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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7X6Q | 33025 | 2023-12-09 | 2022-03-08 | 4.5 | 4.41 | 4.61 | 4.3 | 0.009 | 0.73 | 0.0 | 0.06 | 9.96 | 0.00 | 2.197 | 0.93 | 0.01 | 3.2 | 96.7 | 0.2 | -0.87 | 0.78 | 0.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64472 | 8440 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 8FYB | 29563 | 2023-12-10 | 2023-01-25 | 3.1 | 3.33 | 3.15 | 3.3 | 0.004 | 0.60 | 0.0 | 0.04 | 20.88 | 0.00 | 2.211 | 12.15 | 0.09 | 3.6 | 96.4 | 0.0 | 0.63 | 0.71 | 0.78 | 2.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13486 | 1359 | 10 | 136 | 0 | 0 | 0 | logfile |
✘ | 8H38 | 34455 | 2023-12-17 | 2022-10-08 | 4.25 | 4.19 | 4.35 | 4.3 | 0.004 | 0.70 | 2.0 | 0.05 | 13.05 | 0.00 | 1.986 | 10.28 | 2.22 | 6.5 | 92.8 | 0.7 | -0.18 | 0.62 | 0.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37306 | 4639 | 15 | 0 | 4 | 0 | 0 | logfile |
✘ | 7MDY | 23784 | 2023-12-11 | 2021-04-06 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19595 | 1263 | 6 | 0 | 4 | 0 | 9862 | logfile |
✘ | 7N4E | 24148 | 2023-12-15 | 2021-06-04 | 3.8 | 3.85 | — | 3.8 | 0.004 | 0.72 | 0.0 | 0.04 | 17.75 | 0.01 | 1.705 | 13.32 | 3.45 | 4.3 | 95.7 | 0.0 | -0.65 | 0.78 | 0.77 | 1.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29822 | 3559 | 10 | 89 | 3 | 0 | 0 | logfile |
✘ | 7VGS | 31978 | 2023-12-10 | 2021-09-18 | 2.8 | 3.28 | — | 3.3 | 0.002 | 0.66 | 0.0 | 0.04 | 12.19 | 0.01 | 2.230 | 9.89 | 0.38 | 7.0 | 93.0 | 0.0 | -1.16 | 0.67 | 0.75 | 2.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9700 | 1254 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7XTC | 33446 | 2023-12-11 | 2022-05-16 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16301 | 1038 | 5 | 0 | 2 | 0 | 8097 | logfile |
✘ | 6Mi8 | 9126 | 2023-12-08 | 2018-09-19 | 4.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7139 | 911 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 7Y7W | 33672 | 2023-12-07 | 2022-06-22 | 2.4 | 2.70 | 2.46 | 2.7 | 0.006 | 0.78 | 0.0 | 0.08 | 17.20 | 0.00 | 1.907 | 5.88 | 1.11 | 3.0 | 97.0 | 0.0 | 0.06 | 0.68 | 0.85 | 4.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4310 | 529 | 1 | 0 | 7 | 48 | 0 | logfile |
✘ | 6XZ7 | 10655 | 2023-12-15 | 2020-02-03 | 2.1 | 2.05 | 2.12 | 2.1 | 0.010 | 0.84 | 1.0 | 0.05 | 22.59 | 0.04 | 1.564 | 6.31 | 3.26 | 2.8 | 96.8 | 0.4 | -2.20 | 0.41 | 0.69 | 5.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 94915 | 3351 | 45 | 3169 | 179 | 528 | 0 | logfile |
✘ | 7DCC | 30635 | 2023-12-16 | 2020-10-24 | 4.3 | 4.77 | — | 4.1 | 0.002 | 0.48 | 0.0 | 0.04 | 7.38 | 0.00 | 2.279 | 3.10 | 1.39 | 2.3 | 97.7 | 0.0 | -4.06 | 0.73 | 0.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35019 | 4485 | 9 | 0 | 0 | 0 | 0 | logfile |
✘ | 6JEo | 9807 | 2023-12-15 | 2019-02-06 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 94576 | 8774 | 88 | 0 | 504 | 0 | 0 | logfile |
✘ | 7oSE | 13048 | 2023-12-10 | 2021-06-08 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14882 | 1816 | 12 | 0 | 10 | 2 | 0 | logfile |
✘ | 7EQ9 | 31256 | 2023-12-09 | 2021-04-30 | 3.3 | 3.70 | 3.42 | 3.6 | 0.002 | 0.47 | 0.0 | 0.04 | 15.65 | 0.00 | 2.267 | 3.70 | 0.00 | 3.3 | 96.7 | 0.0 | 1.85 | 0.60 | 0.53 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62520 | 7620 | 60 | 0 | 0 | 0 | 0 | logfile |
✘ | 6RPK | 4977 | 2023-12-16 | 2019-05-14 | 2.84 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -3.71 | — | — | 2.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 101400 | 12060 | 60 | 0 | 0 | 0 | 0 | logfile |
✘ | 7SLP | 25197 | 2023-12-07 | 2021-10-24 | 4.1 | 4.19 | — | 4.2 | 0.008 | 1.22 | 1.0 | 0.07 | 18.74 | 0.01 | 2.221 | 7.09 | 1.77 | 4.2 | 95.3 | 0.5 | -3.76 | 0.62 | 0.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5176 | 561 | 4 | 37 | 0 | 0 | 0 | logfile |
✘ | 7XTA | 33444 | 2023-12-11 | 2022-05-16 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17478 | 1115 | 5 | 0 | 1 | 0 | 8707 | logfile |
✘ | 6PW9 | 20501 | 2023-12-08 | 2019-07-22 | 4.03 | 4.12 | — | 4.1 | 0.007 | 1.23 | 0.0 | 0.24 | 15.09 | 0.01 | 1.781 | 6.70 | 1.81 | 4.4 | 95.6 | 0.0 | -4.47 | 0.71 | 0.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8836 | 1075 | 5 | 0 | 3 | 0 | 0 | logfile |
✘ | 6Z0U | 11023 | 2023-12-14 | 2020-05-11 | 2.9 | 2.99 | — | 2.9 | 0.007 | 0.73 | 0.0 | 0.05 | 13.19 | 0.01 | 2.040 | 10.02 | 0.52 | 6.5 | 93.5 | 0.0 | -3.59 | 0.78 | 0.89 | 4.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 87288 | 10896 | 72 | 0 | 24 | 1392 | 0 | logfile |
✘ | 6Po1 | 20406 | 2023-12-07 | 2019-07-03 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53244 | 3407 | 20 | 0 | 18 | 0 | 26717 | logfile |