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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7ZL1 | 14774 | 2023-12-14 | 2022-04-13 | 2.5 | 2.06 | 2.45 | 2.4 | 0.007 | 0.88 | 0.0 | 0.06 | 14.81 | 0.01 | 2.033 | 2.59 | 0.65 | 5.7 | 93.3 | 1.0 | -0.02 | 0.73 | 0.86 | 6.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 27257 | 1720 | 24 | 0 | 8 | 379 | 13574 | logfile |
✘ | 8CE7 | 16600 | 2023-12-09 | 2023-02-01 | 2.7 | 2.34 | 2.46 | 2.7 | 0.010 | 1.47 | 12.0 | 0.09 | 13.19 | 0.01 | 0.000 | 16.71 | 3.33 | 9.0 | 91.0 | 0.0 | -3.63 | 0.44 | 0.73 | 6.36 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10512 | 1512 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 7Y7W | 33672 | 2023-12-07 | 2022-06-22 | 2.4 | 2.70 | 2.46 | 2.7 | 0.006 | 0.78 | 0.0 | 0.08 | 17.20 | 0.00 | 1.907 | 5.88 | 1.11 | 3.0 | 97.0 | 0.0 | 0.06 | 0.68 | 0.85 | 4.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4310 | 529 | 1 | 0 | 7 | 48 | 0 | logfile |
✘ | 7ZNJ | 14803 | 2023-12-16 | 2022-04-21 | 2.4 | 2.51 | 2.47 | 2.5 | 0.004 | 0.82 | 0.0 | 0.05 | 17.52 | 0.01 | 2.092 | 3.02 | 0.83 | 1.1 | 98.9 | 0.0 | -1.45 | 0.70 | 0.77 | 3.99 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35088 | 4242 | 36 | 36 | 12 | 0 | 0 | logfile |
✘ | 8EiR | 28162 | 2023-12-07 | 2022-09-15 | 2.49 | 3.15 | 2.50 | 3.0 | 0.005 | 0.81 | 0.0 | 0.05 | 16.40 | 0.01 | 1.960 | 4.05 | 2.61 | 2.2 | 97.4 | 0.3 | -1.27 | 0.86 | 0.84 | 4.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4870 | 632 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 8H87 | 34531 | 2023-12-08 | 2022-10-21 | 2.53 | 2.73 | 2.50 | 2.7 | 0.011 | 1.55 | 0.0 | 0.08 | 18.83 | 0.02 | 2.300 | 4.49 | 0.91 | 2.3 | 97.7 | 0.0 | -1.32 | 0.58 | 0.79 | 4.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7083 | 777 | 6 | 0 | 48 | 147 | 0 | logfile |
✘ | 7Y7H | 33665 | 2023-12-16 | 2022-06-22 | 2.51 | 2.14 | 2.51 | 2.4 | 0.010 | 0.74 | 0.0 | 0.05 | 21.67 | 0.03 | 1.859 | 5.32 | 0.00 | 4.0 | 95.9 | 0.1 | 0.09 | 0.57 | 0.81 | 4.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 141965 | 5591 | 64 | 4558 | 266 | 0 | 0 | logfile |
✘ | 8A1W | 15091 | 2023-12-15 | 2022-06-02 | 2.56 | 2.20 | 2.53 | 2.4 | 0.004 | 0.56 | 0.0 | 0.04 | 16.54 | 0.00 | 2.014 | 2.96 | 0.32 | 1.1 | 98.9 | 0.0 | 1.65 | 0.60 | 0.72 | 3.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30172 | 1908 | 16 | 0 | 16 | 289 | 14776 | logfile |
✘ | 8iHR | 35453 | 2023-12-13 | 2023-02-23 | 2.5 | 2.65 | 2.53 | 2.7 | 0.004 | 0.67 | 0.0 | 0.05 | 15.87 | 0.00 | 2.138 | 4.14 | 0.70 | 2.8 | 97.2 | 0.0 | -0.52 | 0.74 | 0.89 | 4.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24224 | 3200 | 16 | 0 | 16 | 0 | 0 | logfile |
✘ | 8AZS | 15770 | 2023-12-08 | 2022-09-06 | 2.9 | 2.78 | 2.55 | 2.8 | 0.011 | 1.50 | 0.0 | 0.12 | 16.09 | 0.01 | 0.017 | 1346.55 | 0.00 | 3.1 | 96.9 | 0.0 | -1.98 | 0.27 | 0.40 | 5.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9036 | 1224 | 36 | 0 | 0 | 0 | 0 | logfile |
✘ | 6NSK | 0499 | 2023-12-08 | 2019-01-24 | 2.7 | 2.82 | 2.55 | 3.1 | 0.009 | 1.11 | 0.0 | 0.06 | 14.60 | 0.01 | 2.213 | 4.78 | 0.00 | 3.6 | 96.4 | 0.0 | -3.23 | 0.62 | 0.77 | 5.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9096 | 1092 | 12 | 0 | 18 | 0 | 0 | logfile |
✘ | 7SCB | 25032 | 2023-12-17 | 2021-09-27 | 2.5 | 3.49 | 2.56 | 3.0 | 0.007 | 1.51 | 3.0 | 0.08 | 17.11 | 0.02 | 2.465 | 3.44 | 2.69 | 3.6 | 96.2 | 0.2 | -4.74 | 0.88 | 0.84 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37229 | 4743 | 54 | 0 | 25 | 0 | 0 | logfile |
✘ | 7Y7D | 33661 | 2023-12-16 | 2022-06-22 | 2.58 | 2.12 | 2.57 | 2.5 | 0.010 | 0.78 | 0.0 | 0.05 | 21.73 | 0.02 | 1.795 | 7.63 | 0.00 | 4.0 | 95.9 | 0.1 | -0.60 | 0.52 | 0.76 | 3.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 141917 | 5591 | 63 | 4557 | 260 | 0 | 0 | logfile |
✘ | 8C06 | 16355 | 2023-12-13 | 2022-12-16 | 2.7 | 2.32 | 2.57 | 2.7 | 0.003 | 0.76 | 0.0 | 0.05 | 13.59 | 0.01 | 2.333 | 2.28 | 0.00 | 5.5 | 94.5 | 0.0 | -1.51 | 0.67 | 0.75 | 2.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25324 | 3298 | 8 | 0 | 6 | 0 | 0 | logfile |
✘ | 8FGX | 29077 | 2023-12-09 | 2022-12-13 | 2.62 | 3.60 | 2.58 | 3.0 | 0.003 | 0.45 | 0.0 | 0.04 | 9.99 | 0.00 | 2.400 | 1.82 | 0.00 | 1.6 | 98.4 | 0.0 | 1.41 | 0.90 | 0.88 | 4.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9899 | 645 | 4 | 0 | 3 | 0 | 4873 | logfile |
✘ | 7XKR | 33265 | 2023-12-13 | 2022-04-20 | 2.6 | 3.37 | 2.59 | 3.0 | 0.003 | 0.54 | 0.0 | 0.04 | 12.97 | 0.00 | 2.006 | 3.17 | 0.00 | 1.6 | 98.4 | 0.0 | 1.93 | 0.86 | 0.90 | 3.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25246 | 3257 | 14 | 0 | 11 | 0 | 0 | logfile |
✘ | 8CYD | 27075 | 2023-12-14 | 2022-05-23 | 2.6 | 3.24 | 2.62 | 3.0 | 0.002 | 0.51 | 0.0 | 0.04 | 12.52 | 0.01 | 1.930 | 6.47 | 0.32 | 4.9 | 94.7 | 0.4 | 0.04 | 0.77 | 0.79 | 2.24 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28454 | 3663 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 8Foi | 29350 | 2023-12-16 | 2022-12-30 | 2.5 | 3.28 | 2.62 | 3.1 | 0.007 | 0.93 | 0.0 | 0.05 | 14.53 | 0.01 | 2.040 | 3.73 | 1.97 | 2.5 | 97.5 | 0.0 | -0.08 | 0.68 | 0.83 | 5.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35120 | 2120 | 21 | 0 | 81 | 0 | 16834 | logfile |
✘ | 8DM7 | 27529 | 2023-12-16 | 2022-07-08 | 2.49 | 3.10 | 2.62 | 2.7 | 0.005 | 0.84 | 0.0 | 0.06 | 13.32 | 0.01 | 2.296 | 3.28 | 0.58 | 1.6 | 98.4 | 0.0 | 0.44 | 0.79 | 0.78 | 2.55 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35165 | 4330 | 28 | 0 | 61 | 0 | 0 | logfile |
✘ | 7XJG | 33226 | 2023-12-10 | 2022-04-17 | 2.51 | 2.02 | 2.63 | 1.6 | 0.005 | 0.71 | 0.0 | 0.05 | 24.12 | 0.01 | 1.962 | 7.64 | 3.44 | 4.1 | 95.9 | 0.0 | -0.23 | 0.76 | 0.76 | 2.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13167 | 1066 | 12 | 216 | 2 | 0 | 0 | logfile |