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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6ZLQ | 11272 | 2023-12-16 | 2020-07-01 | 3.3 | 3.41 | — | 3.3 | 0.009 | 0.74 | 0.0 | 0.04 | 17.49 | 0.00 | 0.983 | 15.93 | 8.48 | 3.6 | 96.4 | 0.0 | -3.01 | 0.81 | 0.83 | 1.76 | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 18.12 | 0.00 | 1.266 | 15.10 | 0.74 | 1.0 | 99.0 | 0.0 | 3.43 | 0.70 | 0.80 | 0.84 | 1.08 | 33823 | 4185 | 38 | 0 | 16 | 0 | 0 | logfile |
✔ | 6YSL | 10899 | 2023-12-09 | 2020-04-22 | 3.5 | 3.58 | 3.41 | 3.5 | 0.006 | 1.17 | 0.0 | 0.06 | 12.21 | 0.01 | 2.232 | 5.93 | 0.47 | 9.0 | 90.9 | 0.1 | -4.73 | 0.58 | 0.72 | 1.19 | 3.5 | 0.005 | 0.92 | 0.0 | 0.05 | 16.74 | 0.00 | 2.157 | 17.90 | 0.84 | 7.7 | 92.3 | 0.0 | -1.07 | 1.18 | 0.60 | 0.72 | 1.10 | 10128 | 1324 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EJA | 31157 | 2023-12-08 | 2021-04-01 | 3.6 | 4.27 | — | 4.1 | 0.005 | 0.85 | 2.0 | 0.06 | 13.82 | 0.00 | 1.533 | 17.71 | 0.11 | 6.0 | 94.0 | 0.0 | -0.43 | 0.70 | 0.80 | 1.56 | 4.1 | 0.003 | 0.83 | 0.0 | 0.04 | 15.90 | 0.00 | 2.170 | 17.48 | 0.32 | 5.3 | 94.6 | 0.1 | -1.02 | 0.68 | 0.71 | 0.81 | 1.26 | 8584 | 1097 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7TPG | 26054 | 2023-12-07 | 2022-01-25 | 3.23 | 3.54 | — | 3.5 | 0.003 | 1.06 | 0.0 | 0.04 | 13.80 | 0.00 | 2.078 | 7.39 | 0.20 | 3.5 | 96.5 | 0.0 | 0.79 | 0.63 | 0.78 | 2.30 | 3.5 | 0.003 | 0.57 | 0.0 | 0.04 | 16.06 | 0.00 | 2.224 | 7.39 | 0.80 | 3.9 | 96.1 | 0.0 | 0.40 | 2.28 | 0.63 | 0.81 | 2.07 | 4777 | 626 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7LHL | 23345 | 2023-12-11 | 2021-01-25 | 3.6 | 3.89 | — | 3.8 | 0.008 | 0.90 | 1.0 | 0.05 | 14.57 | 0.00 | 2.027 | 14.41 | 0.65 | 9.4 | 90.6 | 0.0 | -4.21 | 0.77 | 0.84 | 1.72 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 15.99 | 0.00 | 2.161 | 9.67 | 0.23 | 6.9 | 93.1 | 0.0 | -0.94 | 0.59 | 0.76 | 0.83 | 1.38 | 17075 | 2285 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7F3U | 31441 | 2023-12-07 | 2021-06-17 | 4.0 | 4.20 | — | 4.2 | 0.006 | 0.89 | 0.0 | 0.05 | 11.59 | 0.00 | 2.275 | 21.93 | 0.00 | 8.6 | 91.4 | 0.0 | 2.22 | 0.60 | 0.78 | — | 4.2 | 0.003 | 0.89 | 0.0 | 0.04 | 15.55 | 0.00 | 2.169 | 16.88 | 0.35 | 6.0 | 94.0 | 0.0 | 3.72 | 1.30 | 0.59 | 0.77 | — | 4274 | 656 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7WGX | 32491 | 2023-12-13 | 2021-12-29 | 3.5 | 3.82 | — | 3.8 | 0.017 | 1.20 | 0.0 | 0.05 | 13.51 | 0.00 | 2.256 | 4.67 | 0.00 | 3.9 | 95.6 | 0.5 | -0.06 | 0.79 | 0.83 | 2.42 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25629 | 3165 | 21 | 0 | 60 | 0 | 0 | logfile |
✔ | 6VAL | 21142 | 2023-12-12 | 2019-12-17 | 3.87 | 4.25 | — | 4.2 | 0.005 | 0.74 | 0.0 | 0.04 | 14.40 | 0.00 | 2.052 | 9.70 | 1.02 | 6.0 | 94.0 | 0.0 | -3.34 | 0.66 | 0.73 | 2.18 | 4.2 | 0.003 | 0.69 | 0.0 | 0.04 | 16.72 | 0.00 | 2.162 | 6.98 | 0.79 | 2.6 | 97.4 | 0.0 | 1.34 | 2.45 | 0.68 | 0.79 | 1.56 | 21615 | 2827 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DSL | 30837 | 2023-12-08 | 2020-12-31 | 2.9 | 3.28 | — | 3.2 | 0.013 | 1.26 | 0.0 | 0.49 | 22.64 | 0.01 | 2.055 | 6.20 | 1.14 | 9.1 | 90.0 | 0.9 | -3.74 | 0.70 | 0.86 | 2.36 | 3.3 | 0.003 | 1.22 | 0.0 | 0.11 | 20.83 | 0.00 | 2.106 | 8.30 | 1.77 | 7.2 | 92.7 | 0.1 | 0.73 | 0.57 | 0.68 | 0.86 | 1.88 | 7522 | 935 | 8 | 0 | 12 | 8 | 0 | logfile |
✔ | 6oZC | 20224 | 2023-12-13 | 2019-05-15 | 3.79 | 4.35 | — | 4.2 | 0.023 | 1.84 | 0.0 | 0.11 | 10.25 | 0.01 | 2.303 | 1.05 | 0.00 | 3.1 | 96.2 | 0.7 | 0.38 | 0.79 | 0.82 | 2.11 | 4.2 | 0.004 | 0.77 | 0.0 | 0.04 | 13.80 | 0.00 | 2.091 | 13.74 | 0.58 | 5.8 | 94.1 | 0.1 | -0.45 | 1.61 | 0.78 | 0.81 | 1.57 | 25821 | 3027 | 54 | 0 | 186 | 0 | 0 | logfile |
✔ | 7TJV | 25933 | 2023-12-13 | 2022-01-17 | 3.6 | 3.57 | 3.65 | 3.6 | 0.003 | 0.66 | 0.0 | 0.05 | 12.84 | 0.01 | 1.836 | 2.06 | 0.00 | 1.9 | 98.1 | 0.0 | 0.21 | 0.62 | 0.81 | 2.69 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 16.27 | 0.00 | 1.907 | 8.55 | 0.38 | 2.1 | 97.9 | 0.0 | 0.69 | 0.59 | 0.62 | 0.82 | 1.89 | 23170 | 3110 | 12 | 0 | 10 | 0 | 0 | logfile |
✔ | 6A70 | 6991 | 2023-12-10 | 2018-06-29 | 3.6 | 4.21 | — | 3.7 | 0.009 | 1.20 | 0.0 | 0.06 | 12.37 | 0.01 | 2.200 | 4.77 | 1.28 | 9.2 | 90.7 | 0.1 | -6.41 | 0.52 | 0.57 | 0.70 | 3.8 | 0.005 | 0.86 | 0.0 | 0.05 | 14.75 | 0.00 | 2.095 | 13.74 | 0.53 | 8.3 | 91.7 | 0.0 | -1.40 | 1.21 | 0.58 | 0.73 | 0.81 | 15142 | 2086 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WGY | 32492 | 2023-12-12 | 2021-12-29 | 4.0 | 4.56 | — | 4.2 | 0.008 | 0.77 | 0.0 | 0.05 | 15.64 | 0.01 | 2.104 | 7.65 | 0.00 | 5.5 | 94.2 | 0.3 | -0.80 | 0.80 | 0.77 | — | 4.2 | 0.003 | 0.57 | 0.0 | 0.04 | 14.49 | 0.00 | 2.033 | 9.37 | 0.12 | 4.7 | 95.0 | 0.3 | 0.15 | 0.46 | 0.84 | 0.84 | — | 22914 | 2879 | 14 | 0 | 31 | 0 | 0 | logfile |
✔ | 7L0R | 23101 | 2023-12-08 | 2020-12-12 | 4.2 | 4.12 | 4.05 | 4.0 | 0.007 | 1.37 | 2.0 | 0.08 | 13.58 | 0.01 | 2.106 | 10.15 | 1.05 | 6.6 | 93.4 | 0.0 | -3.44 | 0.61 | 0.66 | — | 4.0 | 0.004 | 0.82 | 0.0 | 0.05 | 13.15 | 0.00 | 2.102 | 21.16 | 0.13 | 4.7 | 95.3 | 0.0 | -0.35 | 3.45 | 0.62 | 0.74 | — | 6968 | 887 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T38 | 25651 | 2023-12-11 | 2021-12-07 | 3.8 | 4.03 | — | 4.0 | 0.004 | 0.78 | 0.0 | 0.04 | 13.60 | 0.01 | 2.319 | 4.19 | 0.39 | 3.1 | 96.9 | 0.0 | -1.24 | 0.68 | 0.81 | 1.54 | 4.0 | 0.002 | 0.55 | 0.0 | 0.04 | 15.45 | 0.00 | 2.262 | 6.56 | 0.44 | 4.0 | 96.0 | 0.0 | 1.62 | 1.56 | 0.70 | 0.83 | 1.38 | 19404 | 2432 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LGU | 23329 | 2023-12-09 | 2021-01-21 | 2.3 | 2.77 | — | 2.7 | 0.003 | 0.93 | 0.0 | 0.04 | 14.03 | 0.00 | 2.197 | 8.08 | 1.15 | 1.6 | 98.4 | 0.0 | 1.41 | 0.64 | 0.84 | 5.76 | 2.7 | 0.002 | 0.46 | 0.0 | 0.04 | 14.49 | 0.00 | 2.158 | 5.43 | 1.06 | 1.6 | 98.4 | 0.0 | 1.47 | 0.22 | 0.64 | 0.85 | 5.59 | 11597 | 1360 | 6 | 0 | 110 | 111 | 0 | logfile |
✔ | 7TKT | 25981 | 2023-12-10 | 2022-01-17 | 3.6 | 3.75 | 3.75 | 3.7 | 0.007 | 1.26 | 0.0 | 0.04 | 21.05 | 0.01 | 2.224 | 6.30 | 0.00 | 4.7 | 95.3 | 0.0 | 0.63 | 0.72 | 0.81 | 2.05 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 18.24 | 0.00 | 2.176 | 7.54 | 0.07 | 4.9 | 95.1 | 0.0 | 0.90 | 1.95 | 0.72 | 0.82 | 2.23 | 13252 | 1560 | 8 | 0 | 56 | 0 | 0 | logfile |
✔ | 7FB4 | 31514 | 2023-12-12 | 2021-07-08 | 3.4 | 4.08 | — | 3.9 | 0.005 | 0.71 | 0.0 | 0.05 | 14.05 | 0.00 | 2.164 | 12.36 | 0.08 | 9.3 | 90.7 | 0.0 | -4.07 | 0.79 | 0.82 | 2.10 | 3.9 | 0.004 | 0.63 | 0.0 | 0.04 | 15.51 | 0.00 | 2.145 | 10.50 | 0.21 | 7.8 | 92.2 | 0.0 | -1.53 | 0.50 | 0.77 | 0.81 | 1.71 | 21411 | 2746 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XE6 | 22144 | 2023-12-08 | 2020-06-12 | 4.53 | 4.61 | — | 4.5 | 0.011 | 1.40 | 2.0 | 0.07 | 14.63 | 0.01 | 1.098 | 10.14 | 1.05 | 11.3 | 87.4 | 1.2 | -4.98 | 0.52 | 0.76 | — | 4.5 | 0.003 | 0.77 | 0.0 | 0.04 | 13.13 | 0.00 | 2.128 | 13.39 | 0.00 | 9.8 | 89.7 | 0.5 | -1.57 | 1.21 | 0.53 | 0.74 | — | 6530 | 826 | 1 | 0 | 6 | 0 | 0 | logfile |
✔ | 7P4i | 13193 | 2023-12-09 | 2021-07-11 | 4.2 | 5.62 | — | 4.1 | 0.003 | 0.76 | 0.0 | 0.04 | 13.10 | 0.00 | 2.168 | 11.83 | 0.00 | 5.7 | 94.3 | 0.0 | -0.54 | 0.61 | 0.84 | — | 4.2 | 0.003 | 0.71 | 0.0 | 0.04 | 13.52 | 0.00 | 2.245 | 11.01 | 0.00 | 5.6 | 94.4 | 0.0 | 0.61 | 0.91 | 0.61 | 0.86 | — | 9510 | 1284 | 3 | 0 | 0 | 0 | 0 | logfile |