 | 1031 | 12 | 244 | 1 | 0 | 0 | logfile |
✔ | 7PZD | 13727 | 2023-11-19 | 2021-10-12 | 3.6 | 3.77 | — | 3.8 | 0.010 | 1.24 | 0.0 | 0.08 | 16.79 | 0.01 | 2.384 | 6.88 | 1.27 | 5.6 | 94.4 | 0.0 | -3.73 | 0.68 | 0.81 | 1.20 | 3.8 | 0.003 | 0.66 | 0.0 | 0.03 | 18.63 | 0.01 | 2.264 | 8.97 | 0.35 | 5.5 | 94.5 | 0.0 | 1.01 | 5.63 | 0.67 | 0.82 | 0.60 | 13644 | 1656 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DFU | 27414 | 2023-11-18 | 2022-06-22 | 3.44 | 3.84 | 3.52 | 3.8 | 0.010 | 0.92 | 0.0 | 1.18 | 31.93 | 0.00 | 2.461 | 3.48 | 0.00 | 1.2 | 98.8 | 0.0 | 1.08 | 0.59 | 0.85 | 1.18 | 3.8 | 0.004 | 0.56 | 0.0 | 0.03 | 29.60 | 0.01 | 2.258 | 5.51 | 0.50 | 1.7 | 98.3 | 0.0 | 4.47 | 1.19 | 0.58 | 0.84 | 0.57 | 22710 | 2520 | 56 | 0 | 60 | 0 | 0 | logfile |
✔ | 6E9Z | 9021 | 2023-11-21 | 2018-08-01 | 3.4 | 3.50 | — | 3.4 | 0.011 | 0.85 | 0.0 | 0.05 | 10.27 | 0.01 | 1.132 | 13.25 | 0.00 | 4.5 | 95.1 | 0.4 | -6.29 | 0.55 | 0.77 | 3.60 | 3.5 | 0.003 | 0.62 | 0.0 | 0.03 | 15.68 | 0.00 | 1.947 | 8.04 | 0.12 | 2.5 | 97.5 | 0.0 | 2.56 | 1.91 | 0.57 | 0.82 | 1.30 | 32652 | 2025 | 9 | 0 | 0 | 0 | 16830 | logfile |