The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 5GKY | 9518 | 2023-12-08 | 2016-07-07 | 3.8 | 4.18 | — | 4.0 | 0.017 | 1.70 | 19.0 | 0.10 | 11.29 | 0.01 | 1.789 | 19.04 | 0.51 | 5.8 | 91.8 | 2.5 | -2.71 | 0.73 | 0.79 | 1.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111036 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 5GKZ | 9519 | 2023-12-08 | 2016-07-07 | 4.0 | 4.10 | — | 4.0 | 0.019 | 1.71 | 36.0 | 0.11 | 11.29 | 0.01 | 1.755 | 15.04 | 0.51 | 6.5 | 91.2 | 2.3 | -2.89 | 0.72 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111000 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 5GL0 | 9520 | 2023-12-08 | 2016-07-07 | 4.2 | 4.40 | — | 4.2 | 0.018 | 1.72 | 17.0 | 0.10 | 11.34 | 0.01 | 1.957 | 21.25 | 0.51 | 6.5 | 90.6 | 2.9 | -2.58 | 0.74 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111000 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 5GM6 | 9524 | 2023-12-08 | 2016-07-12 | 3.5 | 3.61 | — | 3.6 | 0.012 | 1.33 | 11.0 | 0.08 | 14.71 | 0.01 | 1.303 | 18.95 | 3.36 | 6.6 | 92.1 | 1.2 | -3.54 | 0.58 | 0.83 | 2.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 112064 | 12796 | 55 | 361 | 881 | 0 | 0 | logfile |
✘ | 5GMK | 9525 | 2023-12-13 | 2016-07-14 | 3.4 | 3.52 | — | 3.5 | 0.012 | 1.25 | 16.0 | 0.07 | 15.51 | 0.01 | 1.378 | 19.35 | 2.77 | 7.7 | 91.2 | 1.0 | -3.71 | 0.47 | 0.53 | 1.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 75273 | 8026 | 51 | 404 | 981 | 0 | 0 | logfile |
✘ | 5GUP | 9539 | 2023-12-08 | 2016-08-30 | 4.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 109982 | 13895 | 107 | 0 | 77 | 0 | 0 | logfile |
✘ | 5GW4 | 9540 | 2023-12-09 | 2016-09-08 | 4.7 | 4.89 | — | 4.8 | 0.001 | 0.42 | 0.0 | 0.04 | 7.26 | 0.00 | 2.187 | 6.49 | 0.00 | 4.3 | 95.6 | 0.1 | -3.58 | 0.77 | 0.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64544 | 8446 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 5GW5 | 9541 | 2023-12-09 | 2016-09-08 | 4.6 | 4.75 | — | 4.7 | 0.002 | 0.58 | 0.0 | 0.04 | 7.37 | 0.00 | 2.136 | 6.87 | 0.01 | 4.5 | 95.4 | 0.1 | -3.73 | 0.74 | 0.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64544 | 8446 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 5H1S | 9572 | 2023-12-15 | 2016-10-11 | 3.5 | 3.54 | — | 3.5 | 0.010 | 1.06 | 1.0 | 0.07 | 24.81 | 0.01 | 1.028 | 46.50 | 3.21 | 16.7 | 81.7 | 1.6 | -4.90 | 0.78 | 0.77 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 90825 | 3276 | 32 | 3018 | 0 | 0 | 0 | logfile |
✘ | 5LJV | 4062 | 2023-12-10 | 2016-07-21 | 3.64 | 3.75 | — | 3.7 | 0.030 | 2.85 | 85.0 | 0.16 | 18.81 | 0.02 | 2.070 | 21.28 | 11.82 | 7.4 | 89.7 | 2.9 | -4.53 | 0.71 | 0.84 | 2.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15000 | 1950 | 12 | 0 | 12 | 0 | 0 | logfile |
✘ | 5NiK | 3652 | 2023-12-16 | 2017-03-24 | 3.3 | 3.47 | — | 3.4 | 0.010 | 1.29 | 0.0 | 0.04 | 10.30 | 0.01 | 0.941 | 22.00 | 0.24 | 6.4 | 91.6 | 1.9 | -1.88 | 0.64 | 0.59 | 1.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35215 | 4582 | 11 | 0 | 0 | 0 | 0 | logfile |
✘ | 5oJQ | 3566 | 2023-12-08 | 2017-07-22 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -5.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 113346 | 14364 | 54 | 0 | 0 | 0 | 0 | logfile |
✘ | 5ooL | 3842 | 2023-12-16 | 2017-08-08 | 3.06 | 5.10 | 3.10 | 4.9 | 0.009 | 1.05 | 2.0 | 0.06 | 17.89 | 0.01 | 0.037 | 6.31 | 0.54 | 5.0 | 94.9 | 0.1 | -3.52 | 0.77 | 0.61 | 0.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 98998 | 8198 | 66 | 1497 | 124 | 0 | 0 | logfile |
✘ | 5T4D | 8354 | 2023-12-10 | 2016-08-29 | 3.0 | 3.12 | 2.96 | 3.1 | 0.010 | 0.81 | 0.0 | 0.05 | 9.48 | 0.00 | 2.120 | 12.34 | 0.26 | 4.4 | 95.6 | 0.0 | -2.69 | 0.75 | 0.79 | 4.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14876 | 1852 | 8 | 0 | 12 | 0 | 0 | logfile |
✘ | 5TAT | 8384 | 2023-12-10 | 2016-09-10 | 4.8 | 5.01 | 5.79 | 4.8 | 0.004 | 0.87 | 0.0 | 0.05 | 9.86 | 0.01 | 1.373 | 4.75 | 0.35 | 9.4 | 90.5 | 0.1 | -4.89 | 0.78 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 121452 | 13500 | 12 | 0 | 3716 | 0 | 0 | logfile |
✘ | 5TAV | 8386 | 2023-12-10 | 2016-09-10 | 4.8 | 4.96 | 5.58 | 4.7 | 0.004 | 0.89 | 4.0 | 0.05 | 9.84 | 0.01 | 1.373 | 4.75 | 0.39 | 9.7 | 90.1 | 0.2 | -4.80 | 0.77 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 121452 | 13500 | 12 | 0 | 3716 | 0 | 0 | logfile |
✘ | 5TAY | 8389 | 2023-12-10 | 2016-09-10 | 4.6 | 4.71 | 4.77 | 4.5 | 0.004 | 0.86 | 4.0 | 0.05 | 9.86 | 0.01 | 1.374 | 4.89 | 0.46 | 10.4 | 89.4 | 0.2 | -4.90 | 0.75 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 121276 | 13500 | 12 | 0 | 3712 | 0 | 0 | logfile |
✘ | 5UCY | 8539 | 2023-12-13 | 2016-12-22 | 4.6 | 4.99 | — | 4.6 | 0.011 | 1.21 | 3.0 | 0.06 | 13.21 | 0.01 | 0.244 | 89.25 | 0.68 | 11.3 | 88.3 | 0.5 | -4.47 | 0.50 | 0.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24990 | 2610 | 12 | 3 | 6 | 0 | 4452 | logfile |
✘ | 5UJZ | 8561 | 2023-12-16 | 2017-01-19 | 4.8 | 5.22 | — | 5.1 | 0.010 | 1.28 | 0.0 | 0.06 | 10.84 | 0.01 | 2.072 | 3.55 | 0.16 | 7.6 | 92.3 | 0.1 | -3.77 | 0.84 | 0.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33948 | 2196 | 21 | 0 | 33 | 0 | 16401 | logfile |
✘ | 5UK0 | 8562 | 2023-12-16 | 2017-01-19 | 4.8 | 5.42 | — | 5.2 | 0.010 | 1.26 | 0.0 | 0.06 | 10.83 | 0.01 | 2.096 | 3.58 | 0.16 | 8.3 | 91.6 | 0.1 | -3.58 | 0.84 | 0.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33948 | 2196 | 21 | 0 | 33 | 0 | 16401 | logfile |