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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7KUY | 23041 | 2024-01-20 | 2020-11-25 | 3.6 | 3.77 | — | 3.8 | 0.006 | 0.91 | 0.0 | 0.06 | 14.53 | 0.01 | 2.208 | 7.93 | 0.14 | 6.3 | 93.7 | 0.0 | -4.24 | 0.70 | 0.86 | 3.06 | 3.8 | 0.004 | 0.67 | 0.0 | 0.05 | 15.00 | 0.00 | 2.098 | 11.20 | 3.54 | 5.0 | 95.0 | 0.0 | -1.18 | 0.44 | 0.70 | 0.86 | 2.41 | 13633 | 1694 | 10 | 0 | 14 | 0 | 0 | logfile |
✔ | 8GVH | 34293 | 2024-01-19 | 2022-09-15 | 3.32 | 3.55 | 3.33 | 3.6 | 0.003 | 0.66 | 0.0 | 0.12 | 15.16 | 0.00 | 2.235 | 6.44 | 0.07 | 5.6 | 94.3 | 0.1 | -0.39 | 0.63 | 0.80 | 1.54 | 3.6 | 0.003 | 0.58 | 0.0 | 0.04 | 16.78 | 0.00 | 2.151 | 5.74 | 2.04 | 5.9 | 94.0 | 0.1 | 0.59 | 0.35 | 0.56 | 0.77 | 1.61 | 12602 | 1576 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8GV9 | 34288 | 2024-01-19 | 2022-09-14 | 3.06 | 3.27 | 3.06 | 3.3 | 0.004 | 0.69 | 0.0 | 0.05 | 16.24 | 0.01 | 2.028 | 6.06 | 0.23 | 5.0 | 94.8 | 0.2 | -0.09 | 0.65 | 0.82 | 1.61 | 3.3 | 0.004 | 0.57 | 0.0 | 0.04 | 17.21 | 0.00 | 2.052 | 5.17 | 3.31 | 5.2 | 94.6 | 0.2 | 0.38 | 0.25 | 0.63 | 0.81 | 1.54 | 12170 | 1532 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8EJC | 28177 | 2024-01-18 | 2022-09-16 | 3.0 | 3.01 | 3.04 | 3.1 | 0.006 | 0.64 | 0.0 | 0.04 | 13.37 | 0.00 | 2.199 | 9.48 | 0.00 | 3.6 | 96.4 | 0.0 | 1.20 | 0.69 | 0.84 | 3.08 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 15.89 | 0.00 | 2.174 | 9.30 | 2.55 | 3.6 | 96.4 | 0.0 | 1.15 | 0.34 | 0.69 | 0.85 | 2.34 | 8659 | 1132 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7N0C | 24103 | 2024-01-17 | 2021-05-25 | 3.4 | 3.71 | — | 3.7 | 0.009 | 1.00 | 0.0 | 0.05 | 15.74 | 0.01 | 2.180 | 6.79 | 0.00 | 1.3 | 98.7 | 0.0 | -3.80 | 0.72 | 0.80 | 2.48 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 16.41 | 0.00 | 1.118 | 9.40 | 3.80 | 5.5 | 94.5 | 0.0 | -1.33 | 1.16 | 0.75 | 0.83 | 1.90 | 6088 | 644 | 6 | 49 | 7 | 1 | 0 | logfile |
✔ | 6XDC | 22136 | 2024-01-17 | 2020-06-10 | 2.9 | 3.80 | — | 3.7 | 0.006 | 0.79 | 0.0 | 0.06 | 13.65 | 0.01 | 2.279 | 4.95 | 1.15 | 4.0 | 96.0 | 0.0 | -2.72 | 0.47 | 0.71 | 3.58 | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 15.03 | 0.00 | 2.198 | 9.09 | 2.87 | 4.2 | 95.8 | 0.0 | 1.02 | 1.67 | 0.44 | 0.69 | 3.31 | 3150 | 386 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AJQ | 11806 | 2024-01-18 | 2020-09-29 | 4.0 | 3.67 | 4.30 | 4.2 | 0.002 | 0.55 | 0.0 | 0.03 | 13.10 | 0.00 | 2.208 | 12.84 | 0.00 | 3.5 | 96.5 | 0.0 | -0.98 | 0.76 | 0.76 | — | 4.2 | 0.004 | 0.92 | 0.0 | 0.05 | 15.92 | 0.01 | 2.132 | 21.91 | 3.64 | 4.1 | 95.9 | 0.0 | 0.96 | 0.84 | 0.77 | 0.77 | — | 9210 | 1222 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y9V | 33693 | 2024-01-18 | 2022-06-26 | 3.2 | 3.43 | 3.15 | 3.4 | 0.013 | 1.21 | 6.0 | 0.06 | 10.86 | 0.01 | 2.057 | 4.79 | 0.48 | 5.1 | 94.9 | 0.0 | -5.91 | 0.62 | 0.83 | 3.18 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 13.59 | 0.00 | 2.168 | 7.41 | 3.13 | 3.8 | 96.2 | 0.0 | -0.24 | 1.21 | 0.63 | 0.85 | 2.61 | 7734 | 988 | 8 | 0 | 2 | 4 | 0 | logfile |
✔ | 7N0L | 24108 | 2024-01-17 | 2021-05-25 | 2.8 | 2.17 | — | 3.1 | 0.065 | 1.95 | 0.0 | 0.04 | 21.58 | 0.00 | 1.675 | 18.13 | 9.23 | 2.0 | 98.0 | 0.0 | -6.10 | 0.56 | 0.80 | 3.16 | 3.1 | 0.003 | 0.65 | 0.0 | 0.04 | 19.54 | 0.00 | 2.238 | 15.04 | 4.06 | 0.3 | 99.7 | 0.0 | 1.82 | 1.21 | 0.55 | 0.80 | 2.05 | 5270 | 626 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7EW7 | 31349 | 2024-01-19 | 2021-05-24 | 3.27 | 3.91 | — | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 13.52 | 0.00 | 2.016 | 6.73 | 0.71 | 3.6 | 96.4 | 0.0 | -2.17 | 0.56 | 0.74 | 2.49 | 3.9 | 0.002 | 0.54 | 0.0 | 0.04 | 15.75 | 0.00 | 2.136 | 7.29 | 2.74 | 3.6 | 96.4 | 0.0 | -0.40 | 1.27 | 0.60 | 0.78 | 1.98 | 9004 | 1144 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7TTi | 26116 | 2024-01-18 | 2022-02-01 | 3.5 | 3.76 | — | 3.8 | 0.008 | 0.63 | 0.0 | 0.04 | 16.78 | 0.01 | 1.990 | 50.92 | 0.28 | 7.7 | 92.3 | 0.0 | 1.88 | 0.46 | 0.65 | 2.20 | 3.8 | 0.004 | 0.76 | 0.0 | 0.05 | 15.07 | 0.01 | 2.240 | 9.30 | 6.46 | 6.5 | 93.5 | 0.0 | 0.76 | 0.56 | 0.62 | 0.78 | 2.01 | 7670 | 1084 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 7Eo2 | 31225 | 2024-01-18 | 2021-04-21 | 2.89 | 3.28 | — | 3.4 | 0.005 | 0.77 | 0.0 | 0.05 | 13.29 | 0.00 | 2.152 | 0.90 | 0.00 | 4.1 | 95.9 | 0.0 | -0.60 | 0.59 | 0.72 | 2.59 | 3.4 | 0.002 | 0.57 | 0.0 | 0.04 | 15.23 | 0.00 | 2.154 | 6.32 | 2.16 | 2.6 | 97.4 | 0.0 | 1.19 | 0.47 | 0.49 | 0.66 | 2.09 | 8865 | 1126 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8CTH | 26990 | 2024-01-17 | 2022-05-14 | 3.3 | 3.53 | 3.29 | 3.5 | 0.014 | 1.05 | 0.0 | 0.04 | 19.76 | 0.07 | 2.257 | 12.01 | 0.00 | 3.3 | 96.7 | 0.0 | -1.68 | 0.64 | 0.67 | 1.91 | 3.5 | 0.003 | 1.29 | 0.0 | 0.04 | 20.86 | 0.01 | 2.132 | 14.47 | 4.02 | 5.4 | 94.6 | 0.0 | -1.14 | 1.23 | 0.66 | 0.69 | 2.20 | 5544 | 495 | 4 | 74 | 0 | 0 | 0 | logfile |
✔ | 6XL6 | 22235 | 2024-01-17 | 2020-06-28 | 3.0 | 3.41 | — | 3.3 | 0.005 | 0.68 | 0.0 | 0.05 | 19.90 | 0.00 | 2.257 | 5.23 | 0.00 | 0.0 | 100.0 | 0.0 | -1.93 | 0.76 | 0.83 | 2.94 | 3.3 | 0.004 | 0.55 | 0.0 | 0.04 | 20.53 | 0.00 | 2.252 | 6.76 | 2.04 | 1.9 | 98.1 | 0.0 | 0.26 | 1.38 | 0.75 | 0.83 | 2.60 | 5456 | 536 | 6 | 46 | 4 | 0 | 0 | logfile |
✔ | 7B5C | 12025 | 2024-01-19 | 2020-12-03 | 3.7 | 3.81 | 3.61 | 3.8 | 0.005 | 0.86 | 0.0 | 0.05 | 15.21 | 0.01 | 2.239 | 7.43 | 0.78 | 5.9 | 94.1 | 0.0 | -3.64 | 0.62 | 0.77 | 1.51 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 16.48 | 0.01 | 2.087 | 11.03 | 2.03 | 5.8 | 94.2 | 0.0 | -0.43 | 0.60 | 0.62 | 0.77 | 1.21 | 11770 | 1436 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7SP7 | 25367 | 2024-01-18 | 2021-11-02 | 3.1 | 3.61 | — | 3.5 | 0.008 | 0.68 | 0.0 | 0.05 | 14.56 | 0.00 | 2.219 | 3.57 | 0.00 | 1.4 | 98.6 | 0.0 | 2.52 | 0.60 | 0.73 | 1.83 | 3.5 | 0.003 | 0.50 | 0.0 | 0.04 | 15.42 | 0.00 | 2.222 | 5.40 | 2.54 | 1.9 | 98.1 | 0.0 | 1.73 | 0.56 | 0.67 | 0.81 | 3.01 | 6052 | 739 | 4 | 1 | 4 | 0 | 0 | logfile |
✔ | 7WF7 | 32461 | 2024-01-18 | 2021-12-26 | 3.4 | 3.19 | — | 3.2 | 0.004 | 0.83 | 0.0 | 0.05 | 13.78 | 0.00 | 2.288 | 2.88 | 0.00 | 4.4 | 95.6 | 0.0 | -1.14 | 0.55 | 0.64 | 1.44 | 3.3 | 0.004 | 0.70 | 0.0 | 0.04 | 15.62 | 0.00 | 2.123 | 10.43 | 3.26 | 5.7 | 94.3 | 0.0 | -0.03 | 0.56 | 0.56 | 0.62 | 1.75 | 8136 | 1034 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7URG | 26712 | 2024-01-17 | 2022-04-21 | 3.46 | 3.69 | 3.49 | 3.7 | 0.002 | 0.50 | 0.0 | 0.04 | 15.44 | 0.00 | 2.229 | 4.69 | 0.00 | 3.5 | 96.5 | 0.0 | 0.73 | 0.69 | 0.75 | 2.59 | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 16.94 | 0.00 | 2.222 | 5.74 | 3.47 | 4.8 | 95.2 | 0.0 | 0.12 | 0.52 | 0.75 | 0.79 | 2.27 | 6260 | 802 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7SJR | 25164 | 2024-01-20 | 2021-10-18 | 3.8 | 3.91 | — | 3.8 | 0.005 | 0.79 | 0.0 | 0.04 | 17.63 | 0.01 | 1.895 | 13.38 | 0.08 | 8.9 | 91.1 | 0.0 | -1.61 | 0.77 | 0.83 | 1.72 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 18.95 | 0.00 | 2.070 | 8.91 | 2.50 | 6.0 | 94.0 | 0.0 | -0.21 | 1.12 | 0.76 | 0.83 | 0.77 | 13696 | 1713 | 4 | 35 | 3 | 0 | 0 | logfile |
✔ | 8HS3 | 34984 | 2024-01-18 | 2022-12-16 | 3.14 | 3.64 | 3.25 | 3.6 | 0.005 | 0.75 | 0.0 | 0.05 | 16.98 | 0.01 | 2.141 | 7.14 | 0.36 | 5.6 | 94.4 | 0.0 | -1.38 | 0.55 | 0.78 | 2.00 | 3.6 | 0.003 | 0.56 | 0.0 | 0.04 | 17.31 | 0.00 | 2.157 | 9.87 | 4.63 | 4.3 | 95.7 | 0.0 | -0.20 | 0.29 | 0.54 | 0.77 | 1.99 | 8258 | 1124 | 5 | 0 | 0 | 0 | 0 | logfile |