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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3J80 | 2764 | 2023-12-13 | 2014-08-28 | 3.75 | 3.87 | 3.84 | 3.8 | 0.007 | 1.36 | 43.0 | 0.11 | 25.36 | 0.01 | 1.747 | 9.35 | 13.53 | 12.2 | 83.2 | 4.6 | -2.33 | 0.79 | 0.86 | 0.90 | 3.7 | 0.005 | 0.83 | 0.0 | 0.04 | 23.93 | 0.01 | 1.743 | 24.24 | 1.17 | 12.1 | 86.4 | 1.4 | -1.98 | 1.63 | 0.78 | 0.82 | 0.73 | 77716 | 5039 | 41 | 1779 | 70 | 0 | 0 | logfile |
✔ | 3J81 | 2763 | 2023-12-14 | 2014-08-29 | 4.0 | 4.19 | — | 4.0 | 0.007 | 1.30 | 64.0 | 0.10 | 25.18 | 0.01 | 1.076 | 7.72 | 12.47 | 11.6 | 83.5 | 4.9 | -2.31 | 0.79 | 0.84 | — | 4.0 | 0.005 | 0.82 | 0.0 | 0.04 | 24.12 | 0.01 | 1.762 | 25.48 | 0.98 | 11.6 | 86.9 | 1.5 | -1.98 | 2.08 | 0.79 | 0.82 | — | 83760 | 5686 | 48 | 1876 | 84 | 0 | 0 | logfile |
✔ | 3J89 | 6123 | 2023-12-08 | 2014-10-07 | 3.6 | 2.21 | — | 3.5 | 0.022 | 1.64 | 0.0 | 0.10 | 11.97 | 0.01 | 2.578 | 2.11 | 0.00 | 3.5 | 96.5 | 0.0 | -0.96 | 0.83 | 0.81 | 0.77 | 3.2 | 0.004 | 0.53 | 0.0 | 0.03 | 20.53 | 0.00 | 2.099 | 9.53 | 1.50 | 1.4 | 98.6 | 0.0 | 2.80 | 1.98 | 0.81 | 0.79 | 0.39 | 9025 | 551 | 19 | 0 | 0 | 0 | 4598 | logfile |
✔ | 3J8A | 6124 | 2023-12-10 | 2014-10-08 | 3.7 | 3.90 | — | 3.8 | 0.006 | 1.27 | 0.0 | 0.05 | 14.88 | 0.01 | 2.145 | 19.64 | 6.28 | 11.2 | 87.4 | 1.4 | -5.31 | 0.73 | 0.80 | 2.48 | 3.8 | 0.005 | 0.85 | 0.0 | 0.05 | 16.48 | 0.00 | 1.896 | 16.54 | 1.49 | 7.6 | 91.5 | 0.8 | -2.43 | 1.23 | 0.72 | 0.83 | 1.71 | 15800 | 1835 | 12 | 0 | 280 | 0 | 0 | logfile |
✘ | 3J8H | 2807 | 2023-12-08 | 2014-10-26 | 3.8 | 3.95 | — | 3.8 | 0.006 | 1.31 | 4.0 | 0.05 | 10.89 | 0.01 | 1.488 | 33.49 | 2.47 | 5.3 | 92.8 | 1.9 | -2.06 | 0.65 | 0.64 | 1.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111160 | 12796 | 12 | 0 | 2276 | 0 | 0 | logfile |
✔ | 3J8i | 6179 | 2023-12-10 | 2014-11-06 | 4.7 | 4.79 | — | 4.7 | 0.018 | 1.67 | 0.0 | 0.11 | 19.47 | 0.01 | 2.125 | 76.17 | 14.53 | 6.4 | 87.5 | 6.1 | -1.59 | 0.66 | 0.76 | — | 4.7 | 0.003 | 0.92 | 0.0 | 0.04 | 14.37 | 0.00 | 2.050 | 17.08 | 0.00 | 11.4 | 88.1 | 0.5 | -1.97 | 1.76 | 0.64 | 0.70 | — | 14800 | 1875 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 3J94 | 6204 | 2023-12-12 | 2014-12-05 | 4.2 | 2.69 | — | 3.1 | 0.009 | 1.97 | 0.0 | 0.07 | 17.14 | 0.01 | 1.261 | 31.36 | 5.87 | 5.0 | 93.0 | 2.0 | 2.31 | 0.83 | 0.77 | — | 2.6 | 0.003 | 0.78 | 0.0 | 0.04 | 14.66 | 0.00 | 1.741 | 16.33 | 0.00 | 4.7 | 94.8 | 0.5 | 0.72 | 2.61 | 0.85 | 0.80 | — | 21509 | 2895 | 12 | 0 | 11 | 0 | 0 | logfile |
✔ | 3J9C | 6224 | 2023-12-13 | 2014-12-25 | 2.9 | 3.02 | — | 3.1 | 0.005 | 1.11 | 0.0 | 0.05 | 14.41 | 0.00 | 2.277 | 7.02 | 6.13 | 4.8 | 95.2 | 0.0 | -0.81 | 0.74 | 0.87 | 2.67 | 3.0 | 0.004 | 0.61 | 0.0 | 0.05 | 16.49 | 0.00 | 2.143 | 7.80 | 3.35 | 3.0 | 97.0 | 0.0 | 0.21 | 1.52 | 0.76 | 0.87 | 3.18 | 23296 | 2961 | 7 | 0 | 14 | 0 | 0 | logfile |
✔ | 3J9D | 6239 | 2023-12-08 | 2015-01-09 | 3.3 | 2.70 | — | 3.4 | 0.027 | 2.04 | 0.0 | 0.08 | 20.57 | 0.01 | 2.034 | 23.66 | 24.92 | 8.2 | 89.6 | 2.2 | -3.64 | 0.81 | 0.89 | 2.90 | 3.3 | 0.022 | 0.83 | 0.0 | 0.04 | 17.52 | 0.00 | 2.197 | 15.77 | 0.60 | 7.4 | 91.9 | 0.7 | -1.61 | 2.37 | 0.75 | 0.84 | 2.85 | 6086 | 746 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 3J9E | 6240 | 2023-12-07 | 2015-01-10 | 3.3 | 2.66 | — | 3.3 | 0.032 | 3.28 | 0.0 | 0.09 | 21.31 | 0.02 | 1.223 | 20.81 | 24.26 | 9.8 | 87.3 | 2.9 | -3.41 | 0.77 | 0.88 | 3.26 | 3.3 | 0.004 | 0.78 | 0.0 | 0.04 | 17.71 | 0.00 | 2.103 | 10.58 | 0.46 | 7.9 | 91.5 | 0.6 | 0.80 | 1.24 | 0.72 | 0.85 | 3.33 | 4098 | 520 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9J | 5778 | 2023-12-12 | 2015-02-02 | 3.275 | 3.52 | 3.19 | 3.6 | 0.015 | 1.08 | 0.0 | 0.09 | 9.35 | 0.01 | 2.266 | 2.70 | 0.00 | 3.3 | 94.5 | 2.2 | -0.65 | 0.53 | 0.57 | 2.57 | 3.5 | 0.004 | 0.67 | 0.0 | 0.04 | 15.56 | 0.00 | 1.923 | 14.52 | 0.87 | 7.0 | 92.5 | 0.5 | 1.96 | 3.25 | 0.60 | 0.77 | 1.84 | 21068 | 1260 | 4 | 0 | 0 | 0 | 10624 | logfile |
✔ | 3J9P | 6267 | 2023-12-11 | 2015-02-14 | 4.24 | 2.59 | — | 4.1 | 0.009 | 1.85 | 4.0 | 0.07 | 17.68 | 0.01 | 2.113 | 26.35 | 4.64 | 10.2 | 88.2 | 1.6 | -3.58 | 0.73 | 0.78 | — | 4.2 | 0.004 | 0.99 | 0.0 | 0.04 | 13.80 | 0.00 | 2.128 | 17.46 | 0.00 | 8.5 | 90.8 | 0.7 | -1.73 | 1.17 | 0.73 | 0.80 | — | 16952 | 2240 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 3J9Q | 6270 | 2023-12-16 | 2015-02-17 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -5.24 | — | — | 2.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 99648 | 13224 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9S | 6272 | 2023-12-09 | 2015-02-19 | 2.6 | 3.83 | — | 3.5 | 0.020 | 1.80 | 0.0 | 0.12 | 18.55 | 0.01 | 0.216 | 25.10 | 6.86 | 1.3 | 98.0 | 0.8 | 1.97 | 0.68 | 0.76 | 3.15 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 17.43 | 0.00 | 1.145 | 9.20 | 1.43 | 1.5 | 98.5 | 0.0 | 1.37 | 1.90 | 0.70 | 0.89 | 3.19 | 9813 | 1191 | 3 | 0 | 15 | 315 | 0 | logfile |
