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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6XTB | 10618 | 2024-01-17 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.005 | 1.12 | 0.0 | 0.05 | 9.13 | 0.00 | 2.119 | 10.22 | 0.00 | 25.1 | 74.9 | 0.0 | -5.72 | 2.48 | 0.34 | 0.65 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q64 | 13851 | 2024-01-18 | 2021-11-05 | 2.76 | 2.81 | 2.66 | 2.9 | 0.014 | 1.34 | 0.0 | 0.09 | 10.20 | 0.01 | 2.276 | 7.23 | 3.83 | 8.3 | 91.7 | 0.0 | -6.01 | 0.58 | 0.78 | 3.39 | 2.8 | 0.005 | 1.25 | 1.0 | 0.05 | 14.68 | 0.00 | 2.155 | 12.46 | 6.17 | 5.3 | 94.7 | 0.0 | -5.67 | 0.74 | 0.59 | 0.86 | 3.75 | 7810 | 1100 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KWZ | 23059 | 2024-01-17 | 2020-12-02 | 3.2 | 3.41 | — | 3.4 | 0.006 | 0.80 | 0.0 | 0.05 | 12.48 | 0.00 | 2.271 | 14.29 | 0.00 | 7.3 | 92.7 | 0.0 | -5.51 | 0.47 | 0.81 | 4.47 | 3.4 | 0.008 | 0.98 | 0.0 | 0.05 | 15.41 | 0.01 | 2.167 | 22.34 | 3.18 | 19.9 | 80.1 | 0.0 | -5.58 | 0.99 | 0.48 | 0.85 | 4.46 | 4695 | 695 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2024-01-17 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HiA | 34813 | 2024-01-18 | 2022-11-19 | 4.9 | 4.49 | 2.13 | 9.6 | 0.001 | 0.36 | 0.0 | 0.05 | 15.83 | 0.00 | 2.251 | 1.11 | 2.86 | 12.1 | 87.6 | 0.2 | -4.39 | 0.47 | 0.07 | — | 9.4 | 0.009 | 0.98 | 0.0 | 0.05 | 15.73 | 0.01 | 2.082 | 32.36 | 4.76 | 19.0 | 81.0 | 0.0 | -5.53 | 12.59 | 0.68 | 0.24 | — | 7200 | 460 | 20 | 0 | 0 | 0 | 3660 | logfile |
✔ | 7JSH | 22454 | 2024-01-18 | 2020-08-14 | 4.4 | 7.07 | — | 17.0 | 0.001 | 0.20 | 0.0 | 0.02 | 8.81 | 0.00 | 2.581 | 0.00 | 0.00 | 13.1 | 83.7 | 3.2 | -3.27 | 0.49 | 0.25 | — | 5.3 | 0.005 | 1.30 | 0.0 | 0.05 | 13.69 | 0.01 | 1.942 | 27.17 | 0.00 | 31.8 | 67.9 | 0.3 | -5.48 | 6.11 | 0.73 | 0.61 | — | 7916 | 1904 | 8 | 15 | 0 | 0 | 0 | logfile |
✔ | 3JAC | 6343 | 2024-01-20 | 2015-06-05 | 4.8 | 6.42 | — | 9.4 | 0.007 | 1.81 | 3.0 | 0.07 | 10.64 | 0.03 | 1.020 | 57.64 | 4.17 | 5.0 | 90.3 | 4.8 | 1.36 | 0.42 | 0.40 | — | 9.1 | 0.012 | 1.69 | 0.0 | 0.07 | 13.57 | 0.01 | 1.926 | 81.43 | 0.00 | 28.0 | 70.8 | 1.2 | -5.43 | 3.68 | 0.54 | 0.60 | — | 15741 | 1716 | 3 | 0 | 1038 | 0 | 0 | logfile |
