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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6TAX | 10429 | 2023-12-16 | 2019-10-31 | 3.2 | 2.63 | — | 1.9 | 0.009 | 1.13 | 0.0 | 0.06 | 11.28 | 0.01 | 2.065 | 5.46 | 0.46 | 9.5 | 90.3 | 0.2 | -4.10 | 0.88 | 0.80 | 3.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35235 | 4349 | 1 | 0 | 71 | 0 | 0 | logfile |
✔ | 6FN1 | 4281 | 2023-12-09 | 2018-02-02 | 3.58 | 3.73 | — | 3.7 | 0.009 | 1.43 | 0.0 | 0.08 | 11.92 | 0.01 | 2.115 | 8.23 | 0.58 | 6.4 | 93.4 | 0.2 | -3.97 | 0.67 | 0.77 | 2.49 | 3.7 | 0.004 | 0.82 | 0.0 | 0.05 | 14.81 | 0.00 | 2.137 | 11.33 | 0.51 | 5.3 | 94.7 | 0.1 | -0.34 | 0.65 | 0.73 | 0.79 | 1.91 | 12739 | 1627 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 6KQ4 | 0750 | 2023-12-09 | 2019-08-16 | 2.3 | 3.29 | — | 3.0 | 0.007 | 0.65 | 0.0 | 0.06 | 13.31 | 0.00 | 2.167 | 3.58 | 0.37 | 4.3 | 95.7 | 0.0 | -3.29 | 0.85 | 0.87 | 4.30 | 2.9 | 0.003 | 0.71 | 1.0 | 0.13 | 15.66 | 0.00 | 1.980 | 4.58 | 0.41 | 3.6 | 96.4 | 0.0 | 1.50 | 0.79 | 0.84 | 0.89 | 3.93 | 62206 | 3936 | 24 | 0 | 24 | 0 | 31222 | logfile |
✔ | 6GVE | 0071 | 2023-12-16 | 2018-06-20 | 3.9 | 4.13 | 3.97 | 4.0 | 0.010 | 0.99 | 0.0 | 0.06 | 10.44 | 0.01 | 2.133 | 7.04 | 0.11 | 4.2 | 95.8 | 0.0 | -3.72 | 0.77 | 0.75 | 1.99 | 4.0 | 0.005 | 0.78 | 0.0 | 0.05 | 14.72 | 0.00 | 2.069 | 19.43 | 0.68 | 6.3 | 93.7 | 0.0 | -1.02 | 1.31 | 0.82 | 0.83 | 1.70 | 33412 | 4272 | 24 | 0 | 8 | 0 | 0 | logfile |
✔ | 7K0M | 22602 | 2023-12-11 | 2020-09-04 | 2.9 | 3.38 | — | 3.3 | 0.005 | 0.69 | 0.0 | 0.04 | 12.97 | 0.00 | 2.218 | 4.70 | 0.00 | 2.3 | 97.7 | 0.0 | 1.05 | 0.62 | 0.79 | 3.49 | 3.3 | 0.002 | 0.46 | 0.0 | 0.04 | 15.16 | 0.00 | 2.230 | 4.92 | 1.24 | 2.1 | 97.9 | 0.0 | 1.36 | 0.38 | 0.63 | 0.80 | 2.94 | 18578 | 2342 | 14 | 0 | 16 | 0 | 0 | logfile |
✔ | 6N4R | 0342 | 2023-12-10 | 2018-11-20 | 4.2 | 4.09 | 4.16 | 4.1 | 0.008 | 1.07 | 0.0 | 0.06 | 10.26 | 0.01 | 2.222 | 4.60 | 0.23 | 6.8 | 93.2 | 0.0 | -3.27 | 0.66 | 0.76 | — | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 12.63 | 0.00 | 2.154 | 11.44 | 0.12 | 5.9 | 94.1 | 0.0 | -0.61 | 0.84 | 0.64 | 0.77 | — | 15444 | 1942 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZ6 | 24752 | 2023-12-14 | 2021-08-27 | 4.4 | 4.29 | — | 4.5 | 0.005 | 0.93 | 0.0 | 0.05 | 10.73 | 0.01 | 2.217 | 4.67 | 0.46 | 4.6 | 95.4 | 0.0 | -4.26 | 0.54 | 0.48 | — | 4.2 | 0.004 | 0.75 | 0.0 | 0.04 | 13.00 | 0.00 | 2.039 | 17.55 | 0.00 | 5.4 | 94.6 | 0.0 | -0.84 | 1.59 | 0.64 | 0.76 | — | 27922 | 3538 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 8G9o | 29873 | 2023-12-11 | 2023-02-21 | 4.4 | 5.72 | 4.20 | 4.0 | 0.008 | 0.58 | 0.0 | 0.04 | 19.81 | 0.00 | 2.042 | 4.86 | 0.00 | 4.7 | 95.3 | 0.0 | 1.15 | 0.88 | 0.74 | — | 4.0 | 0.002 | 0.53 | 0.0 | 0.04 | 17.03 | 0.00 | 1.220 | 9.50 | 0.00 | 4.4 | 95.6 | 0.0 | 1.09 | 0.94 | 0.91 | 0.81 | — | 18504 | 1054 | 7 | 46 | 5 | 0 | 9023 | logfile |
✔ | 6KQJ | 0752 | 2023-12-09 | 2019-08-18 | 2.54 | 3.61 | — | 3.1 | 0.018 | 1.17 | 0.0 | 0.06 | 16.99 | 0.00 | 1.899 | 8.79 | 0.00 | 7.3 | 92.7 | 0.0 | -4.78 | 0.87 | 0.88 | 3.91 | 3.2 | 0.005 | 0.74 | 1.0 | 0.12 | 15.36 | 0.00 | 1.771 | 6.66 | 0.37 | 3.5 | 96.5 | 0.0 | 0.66 | 0.79 | 0.84 | 0.86 | 3.76 | 63373 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 7YR6 | 34047 | 2023-12-07 | 2022-08-09 | 4.8 | 5.13 | 4.65 | 4.7 | 0.004 | 0.88 | 0.0 | 0.05 | 25.60 | 0.00 | 2.291 | 7.11 | 3.30 | 15.1 | 84.9 | 0.0 | -5.39 | 0.81 | 0.74 | — | 4.7 | 0.004 | 0.75 | 0.0 | 0.04 | 25.67 | 0.01 | 2.168 | 36.10 | 0.00 | 23.6 | 76.4 | 0.0 | -5.36 | 0.80 | 0.82 | 0.80 | — | 4248 | 220 | 5 | 118 | 0 | 0 | 0 | logfile |
✔ | 7XY6 | 33512 | 2023-12-08 | 2022-05-31 | 2.99 | 2.39 | 3.08 | 2.2 | 0.004 | 0.54 | 0.0 | 0.04 | 15.70 | 0.00 | 2.224 | 5.28 | 0.13 | 2.5 | 97.5 | 0.0 | 0.93 | 0.79 | 0.79 | 2.46 | 2.2 | 0.003 | 0.55 | 0.0 | 0.04 | 16.56 | 0.00 | 2.232 | 5.71 | 2.52 | 2.2 | 97.8 | 0.0 | 1.04 | 0.34 | 0.78 | 0.80 | 2.39 | 7044 | 895 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8E2J | 27838 | 2023-12-08 | 2022-08-15 | 3.44 | 3.67 | 3.24 | 3.4 | 0.003 | 0.63 | 0.0 | 0.03 | 15.86 | 0.01 | 2.271 | 3.43 | 2.70 | 2.3 | 97.7 | 0.0 | -0.36 | 0.44 | 0.67 | 0.61 | 3.4 | 0.003 | 0.50 | 0.0 | 0.03 | 17.42 | 0.00 | 2.179 | 11.91 | 0.00 | 1.2 | 98.8 | 0.0 | 3.70 | 1.69 | 0.45 | 0.67 | 1.22 | 6012 | 346 | 4 | 0 | 114 | 0 | 2694 | logfile |
✔ | 6KPH | 0746 | 2023-12-09 | 2019-08-15 | 2.41 | 3.45 | — | 3.2 | 0.014 | 1.03 | 0.0 | 0.15 | 14.48 | 0.00 | 1.838 | 8.27 | 0.00 | 8.5 | 91.5 | 0.0 | -4.25 | 0.81 | 0.85 | 4.19 | 3.2 | 0.004 | 0.74 | 0.0 | 0.15 | 14.73 | 0.00 | 1.762 | 7.95 | 1.06 | 4.2 | 95.8 | 0.0 | -0.01 | 0.81 | 0.80 | 0.86 | 4.16 | 62832 | 3936 | 24 | 0 | 48 | 0 | 31212 | logfile |
