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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8WC3 | 37429 | 2024-01-18 | 2023-09-11 | 3.0 | 3.02 | 2.90 | 3.0 | 0.007 | 0.95 | 2.0 | 0.07 | 13.95 | 0.01 | 1.356 | 8.37 | 1.40 | 5.2 | 94.8 | 0.0 | -1.08 | 0.66 | 0.73 | 2.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8418 | 1119 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7K45 | 22660 | 2024-01-17 | 2020-09-14 | 3.7 | 3.90 | 3.76 | 3.9 | 0.014 | 1.42 | 0.0 | 0.08 | 9.35 | 0.01 | 2.568 | 0.35 | 0.00 | 2.2 | 97.8 | 0.0 | 0.92 | 0.79 | 0.78 | 4.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3038 | 419 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 8EWF | 28644 | 2024-01-18 | 2022-10-22 | 3.92 | 4.61 | 4.05 | 4.4 | 0.004 | 0.68 | 0.0 | 0.04 | 16.92 | 0.00 | 1.761 | 21.32 | 0.88 | 6.6 | 93.4 | 0.0 | -1.26 | 0.51 | 0.66 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 56534 | 3697 | 17 | 0 | 9 | 0 | 27869 | logfile |
✘ | 8P2S | 17373 | 2024-01-18 | 2023-05-16 | 2.4 | 2.06 | 2.43 | 1.8 | 0.003 | 0.54 | 0.0 | 0.04 | 12.82 | 0.00 | 2.120 | 8.76 | 3.01 | 4.7 | 95.2 | 0.1 | 0.29 | 0.79 | 0.75 | 4.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9694 | 1201 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 8JSW | 36628 | 2024-01-17 | 2023-06-20 | 2.84 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2859 | 384 | 2 | 0 | 1 | 0 | 0 | logfile |
✘ | 7YUH | 34107 | 2024-01-19 | 2022-08-17 | 3.7 | 3.99 | 3.78 | 3.8 | 0.010 | 1.18 | 0.0 | 0.07 | 10.78 | 0.01 | 2.253 | 6.61 | 0.15 | 10.9 | 88.9 | 0.1 | -4.68 | 0.80 | 0.77 | 1.57 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12432 | 1596 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 8PBB | 17583 | 2024-01-20 | 2023-06-09 | 2.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13334 | 1684 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 8ERC | 28552 | 2024-01-17 | 2022-10-11 | 3.7 | 3.47 | 3.08 | 3.7 | 0.003 | 0.67 | 0.0 | 0.04 | 12.91 | 0.00 | 2.115 | 8.25 | 0.00 | 2.3 | 97.7 | 0.0 | 1.99 | 0.51 | 0.65 | 1.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3510 | 441 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 8JVM | 36677 | 2024-01-17 | 2023-06-28 | 3.86 | 4.13 | 3.89 | 3.9 | 0.006 | 1.08 | 1.0 | 0.06 | 14.54 | 0.01 | 2.138 | 27.03 | 1.75 | 16.3 | 82.1 | 1.6 | -3.56 | 0.64 | 0.54 | 0.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3726 | 498 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 8FYi | 29579 | 2024-01-20 | 2023-01-26 | 3.4 | 3.73 | 3.49 | 3.7 | 0.005 | 0.68 | 0.0 | 0.05 | 16.64 | 0.00 | 2.200 | 10.41 | 0.18 | 3.2 | 96.8 | 0.0 | -1.26 | 0.74 | 0.87 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15364 | 1844 | 19 | 0 | 56 | 0 | 0 | logfile |
✘ | 8HQZ | 34955 | 2024-01-20 | 2022-12-14 | 3.8 | 4.30 | 3.84 | 4.1 | 0.010 | 0.85 | 0.0 | 0.05 | 12.88 | 0.02 | 1.714 | 3.60 | 0.08 | 3.7 | 96.3 | 0.0 | -1.21 | 0.84 | 0.82 | 2.57 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 66381 | 8490 | 39 | 0 | 0 | 0 | 0 | logfile |
✘ | 8T6B | 41068 | 2024-01-17 | 2023-06-15 | 3.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2916 | 387 | 2 | 0 | 1 | 0 | 0 | logfile |
✘ | 8iJB | 35484 | 2024-01-18 | 2023-02-27 | 3.23 | 3.78 | 1.14 | 3.6 | 0.006 | 1.54 | 20.0 | 0.11 | 19.14 | 0.02 | 1.921 | 16.10 | 8.31 | 8.3 | 91.4 | 0.3 | -1.26 | 0.65 | 0.80 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8842 | 1136 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8HRL | 34977 | 2024-01-17 | 2022-12-15 | 2.8 | 3.03 | 2.84 | 3.1 | 0.004 | 0.73 | 0.0 | 0.05 | 18.12 | 0.01 | 2.124 | 7.19 | 1.59 | 4.7 | 95.3 | 0.0 | -1.16 | 0.64 | 0.73 | 1.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6412 | 791 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 8PoG | 17791 | 2024-01-17 | 2023-07-04 | 4.15 | 4.36 | 4.10 | 4.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.83 | 0.01 | 2.242 | 5.44 | 0.00 | 2.3 | 97.7 | 0.0 | 0.40 | 0.77 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4964 | 624 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 8WC7 | 37433 | 2024-01-18 | 2023-09-11 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8532 | 1122 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8JYP | 36729 | 2024-01-19 | 2023-07-03 | 3.38 | 4.15 | 3.49 | 3.8 | 0.003 | 0.62 | 0.0 | 0.05 | 14.74 | 0.00 | 2.291 | 5.18 | 0.00 | 2.5 | 97.5 | 0.0 | 0.39 | 0.84 | 0.84 | 2.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6627 | 795 | 7 | 0 | 14 | 0 | 0 | logfile |
✘ | 8JP0 | 36465 | 2024-01-17 | 2023-06-09 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5671 | 719 | 2 | 0 | 1 | 0 | 0 | logfile |
✘ | 5Lii | 4053 | 2024-01-17 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7DXA | 30902 | 2024-01-20 | 2021-01-18 | 3.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15162 | 1629 | 23 | 0 | 50 | 0 | 0 | logfile |