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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8EAK | 27979 | 2023-11-18 | 2022-08-29 | 2.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24218 | 3008 | 17 | 9 | 14 | 12 | 0 | logfile |
✘ | 6SPG | 10285 | 2023-11-21 | 2019-09-01 | 3.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -5.03 | — | — | 2.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | -2.63 | — | — | — | 2.05 | 141963 | 5779 | 58 | 4526 | 172 | 0 | 0 | logfile |
✘ | 7Ji3 | 22343 | 2023-11-13 | 2020-07-22 | 3.46 | 4.28 | — | 4.0 | 0.005 | 0.79 | 0.0 | 0.05 | 13.46 | 0.01 | 2.365 | 6.77 | 0.00 | 3.6 | 96.4 | 0.0 | -5.13 | 0.64 | 0.72 | 2.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6000 | 777 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 8EP0 | 28494 | 2023-11-18 | 2022-10-04 | 4.9 | 6.49 | 5.04 | 5.3 | 0.004 | 0.79 | 0.0 | 0.05 | 12.19 | 0.01 | 2.237 | 11.79 | 0.00 | 3.6 | 96.4 | 0.0 | 0.06 | 0.70 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24408 | 3372 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 8A1Y | 15093 | 2023-11-20 | 2022-06-02 | 3.3 | 3.70 | 3.51 | 3.7 | 0.004 | 0.54 | 0.0 | 0.04 | 15.64 | 0.00 | 2.049 | 3.87 | 0.06 | 2.0 | 98.0 | 0.0 | 1.28 | 0.59 | 0.75 | 1.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30045 | 1920 | 11 | 0 | 14 | 0 | 14864 | logfile |
✘ | 8HF2 | 34710 | 2023-11-13 | 2022-11-09 | 4.14 | 5.08 | 4.11 | 4.8 | 0.012 | 1.04 | 0.0 | 0.05 | 14.20 | 0.00 | 2.264 | 15.84 | 0.00 | 5.1 | 94.9 | 0.0 | -4.39 | 0.57 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4660 | 600 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 8DCX | 27330 | 2023-11-14 | 2022-06-17 | 2.8 | 3.32 | 3.33 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 14.71 | 0.00 | 2.195 | 13.47 | 0.00 | 5.4 | 94.6 | 0.1 | -0.04 | 0.48 | 0.60 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9627 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7CRR | 30457 | 2023-11-19 | 2020-08-14 | 3.48 | 3.61 | — | 3.5 | 0.007 | 0.75 | 0.0 | 0.04 | 27.67 | 0.00 | 2.037 | 12.56 | 1.56 | 10.2 | 89.8 | 0.0 | -5.14 | 0.74 | 0.82 | 2.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14839 | 1002 | 11 | 336 | 4 | 0 | 0 | logfile |
✘ | 7XR6 | 33408 | 2023-11-15 | 2022-05-09 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10199 | 1272 | 6 | 0 | 39 | 0 | 0 | logfile |
✘ | 6L4U | 0835 | 2023-11-15 | 2019-10-21 | 2.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62199 | 5075 | 72 | 0 | 557 | 156 | 0 | logfile |
✘ | 5GJW | 9515 | 2023-11-18 | 2016-07-02 | 3.9 | 4.02 | — | 4.0 | 0.012 | 1.51 | 20.0 | 0.08 | 11.56 | 0.01 | 1.844 | 12.82 | 1.50 | 12.8 | 85.5 | 1.7 | -5.28 | 0.55 | 0.80 | 1.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21561 | 2676 | 14 | 0 | 29 | 0 | 0 | logfile |
✘ | 6Z0U | 11023 | 2023-11-20 | 2020-05-11 | 2.9 | 2.99 | — | 2.9 | 0.007 | 0.73 | 0.0 | 0.05 | 13.19 | 0.01 | 2.040 | 10.02 | 0.52 | 6.5 | 93.5 | 0.0 | -3.59 | 0.78 | 0.89 | 4.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 87288 | 10896 | 72 | 0 | 24 | 1392 | 0 | logfile |
✘ | 7XT8 | 33442 | 2023-11-16 | 2022-05-16 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16812 | 1055 | 5 | 0 | 8 | 0 | 8287 | logfile |
✘ | 6RKD | 4907 | 2023-11-19 | 2019-04-30 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25290 | 3234 | 24 | 0 | 90 | 0 | 0 | logfile |
✘ | 8ERT | 28560 | 2023-11-20 | 2022-10-12 | 3.3 | 3.67 | 3.52 | 3.7 | 0.003 | 0.59 | 0.0 | 0.04 | 14.14 | 0.01 | 2.203 | 10.41 | 0.00 | 8.1 | 91.9 | 0.1 | 0.22 | 0.70 | 0.81 | 1.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16359 | 1995 | 21 | 0 | 0 | 0 | 0 | logfile |
✘ | 8AXN | 15702 | 2023-11-21 | 2022-08-31 | 3.34 | 3.51 | 3.30 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 9.93 | 0.00 | 2.125 | 6.78 | 3.52 | 5.4 | 94.6 | 0.0 | -0.25 | 0.76 | 0.84 | 2.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 94656 | 11704 | 64 | 0 | 0 | 0 | 0 | logfile |
✘ | 5GUP | 9539 | 2023-11-14 | 2016-08-30 | 4.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 109982 | 13895 | 107 | 0 | 77 | 0 | 0 | logfile |
✘ | 8EAH | 27976 | 2023-11-20 | 2022-08-29 | 2.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28500 | 3534 | 18 | 11 | 16 | 15 | 0 | logfile |
✘ | 7UVW | 26818 | 2023-11-20 | 2022-05-02 | 2.37 | 2.60 | — | 2.5 | 0.005 | 0.65 | 1.0 | 0.04 | 15.61 | 0.02 | 2.091 | 4.76 | 2.30 | 2.6 | 97.2 | 0.1 | 0.61 | 0.91 | 0.91 | 4.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 138233 | 5512 | 54 | 4442 | 1 | 0 | 0 | logfile |
✘ | 6LSR | 0963 | 2023-11-21 | 2020-01-20 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 141172 | 7581 | 57 | 3757 | 246 | 7 | 0 | logfile |