✔ | 6SHS | 10204 | 2024-01-18 | 2019-08-08 | 4.4 | 4.36 | — | 4.3 | 0.009 | 1.02 | 0.0 | 0.06 | 12.04 | 0.00 | 2.341 | 25.68 | 0.00 | 21.1 | 78.9 | 0.0 | -5.87 | 0.69 | 0.62 | — | 4.3 | 0.003 | 0.64 | 0.0 | 0.05 | 12.91 | 0.00 | 2.147 | 6.28 | 0.00 | 16.0 | 84.0 | 0.0 | -5.40 | 1.12 | 0.72 | 0.70 | — | 7068 | 480 | 12 | 0 | 0 | 0 | 3408 | logfile |
✔ | 7BX7 | 30235 | 2024-01-17 | 2020-04-17 | 2.8 | 2.94 | — | 2.9 | 0.009 | 0.84 | 0.0 | 0.04 | 12.96 | 0.00 | 2.228 | 15.34 | 0.00 | 9.3 | 90.7 | 0.0 | -5.83 | 0.40 | 0.79 | 6.36 | 2.9 | 0.002 | 0.50 | 0.0 | 0.04 | 13.82 | 0.00 | 2.184 | 8.97 | 1.15 | 7.0 | 93.0 | 0.0 | -5.39 | 0.52 | 0.40 | 0.77 | 5.28 | 1896 | 270 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YR6 | 34047 | 2024-01-17 | 2022-08-09 | 4.8 | 5.13 | 4.65 | 4.7 | 0.004 | 0.88 | 0.0 | 0.05 | 25.60 | 0.00 | 2.291 | 7.11 | 3.30 | 15.1 | 84.9 | 0.0 | -5.39 | 0.81 | 0.74 | — | 4.7 | 0.007 | 0.94 | 0.0 | 0.05 | 26.19 | 0.01 | 2.024 | 54.69 | 0.00 | 30.2 | 69.8 | 0.0 | -5.37 | 0.82 | 0.83 | 0.81 | — | 4248 | 220 | 5 | 118 | 0 | 0 | 0 | logfile |
✔ | 7YPG | 33999 | 2024-01-17 | 2022-08-03 | 2.5 | 2.00 | 2.09 | 3.0 | 0.008 | 0.80 | 0.0 | 0.06 | 14.50 | 0.00 | 2.331 | 9.02 | 0.00 | 12.3 | 87.7 | 0.0 | -5.97 | 0.40 | 0.82 | 3.85 | 3.0 | 0.005 | 0.70 | 0.0 | 0.05 | 17.65 | 0.00 | 2.269 | 12.89 | 5.77 | 11.4 | 88.6 | 0.0 | -5.32 | 0.53 | 0.40 | 0.82 | 3.21 | 2676 | 354 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YL7 | 33903 | 2024-01-17 | 2022-07-25 | 3.3 | 3.54 | 3.17 | 3.5 | 0.004 | 1.05 | 0.0 | 0.04 | 11.95 | 0.00 | 2.196 | 22.56 | 0.00 | 4.9 | 95.1 | 0.0 | -5.16 | 0.45 | 0.78 | 4.82 | 3.4 | 0.008 | 0.82 | 0.0 | 0.05 | 13.81 | 0.00 | 2.123 | 16.24 | 1.85 | 17.2 | 82.8 | 0.0 | -5.31 | 0.77 | 0.45 | 0.79 | 5.20 | 2988 | 402 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U15 | 26278 | 2024-01-17 | 2022-02-19 | 3.0 | 3.14 | — | 3.3 | 0.006 | 1.22 | 0.0 | 0.12 | 17.23 | 0.01 | 1.886 | 12.16 | 3.44 | 3.8 | 96.2 | 0.0 | -6.51 | 0.26 | 0.64 | 1.55 | 3.2 | 0.003 | 0.74 | 0.0 | 0.11 | 16.14 | 0.00 | 1.973 | 12.16 | 5.29 | 18.5 | 81.5 | 0.0 | -5.30 | 0.93 | 0.27 | 0.70 | 2.79 | 6684 | 405 | 6 | 0 | 12 | 0 | 3255 | logfile |