✔ | 3J9W | 6306 | 2023-12-13 | 2015-03-16 | 3.9 | 3.93 | — | 3.8 | 0.010 | 1.50 | 0.0 | 0.03 | 23.30 | 0.02 | 1.433 | 8.85 | 0.26 | 6.0 | 92.0 | 2.0 | -1.66 | 0.74 | 0.72 | 0.72 | 3.8 | 0.004 | 0.73 | 0.0 | 0.04 | 23.95 | 0.00 | 2.007 | 18.34 | 1.42 | 7.6 | 91.8 | 0.6 | -0.46 | 1.35 | 0.80 | 0.85 | 1.06 | 135425 | 5661 | 54 | 4675 | 0 | 0 | 0 | logfile |
✔ | 3J9X | 6310 | 2023-12-12 | 2015-03-21 | 3.8 | 3.84 | — | 3.8 | 0.014 | 1.24 | 0.0 | 0.08 | 14.92 | 0.02 | 2.369 | 3.42 | 0.48 | 2.8 | 95.6 | 1.6 | -0.65 | 0.51 | 0.57 | 0.45 | 3.7 | 0.004 | 0.74 | 0.0 | 0.04 | 17.10 | 0.01 | 2.091 | 21.00 | 0.41 | 2.2 | 97.8 | 0.0 | 1.85 | 1.19 | 0.63 | 0.78 | 1.95 | 70702 | 7424 | 60 | 696 | 0 | 0 | 0 | logfile |
✘ | 3JA8 | 6338 | 2023-12-15 | 2015-05-09 | 3.8 | 3.83 | — | 3.8 | 0.014 | 1.57 | 0.0 | 0.06 | 10.98 | 0.01 | 1.749 | 29.23 | 0.37 | 7.9 | 91.0 | 1.1 | -4.26 | 0.68 | 0.80 | 2.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29838 | 3786 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 3JAC | 6343 | 2023-12-10 | 2015-06-05 | 4.8 | 6.42 | — | 9.4 | 0.007 | 1.81 | 3.0 | 0.07 | 10.64 | 0.03 | 1.020 | 57.64 | 4.17 | 5.0 | 90.3 | 4.8 | 1.36 | 0.42 | 0.40 | — | 9.1 | 0.012 | 1.69 | 0.0 | 0.06 | 13.69 | 0.01 | 1.923 | 77.11 | 0.00 | 27.1 | 71.7 | 1.2 | -5.31 | 3.69 | 0.54 | 0.61 | — | 15741 | 1716 | 3 | 0 | 1038 | 0 | 0 | logfile |
✔ | 3JAD | 6344 | 2023-12-09 | 2015-06-08 | 3.9 | 2.16 | — | 3.8 | 0.008 | 1.33 | 0.0 | 0.06 | 10.08 | 0.00 | 2.250 | 16.87 | 0.43 | 2.7 | 97.3 | 0.0 | -2.13 | 0.68 | 0.72 | 0.33 | 2.6 | 0.003 | 0.77 | 0.0 | 0.04 | 12.67 | 0.00 | 2.232 | 17.03 | 0.52 | 4.0 | 96.0 | 0.0 | 0.19 | 1.23 | 0.70 | 0.77 | 0.49 | 12705 | 1685 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 3JAE | 6345 | 2023-12-10 | 2015-06-08 | 3.9 | 2.88 | — | 3.5 | 0.006 | 1.26 | 0.0 | 0.05 | 9.72 | 0.01 | 2.202 | 13.69 | 0.00 | 0.9 | 99.1 | 0.0 | -1.69 | 0.70 | 0.74 | 1.87 | 3.2 | 0.003 | 0.87 | 0.0 | 0.04 | 13.58 | 0.00 | 2.154 | 15.18 | 0.33 | 2.6 | 97.4 | 0.0 | 0.11 | 1.49 | 0.72 | 0.82 | 1.55 | 12825 | 1690 | 10 | 0 | 10 | 0 | 0 | logfile |