The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZFW | 14704 | 2023-11-15 | 2022-04-01 | 3.8 | 4.62 | 3.46 | 3.0 | 0.006 | 0.83 | 0.0 | 0.05 | 17.97 | 0.03 | 2.266 | 2.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.81 | — | 3.0 | 0.008 | 0.86 | 0.0 | 0.04 | 20.23 | 0.01 | 1.951 | 37.51 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.54 | 0.33 | 0.85 | — | 13188 | 0 | 1 | 615 | 0 | 0 | 0 | logfile |
✔ | 7SAM | 24952 | 2023-11-13 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 13.28 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.007 | 0.89 | 0.0 | 0.04 | 22.81 | 0.01 | 1.797 | 83.72 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.81 | 0.96 | 0.88 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 7URi | 26713 | 2023-11-13 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.008 | 1.44 | 0.0 | 0.07 | 24.06 | 0.01 | 2.073 | 23.33 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.06 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2023-11-13 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.16 | 0.0 | 0.05 | 22.80 | 0.01 | 1.988 | 29.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.68 | 0.15 | 0.54 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7XD7 | 33138 | 2023-11-14 | 2022-03-26 | 3.02 | 3.40 | — | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 14.03 | 0.00 | 1.736 | 0.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.86 | — | 3.1 | 0.007 | 0.67 | 0.0 | 0.04 | 15.11 | 0.00 | 1.866 | 7.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.19 | 0.92 | 0.92 | — | 8693 | 0 | 1 | 405 | 30 | 0 | 0 | logfile |
✔ | 7YGA | 33813 | 2023-11-14 | 2022-07-11 | 2.35 | 3.08 | 2.44 | 2.8 | 0.008 | 0.62 | 0.0 | 0.04 | 15.27 | 0.01 | 1.779 | 10.87 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.87 | — | 2.8 | 0.007 | 0.60 | 0.0 | 0.04 | 15.40 | 0.00 | 1.828 | 12.41 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.16 | 0.89 | 0.88 | — | 8692 | 0 | 3 | 407 | 8 | 0 | 0 | logfile |
✔ | 7YGC | 33815 | 2023-11-14 | 2022-07-11 | 2.65 | 3.28 | 2.77 | 2.9 | 0.007 | 0.50 | 0.0 | 0.03 | 14.78 | 0.00 | 1.778 | 12.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.83 | — | 2.9 | 0.004 | 0.55 | 0.0 | 0.03 | 15.37 | 0.00 | 1.949 | 13.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.47 | 0.92 | 0.91 | — | 8690 | 0 | 3 | 407 | 6 | 0 | 0 | logfile |
✔ | 7T6E | 25714 | 2023-11-13 | 2021-12-13 | 3.1 | 3.11 | — | 3.1 | 0.129 | 5.90 | 125.0 | 0.23 | 23.20 | 0.02 | 2.041 | 30.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.87 | — | 3.1 | 0.122 | 5.61 | 134.0 | 0.36 | 21.80 | 0.02 | 2.082 | 31.46 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.19 | 0.66 | 0.90 | — | 3480 | 0 | 60 | 0 | 300 | 0 | 0 | logfile |
✔ | 8DST | 27688 | 2023-11-13 | 2022-07-22 | 3.2 | 2.71 | 2.73 | 3.4 | 0.046 | 2.10 | 0.0 | 0.03 | 22.27 | 0.00 | 2.205 | 41.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.44 | 0.57 | — | 2.4 | 0.136 | 9.30 | 191.0 | 0.34 | 28.93 | 0.03 | 1.065 | 133.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.16 | 0.55 | 0.80 | — | 3078 | 0 | 54 | 0 | 270 | 0 | 0 | logfile |
✔ | 6PoM | 20416 | 2023-11-13 | 2019-07-04 | 4.9 | 5.01 | — | 5.0 | 0.003 | 0.64 | 0.0 | 0.03 | 17.29 | 0.00 | 2.075 | 3.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.61 | 0.64 | — | 5.0 | 0.010 | 1.29 | 0.0 | 0.06 | 21.60 | 0.01 | 1.918 | 61.40 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.76 | 0.75 | 0.80 | — | 4937 | 0 | 2 | 230 | 0 | 0 | 0 | logfile |
✔ | 7YGB | 33814 | 2023-11-14 | 2022-07-11 | 2.62 | 3.15 | 2.70 | 2.9 | 0.007 | 0.52 | 0.0 | 0.03 | 14.47 | 0.00 | 2.079 | 13.50 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.84 | — | 2.9 | 0.007 | 0.64 | 0.0 | 0.04 | 15.02 | 0.00 | 1.838 | 13.89 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.90 | 0.91 | — | 8738 | 0 | 5 | 407 | 54 | 0 | 0 | logfile |
✔ | 6oDJ | 20021 | 2023-11-19 | 2019-03-26 | 3.5 | 3.75 | — | 3.7 | 0.009 | 1.50 | 0.0 | 0.07 | 11.32 | 0.01 | 2.438 | 2.03 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.81 | 0.81 | — | 3.7 | 0.012 | 1.73 | 0.0 | 0.06 | 7.96 | 0.00 | 2.090 | 10.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.82 | 0.83 | — | 25415 | 0 | 17 | 0 | 5083 | 0 | 0 | logfile |
✔ | 7UVT | 26816 | 2023-11-15 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 16.13 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.72 | 0.0 | 0.04 | 18.00 | 0.01 | 1.911 | 21.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.46 | 0.77 | 0.77 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 7EZ2 | 31386 | 2023-11-14 | 2021-06-01 | 3.05 | 2.80 | — | 3.0 | 0.005 | 0.56 | 0.0 | 0.03 | 13.94 | 0.00 | 1.809 | 0.92 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.69 | 0.81 | — | 3.0 | 0.007 | 0.85 | 0.0 | 0.05 | 15.80 | 0.01 | 1.484 | 7.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.04 | 0.73 | 0.89 | — | 8698 | 0 | 3 | 406 | 31 | 0 | 0 | logfile |
✔ | 7XD3 | 33134 | 2023-11-14 | 2022-03-26 | 4.05 | 4.16 | — | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 16.04 | 0.00 | 1.960 | 1.21 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.74 | — | 3.9 | 0.007 | 0.80 | 0.0 | 0.04 | 17.33 | 0.01 | 1.680 | 17.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.79 | 0.87 | 0.82 | — | 9062 | 0 | 1 | 423 | 28 | 0 | 0 | logfile |
✔ | 7XD4 | 33135 | 2023-11-14 | 2022-03-26 | 3.89 | 4.13 | — | 3.8 | 0.003 | 0.59 | 0.0 | 0.03 | 15.73 | 0.00 | 1.880 | 1.73 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.73 | — | 3.8 | 0.007 | 0.78 | 0.0 | 0.04 | 17.52 | 0.01 | 1.755 | 18.36 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.84 | 0.87 | 0.78 | — | 9062 | 0 | 1 | 423 | 28 | 0 | 0 | logfile |
✔ | 7YCG | 33738 | 2023-11-14 | 2022-07-01 | 3.18 | 4.71 | 3.37 | 3.5 | 0.002 | 0.50 | 0.0 | 0.03 | 14.85 | 0.00 | 1.893 | 15.83 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.94 | 0.84 | — | 3.5 | 0.007 | 0.67 | 0.0 | 0.04 | 15.91 | 0.00 | 1.847 | 33.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.95 | 0.90 | — | 8661 | 0 | 2 | 404 | 4 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2023-11-20 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.47 | 0.00 | 2.110 | 23.19 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 7YG9 | 33812 | 2023-11-14 | 2022-07-11 | 2.68 | 3.47 | 2.76 | 2.8 | 0.005 | 0.51 | 0.0 | 0.03 | 15.25 | 0.00 | 1.804 | 13.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.86 | 0.81 | — | 2.8 | 0.006 | 0.61 | 0.0 | 0.04 | 15.66 | 0.00 | 1.870 | 18.05 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.39 | 0.92 | 0.92 | — | 8630 | 0 | 3 | 404 | 8 | 0 | 0 | logfile |
✔ | 7YCi | 33740 | 2023-11-14 | 2022-07-01 | 2.98 | 4.31 | 3.09 | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 14.96 | 0.00 | 1.521 | 15.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.93 | 0.84 | — | 3.3 | 0.005 | 0.62 | 0.0 | 0.03 | 16.16 | 0.00 | 1.852 | 24.59 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.93 | 0.95 | 0.90 | — | 8474 | 0 | 2 | 395 | 4 | 0 | 0 | logfile |