✔ | 6N3B | 9350 | 2024-01-17 | 2018-11-14 | 3.8 | 3.75 | — | 4.0 | 0.010 | 1.21 | 0.0 | 0.05 | 11.40 | 0.01 | 2.253 | 20.70 | 0.00 | 13.7 | 86.3 | 0.0 | -5.17 | 0.41 | 0.71 | 2.90 | 4.0 | 0.004 | 0.83 | 0.0 | 0.04 | 16.26 | 0.01 | 2.119 | 23.52 | 1.51 | 13.7 | 86.3 | 0.0 | -5.25 | 1.33 | 0.42 | 0.70 | 1.30 | 2735 | 385 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 5o3L | 3741 | 2024-01-19 | 2017-05-24 | 3.4 | 3.71 | 3.34 | 3.7 | 0.012 | 1.03 | 0.0 | 0.06 | 8.97 | 0.01 | 2.111 | 9.60 | 0.00 | 22.4 | 77.6 | 0.0 | -6.67 | 0.60 | 0.69 | 2.44 | 3.6 | 0.004 | 0.77 | 0.0 | 0.05 | 15.11 | 0.01 | 1.955 | 17.34 | 4.53 | 13.4 | 86.6 | 0.0 | -5.22 | 2.67 | 0.57 | 0.74 | 2.51 | 11360 | 730 | 10 | 0 | 0 | 0 | 5790 | logfile |
✔ | 6iC3 | 4452 | 2024-01-17 | 2018-12-02 | 3.3 | 4.00 | — | 3.9 | 0.010 | 1.26 | 0.0 | 0.06 | 16.17 | 0.01 | 2.277 | 9.22 | 1.39 | 16.9 | 83.1 | 0.0 | -5.61 | 0.76 | 0.80 | 1.39 | 3.9 | 0.005 | 0.90 | 0.0 | 0.04 | 17.37 | 0.01 | 2.197 | 21.26 | 3.30 | 16.3 | 83.7 | 0.0 | -5.21 | 1.22 | 0.72 | 0.77 | 0.37 | 5472 | 728 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N3A | 9349 | 2024-01-17 | 2018-11-14 | 3.3 | 3.44 | — | 3.6 | 0.008 | 1.14 | 0.0 | 0.05 | 14.53 | 0.01 | 2.469 | 17.25 | 0.00 | 8.9 | 91.1 | 0.0 | -5.23 | 0.49 | 0.76 | 3.75 | 3.6 | 0.006 | 0.91 | 0.0 | 0.04 | 19.17 | 0.00 | 2.197 | 15.44 | 3.64 | 10.9 | 89.1 | 0.0 | -5.19 | 1.64 | 0.52 | 0.80 | 3.03 | 4310 | 600 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N37 | 9339 | 2024-01-17 | 2018-11-14 | 3.8 | 3.51 | — | 4.2 | 0.009 | 1.42 | 0.0 | 0.06 | 16.98 | 0.01 | 2.399 | 13.15 | 0.00 | 14.7 | 85.3 | 0.0 | -5.92 | 0.51 | 0.77 | 3.18 | 3.6 | 0.004 | 0.75 | 0.0 | 0.04 | 18.81 | 0.00 | 2.238 | 21.91 | 7.60 | 12.6 | 87.4 | 0.0 | -5.15 | 0.87 | 0.52 | 0.78 | 2.12 | 2580 | 360 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q65 | 13852 | 2024-01-17 | 2021-11-05 | 3.32 | 2.96 | 3.26 | 3.3 | 0.016 | 1.56 | 0.0 | 0.10 | 10.10 | 0.01 | 2.159 | 3.45 | 8.33 | 10.5 | 89.5 | 0.0 | -5.74 | 0.64 | 0.85 | 4.16 | 3.3 | 0.005 | 0.68 | 0.0 | 0.03 | 13.83 | 0.00 | 2.082 | 12.37 | 10.76 | 9.1 | 90.9 | 0.0 | -5.14 | 0.65 | 0.57 | 0.84 | 4.36 | 6204 | 880 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oSM | 20186 | 2024-01-17 | 2019-05-01 | 3.4 | 3.31 | — | 3.4 | 0.012 | 1.45 | 0.0 | 0.09 | 14.06 | 0.00 | 2.183 | 28.91 | 14.88 | 34.5 | 65.5 | 0.0 | -5.34 | 0.46 | 0.74 | 2.68 | 3.4 | 0.007 | 1.20 | 0.0 | 0.07 | 15.46 | 0.00 | 2.162 | 23.54 | 11.71 | 25.7 | 74.3 | 0.0 | -5.10 | 1.14 | 0.45 | 0.75 | 3.04 | 4100 | 600 | 10 | 0 | 0 | 0 | 0 | logfile |