✔ | 7K0P | 22606 | 2023-12-11 | 2020-09-04 | 3.1 | 3.68 | — | 3.6 | 0.005 | 0.71 | 0.0 | 0.04 | 13.77 | 0.00 | 2.183 | 5.21 | 0.00 | 2.5 | 97.5 | 0.0 | 0.92 | 0.69 | 0.82 | 3.20 | 3.6 | 0.004 | 0.55 | 0.0 | 0.04 | 15.01 | 0.00 | 2.173 | 5.24 | 0.05 | 2.8 | 97.2 | 0.0 | 1.23 | 0.31 | 0.68 | 0.83 | 2.76 | 18572 | 2342 | 14 | 0 | 15 | 0 | 0 | logfile |
✔ | 6oT1 | 20191 | 2023-12-15 | 2019-05-02 | 3.5 | 4.13 | 3.54 | 3.9 | 0.007 | 1.01 | 0.0 | 0.06 | 14.67 | 0.01 | 2.015 | 6.65 | 0.72 | 8.9 | 91.1 | 0.0 | -4.15 | 0.80 | 0.85 | 2.29 | 3.9 | 0.004 | 0.70 | 0.0 | 0.04 | 15.44 | 0.00 | 2.176 | 10.90 | 0.33 | 7.1 | 92.9 | 0.0 | -1.96 | 0.54 | 0.80 | 0.84 | 2.06 | 32247 | 3867 | 75 | 0 | 156 | 0 | 0 | logfile |
✔ | 8F3E | 28848 | 2023-12-13 | 2022-11-10 | 3.09 | 3.38 | 3.21 | 3.4 | 0.003 | 0.52 | 0.0 | 0.04 | 9.85 | 0.00 | 2.213 | 7.20 | 2.91 | 1.9 | 98.1 | 0.0 | 1.77 | 0.61 | 0.64 | 1.05 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 15.62 | 0.00 | 2.070 | 10.09 | 0.40 | 1.8 | 98.2 | 0.0 | 1.68 | 1.75 | 0.63 | 0.80 | 1.92 | 23627 | 3095 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W6i | 21556 | 2023-12-14 | 2020-03-17 | 3.5 | 3.77 | — | 3.6 | 0.007 | 0.86 | 0.0 | 0.05 | 15.80 | 0.00 | 1.813 | 12.00 | 0.85 | 13.2 | 86.7 | 0.2 | -4.61 | 0.83 | 0.85 | 2.29 | 3.6 | 0.004 | 0.68 | 0.0 | 0.04 | 16.76 | 0.00 | 2.150 | 9.56 | 0.96 | 9.6 | 90.3 | 0.1 | -1.42 | 0.55 | 0.83 | 0.85 | 1.86 | 28168 | 3580 | 13 | 0 | 38 | 0 | 0 | logfile |
✔ | 7UK5 | 26575 | 2023-12-08 | 2022-03-31 | 2.76 | 3.16 | 2.85 | 3.1 | 0.004 | 0.58 | 0.0 | 0.04 | 12.96 | 0.01 | 2.139 | 7.69 | 0.00 | 3.1 | 96.9 | 0.0 | 1.44 | 0.62 | 0.85 | 3.74 | 3.1 | 0.002 | 0.51 | 0.0 | 0.04 | 14.52 | 0.00 | 2.343 | 8.62 | 0.95 | 2.3 | 97.7 | 0.0 | 2.74 | 0.32 | 0.53 | 0.82 | 3.12 | 8000 | 1036 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 6WMP | 21850 | 2023-12-12 | 2020-04-21 | 2.98 | 3.16 | — | 3.1 | 0.011 | 0.93 | 0.0 | 0.06 | 18.69 | 0.01 | 1.965 | 9.61 | 12.01 | 13.6 | 86.2 | 0.2 | -5.30 | 0.72 | 0.83 | 2.98 | 3.1 | 0.003 | 0.66 | 0.0 | 0.04 | 18.79 | 0.00 | 1.975 | 8.03 | 7.39 | 9.1 | 90.8 | 0.1 | -2.15 | 0.46 | 0.72 | 0.84 | 2.44 | 22296 | 2879 | 9 | 47 | 3 | 0 | 0 | logfile |
✔ | 6KPJ | 0748 | 2023-12-09 | 2019-08-15 | 2.56 | 3.82 | — | 3.3 | 0.014 | 0.94 | 0.0 | 0.06 | 13.40 | 0.00 | 1.218 | 8.38 | 0.00 | 6.7 | 93.3 | 0.0 | -4.33 | 0.85 | 0.86 | 3.83 | 3.3 | 0.003 | 0.71 | 1.0 | 0.13 | 14.09 | 0.00 | 1.141 | 6.20 | 0.41 | 2.7 | 97.3 | 0.0 | 1.27 | 0.70 | 0.85 | 0.87 | 3.52 | 62845 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |