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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7CXR | 30495 | 2024-01-17 | 2020-09-02 | 3.4 | 3.32 | 3.43 | 3.7 | 0.007 | 0.87 | 1.0 | 0.06 | 16.56 | 0.00 | 2.199 | 12.99 | 3.39 | 6.6 | 93.1 | 0.3 | -2.27 | 0.52 | 0.54 | 1.33 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 18.31 | 0.00 | 2.256 | 10.95 | 3.39 | 3.6 | 96.4 | 0.0 | 2.26 | 1.52 | 0.58 | 0.61 | 1.62 | 5168 | 614 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VVM | 32144 | 2024-01-18 | 2021-11-06 | 3.2 | 2.40 | 3.19 | 3.2 | 0.015 | 1.76 | 0.0 | 0.09 | 13.51 | 0.00 | 2.200 | 6.43 | 0.60 | 5.2 | 94.8 | 0.0 | -1.17 | 0.60 | 0.71 | 2.55 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 16.06 | 0.00 | 2.116 | 8.61 | 2.98 | 3.3 | 96.7 | 0.0 | 0.71 | 0.55 | 0.65 | 0.72 | 2.25 | 8507 | 1133 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QEU | 13941 | 2024-01-17 | 2021-12-03 | 2.7 | 3.39 | — | 3.0 | 0.007 | 0.80 | 0.0 | 0.04 | 13.54 | 0.00 | 2.135 | 3.49 | 0.00 | 2.6 | 97.4 | 0.0 | 0.76 | 0.78 | 0.87 | 3.01 | 3.0 | 0.002 | 0.54 | 0.0 | 0.04 | 14.86 | 0.00 | 2.195 | 4.16 | 0.93 | 2.0 | 98.0 | 0.0 | 3.41 | 0.42 | 0.79 | 0.88 | 2.64 | 3002 | 359 | 6 | 0 | 6 | 7 | 0 | logfile |
✔ | 7Q6Z | 13860 | 2024-01-18 | 2021-11-09 | 3.59 | 3.59 | 3.63 | 3.6 | 0.008 | 0.69 | 0.0 | 0.04 | 14.58 | 0.00 | 1.945 | 7.30 | 0.00 | 4.8 | 95.2 | 0.0 | 1.64 | 0.56 | 0.72 | 2.00 | 3.7 | 0.004 | 1.04 | 0.0 | 0.04 | 15.29 | 0.00 | 1.961 | 9.63 | 1.36 | 5.1 | 94.9 | 0.0 | 1.67 | 0.38 | 0.56 | 0.72 | 1.78 | 9754 | 597 | 3 | 0 | 4 | 0 | 4784 | logfile |
✔ | 7WLC | 32581 | 2024-01-17 | 2022-01-13 | 4.0 | 4.24 | — | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 13.71 | 0.00 | 2.198 | 15.62 | 0.00 | 6.1 | 93.9 | 0.0 | -1.35 | 0.71 | 0.77 | — | 4.1 | 0.004 | 0.76 | 0.0 | 0.05 | 16.01 | 0.00 | 2.156 | 17.48 | 3.34 | 9.4 | 90.6 | 0.0 | -1.65 | 0.49 | 0.72 | 0.78 | — | 3307 | 430 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XQo | 22291 | 2024-01-17 | 2020-07-09 | 3.1 | 3.54 | — | 3.5 | 0.004 | 0.57 | 0.0 | 0.04 | 15.61 | 0.00 | 1.956 | 9.56 | 3.52 | 4.4 | 95.6 | 0.0 | -2.83 | 0.76 | 0.75 | 2.70 | 3.5 | 0.004 | 0.62 | 0.0 | 0.04 | 16.90 | 0.00 | 2.152 | 11.98 | 7.04 | 2.7 | 97.3 | 0.0 | 0.53 | 0.64 | 0.78 | 0.78 | 1.48 | 4301 | 560 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7X1R | 32947 | 2024-01-18 | 2022-02-24 | 3.9 | 3.98 | — | 3.9 | 0.007 | 0.75 | 0.0 | 0.05 | 14.25 | 0.00 | 2.205 | 9.01 | 0.25 | 2.3 | 97.7 | 0.0 | -0.91 | 0.74 | 0.82 | 1.82 | 3.9 | 0.006 | 0.72 | 0.0 | 0.05 | 17.16 | 0.00 | 2.234 | 12.11 | 5.01 | 5.3 | 94.7 | 0.0 | 0.06 | 1.76 | 0.75 | 0.83 | 2.01 | 7608 | 970 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7R7N | 24299 | 2024-01-17 | 2021-06-25 | 3.95 | 4.08 | 3.93 | 4.1 | 0.010 | 1.24 | 0.0 | 0.07 | 9.31 | 0.00 | 2.553 | 0.78 | 0.45 | 3.2 | 96.8 | 0.0 | 0.00 | 0.81 | 0.77 | 3.23 | 4.0 | 0.003 | 0.73 | 0.0 | 0.04 | 14.42 | 0.00 | 2.314 | 7.75 | 6.73 | 3.8 | 96.2 | 0.0 | -1.04 | 1.34 | 0.83 | 0.80 | 2.31 | 2790 | 391 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 6ZQi | 11364 | 2024-01-17 | 2020-07-09 | 3.8 | 4.13 | 3.63 | 4.1 | 0.002 | 0.56 | 0.0 | 0.04 | 12.44 | 0.00 | 2.336 | 6.03 | 1.12 | 3.1 | 96.9 | 0.0 | -2.14 | 0.67 | 0.78 | 0.85 | 4.1 | 0.005 | 0.83 | 0.0 | 0.05 | 15.84 | 0.00 | 2.186 | 12.87 | 5.03 | 6.2 | 93.8 | 0.0 | -0.79 | 0.65 | 0.69 | 0.81 | 1.24 | 5032 | 655 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7M5o | 23678 | 2024-01-19 | 2021-03-24 | 3.54 | 2.81 | 3.58 | 3.6 | 0.003 | 0.54 | 0.0 | 0.04 | 18.22 | 0.00 | 1.978 | 10.65 | 1.25 | 0.2 | 99.8 | 0.0 | -2.03 | 0.79 | 0.75 | 1.08 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 19.28 | 0.00 | 2.059 | 12.28 | 3.74 | 4.5 | 95.5 | 0.0 | 0.35 | 1.24 | 0.79 | 0.76 | 1.33 | 11648 | 655 | 3 | 37 | 1 | 0 | 5635 | logfile |
✔ | 8HHL | 34803 | 2024-01-17 | 2022-11-16 | 2.87 | 3.25 | 2.89 | 3.1 | 0.004 | 0.50 | 0.0 | 0.04 | 22.20 | 0.00 | 2.126 | 6.49 | 2.29 | 1.4 | 98.6 | 0.0 | 2.28 | 0.77 | 0.81 | 3.37 | 3.1 | 0.004 | 0.56 | 0.0 | 0.03 | 22.69 | 0.00 | 1.944 | 7.97 | 2.29 | 1.2 | 98.8 | 0.0 | 3.10 | 2.37 | 0.81 | 0.85 | 3.67 | 6971 | 592 | 6 | 111 | 4 | 0 | 0 | logfile |
✔ | 7F6G | 31479 | 2024-01-18 | 2021-06-25 | 2.9 | 3.07 | — | 3.0 | 0.009 | 0.98 | 0.0 | 0.08 | 13.90 | 0.00 | 2.197 | 4.74 | 0.65 | 3.0 | 97.0 | 0.0 | -0.57 | 0.67 | 0.78 | 2.90 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 15.60 | 0.00 | 2.058 | 6.05 | 2.80 | 3.0 | 97.0 | 0.0 | 0.73 | 1.10 | 0.66 | 0.81 | 2.14 | 8697 | 1061 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 7ZZ4 | 15034 | 2024-01-17 | 2022-05-25 | 2.63 | 3.04 | 2.56 | 2.2 | 0.008 | 1.05 | 0.0 | 0.05 | 18.14 | 0.00 | 2.035 | 5.21 | 0.27 | 3.3 | 96.7 | 0.0 | -0.79 | 0.86 | 0.84 | 4.14 | 2.2 | 0.004 | 1.18 | 1.0 | 0.05 | 17.59 | 0.00 | 1.514 | 10.15 | 2.12 | 3.5 | 96.5 | 0.0 | 0.75 | 0.26 | 0.87 | 0.85 | 4.11 | 3682 | 463 | 1 | 0 | 3 | 11 | 0 | logfile |
✔ | 7MK2 | 23884 | 2024-01-17 | 2021-04-21 | 3.8 | 3.60 | 3.84 | 3.6 | 0.004 | 0.69 | 0.0 | 0.04 | 14.23 | 0.00 | 2.228 | 8.87 | 0.00 | 7.7 | 92.3 | 0.0 | -1.60 | 0.63 | 0.77 | 0.81 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 16.16 | 0.00 | 2.216 | 8.59 | 2.62 | 5.1 | 94.9 | 0.0 | -0.62 | 1.43 | 0.62 | 0.76 | 0.79 | 5333 | 708 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8HHM | 34804 | 2024-01-17 | 2022-11-16 | 3.08 | 3.57 | 3.10 | 3.3 | 0.005 | 0.53 | 0.0 | 0.04 | 20.51 | 0.00 | 2.106 | 6.39 | 3.34 | 2.9 | 97.1 | 0.0 | 1.27 | 0.81 | 0.82 | 2.37 | 3.3 | 0.005 | 0.60 | 0.0 | 0.04 | 21.31 | 0.00 | 2.037 | 10.06 | 3.10 | 2.4 | 97.6 | 0.0 | 1.89 | 2.68 | 0.82 | 0.83 | 2.08 | 5558 | 516 | 7 | 72 | 2 | 0 | 0 | logfile |
✔ | 7QEV | 13942 | 2024-01-17 | 2021-12-03 | 2.9 | 3.46 | — | 3.1 | 0.009 | 0.86 | 0.0 | 0.05 | 13.68 | 0.00 | 2.164 | 5.92 | 0.00 | 4.3 | 95.7 | 0.0 | -0.15 | 0.79 | 0.86 | 3.19 | 3.1 | 0.003 | 0.66 | 0.0 | 0.04 | 16.15 | 0.00 | 2.144 | 6.70 | 1.17 | 2.4 | 97.6 | 0.0 | 2.12 | 1.66 | 0.79 | 0.86 | 2.48 | 3204 | 383 | 6 | 0 | 8 | 8 | 0 | logfile |
✔ | 7WLK | 32586 | 2024-01-18 | 2022-01-13 | 3.6 | 3.50 | — | 3.6 | 0.010 | 0.99 | 0.0 | 0.06 | 15.42 | 0.00 | 1.853 | 14.07 | 0.10 | 6.7 | 93.3 | 0.0 | 0.27 | 0.72 | 0.79 | 1.77 | 3.6 | 0.004 | 0.71 | 0.0 | 0.04 | 15.88 | 0.00 | 2.182 | 11.20 | 2.39 | 4.8 | 95.2 | 0.0 | 1.33 | 1.18 | 0.72 | 0.78 | 1.02 | 9461 | 1135 | 1 | 0 | 17 | 0 | 0 | logfile |
✔ | 6X4S | 22042 | 2024-01-17 | 2020-05-22 | 3.5 | 3.84 | — | 3.9 | 0.007 | 0.77 | 0.0 | 0.05 | 15.59 | 0.00 | 2.077 | 11.03 | 0.97 | 1.9 | 98.1 | 0.0 | 1.34 | 0.72 | 0.75 | 1.39 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 18.08 | 0.00 | 2.110 | 11.78 | 5.44 | 1.5 | 98.5 | 0.0 | 4.30 | 1.51 | 0.72 | 0.76 | 1.19 | 5373 | 706 | 9 | 0 | 1 | 0 | 0 | logfile |
✔ | 7ZZ0 | 15030 | 2024-01-17 | 2022-05-25 | 2.26 | 2.63 | 2.22 | 2.1 | 0.004 | 0.71 | 0.0 | 0.05 | 16.82 | 0.00 | 2.149 | 3.28 | 1.96 | 1.9 | 98.1 | 0.0 | -0.34 | 0.92 | 0.91 | 4.41 | 2.1 | 0.003 | 0.51 | 0.0 | 0.04 | 16.65 | 0.00 | 2.110 | 4.91 | 2.18 | 1.5 | 98.5 | 0.0 | 1.22 | 0.19 | 0.92 | 0.91 | 4.73 | 4387 | 541 | 1 | 0 | 2 | 84 | 0 | logfile |
✔ | 5G2Y | 3332 | 2024-01-20 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 21.31 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.00 | 0.0 | 0.05 | 27.65 | 0.01 | 1.932 | 71.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.94 | 0.89 | 0.79 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |