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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7CKM | 30388 | 2024-01-20 | 2020-07-17 | 3.37 | 3.45 | — | 3.4 | 0.003 | 0.58 | 1.0 | 0.04 | 14.02 | 0.00 | 2.250 | 7.29 | 3.56 | 8.6 | 91.4 | 0.0 | -2.94 | 0.75 | 0.81 | 2.53 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 16.24 | 0.00 | 2.188 | 7.06 | 4.09 | 7.8 | 92.2 | 0.0 | -0.38 | 0.46 | 0.75 | 0.83 | 1.85 | 13114 | 1652 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 8iB2 | 35329 | 2024-01-20 | 2023-02-09 | 3.8 | 3.87 | 3.55 | 3.8 | 0.003 | 0.69 | 0.0 | 0.05 | 13.90 | 0.01 | 2.232 | 3.61 | 0.00 | 2.2 | 97.8 | 0.0 | -0.01 | 0.59 | 0.86 | 1.93 | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 15.03 | 0.00 | 2.159 | 5.23 | 1.34 | 2.6 | 97.4 | 0.0 | 0.97 | 1.40 | 0.64 | 0.89 | 1.69 | 15229 | 1931 | 11 | 0 | 5 | 0 | 0 | logfile |
✔ | 7VBM | 31882 | 2024-01-19 | 2021-08-31 | 3.4 | 2.78 | — | 3.1 | 0.005 | 0.75 | 1.0 | 0.04 | 28.39 | 0.01 | 2.221 | 6.15 | 0.18 | 2.0 | 98.0 | 0.0 | 1.47 | 0.68 | 0.78 | 2.79 | 3.1 | 0.003 | 0.56 | 0.0 | 0.03 | 28.75 | 0.00 | 2.205 | 7.05 | 1.25 | 1.7 | 98.3 | 0.0 | 2.66 | 0.29 | 0.68 | 0.80 | 1.89 | 10475 | 677 | 10 | 252 | 0 | 0 | 0 | logfile |
✔ | 6M1i | 30048 | 2024-01-18 | 2020-02-26 | 3.5 | 3.33 | — | 3.2 | 0.008 | 0.97 | 0.0 | 0.06 | 15.40 | 0.01 | 2.210 | 8.41 | 0.32 | 7.1 | 92.9 | 0.0 | -4.80 | 0.83 | 0.80 | 1.81 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 16.62 | 0.00 | 2.121 | 14.08 | 4.10 | 6.4 | 93.6 | 0.0 | -1.19 | 1.30 | 0.82 | 0.80 | 1.23 | 8916 | 1126 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PZC | 20534 | 2024-01-18 | 2019-07-31 | 4.34 | 4.63 | — | 4.4 | 0.008 | 1.12 | 0.0 | 0.06 | 11.22 | 0.01 | 2.137 | 7.52 | 0.42 | 9.7 | 90.3 | 0.0 | -5.15 | 0.60 | 0.54 | — | 4.4 | 0.004 | 0.75 | 0.0 | 0.04 | 11.33 | 0.00 | 2.087 | 13.46 | 0.00 | 6.9 | 93.0 | 0.1 | -0.07 | 1.65 | 0.70 | 0.78 | — | 7456 | 1173 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UWF | 26831 | 2024-01-20 | 2022-05-03 | 2.7 | 2.78 | 2.77 | 2.7 | 0.004 | 0.62 | 0.0 | 0.04 | 12.06 | 0.01 | 2.127 | 6.27 | 0.00 | 3.0 | 97.0 | 0.0 | 1.46 | 0.77 | 0.82 | 2.47 | 2.7 | 0.004 | 0.65 | 0.0 | 0.04 | 15.60 | 0.00 | 2.060 | 7.63 | 2.08 | 3.0 | 97.0 | 0.0 | 1.77 | 0.37 | 0.78 | 0.85 | 2.66 | 13174 | 1760 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N8N | 24238 | 2024-01-19 | 2021-06-15 | 3.89 | 5.26 | — | 4.4 | 0.006 | 0.85 | 0.0 | 0.04 | 27.93 | 0.01 | 2.035 | 27.61 | 0.00 | 9.6 | 90.4 | 0.0 | -1.71 | 0.87 | 0.78 | -0.56 | 4.4 | 0.004 | 0.75 | 0.0 | 0.04 | 28.76 | 0.01 | 2.141 | 21.14 | 2.63 | 6.8 | 92.9 | 0.3 | -0.72 | 1.28 | 0.87 | 0.80 | -0.05 | 11121 | 798 | 6 | 250 | 0 | 0 | 0 | logfile |
✔ | 7XJH | 33227 | 2024-01-18 | 2022-04-18 | 3.3 | 2.96 | 3.18 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 14.02 | 0.00 | 2.218 | 7.28 | 0.00 | 3.1 | 96.9 | 0.0 | 0.45 | 0.60 | 0.78 | 2.05 | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 15.49 | 0.00 | 2.109 | 7.54 | 2.21 | 2.9 | 97.1 | 0.0 | 0.85 | 0.37 | 0.63 | 0.81 | 2.20 | 7832 | 1027 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6VAB | 21135 | 2024-01-17 | 2019-12-17 | 4.9 | 6.51 | — | 6.8 | 0.005 | 0.91 | 0.0 | 0.06 | 8.70 | 0.01 | 2.264 | 14.98 | 0.00 | 6.8 | 93.2 | 0.0 | -3.84 | 0.71 | 0.69 | — | 6.6 | 0.004 | 0.69 | 0.0 | 0.04 | 4.96 | 0.00 | 2.132 | 7.42 | 0.00 | 8.6 | 91.4 | 0.0 | -0.31 | 2.71 | 0.73 | 0.69 | — | 4642 | 938 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HJ2 | 33481 | 2024-01-18 | 2022-11-22 | 3.8 | 3.53 | 3.77 | 3.5 | 0.007 | 1.20 | 0.0 | 0.07 | 13.41 | 0.01 | 2.242 | 5.80 | 0.00 | 4.9 | 95.1 | 0.0 | -2.19 | 0.59 | 0.75 | 1.57 | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 16.01 | 0.00 | 2.204 | 12.03 | 5.36 | 3.7 | 96.3 | 0.0 | 0.71 | 0.49 | 0.58 | 0.74 | 1.17 | 7467 | 1027 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LN5 | 0924 | 2024-01-18 | 2019-12-28 | 2.8 | 2.93 | 2.78 | 2.9 | 0.005 | 0.63 | 0.0 | 0.04 | 12.83 | 0.00 | 2.027 | 5.32 | 0.12 | 2.0 | 98.0 | 0.0 | -4.16 | 0.68 | 0.83 | 3.56 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 16.16 | 0.00 | 2.156 | 6.34 | 1.74 | 2.0 | 98.0 | 0.0 | 0.67 | 1.32 | 0.68 | 0.85 | 2.98 | 7840 | 1011 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7BZ2 | 30249 | 2024-01-18 | 2020-04-26 | 3.82 | 3.99 | — | 3.9 | 0.004 | 0.68 | 0.0 | 0.05 | 15.12 | 0.00 | 2.101 | 12.35 | 0.00 | 10.2 | 89.8 | 0.0 | -6.04 | 0.73 | 0.79 | 2.10 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 16.82 | 0.00 | 2.115 | 9.71 | 2.86 | 5.6 | 94.4 | 0.0 | -2.65 | 1.57 | 0.72 | 0.78 | 1.17 | 7393 | 978 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7KJY | 22902 | 2024-01-19 | 2020-10-26 | 3.2 | 3.84 | — | 3.6 | 0.007 | 0.71 | 0.0 | 0.05 | 15.50 | 0.00 | 2.169 | 14.16 | 4.48 | 7.0 | 93.0 | 0.0 | -3.91 | 0.84 | 0.85 | 2.16 | 3.6 | 0.004 | 0.55 | 0.0 | 0.04 | 15.70 | 0.00 | 2.049 | 12.76 | 3.17 | 3.6 | 96.4 | 0.0 | -0.75 | 2.13 | 0.84 | 0.85 | 2.63 | 10508 | 1388 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 8HiX | 33480 | 2024-01-18 | 2022-11-22 | 3.12 | 2.87 | 3.08 | 3.0 | 0.006 | 0.94 | 0.0 | 0.06 | 15.23 | 0.01 | 2.178 | 6.64 | 0.00 | 4.1 | 95.9 | 0.0 | -1.52 | 0.55 | 0.70 | 2.46 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 16.95 | 0.00 | 2.131 | 10.97 | 2.32 | 3.4 | 96.6 | 0.0 | 0.78 | 0.39 | 0.54 | 0.72 | 1.87 | 8274 | 1043 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XYE | 10649 | 2024-01-18 | 2020-01-30 | 4.3 | 4.37 | 4.28 | 4.3 | 0.010 | 1.29 | 0.0 | 0.09 | 10.03 | 0.01 | 2.315 | 11.42 | 0.00 | 4.7 | 95.3 | 0.0 | -3.09 | 0.71 | 0.69 | — | 4.3 | 0.003 | 0.73 | 0.0 | 0.05 | 12.31 | 0.00 | 2.162 | 14.44 | 0.00 | 8.1 | 91.9 | 0.0 | -1.22 | 2.24 | 0.72 | 0.70 | — | 9834 | 1293 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RNX | 24582 | 2024-01-17 | 2021-07-30 | 3.42 | 3.46 | — | 3.4 | 0.013 | 1.07 | 0.0 | 0.06 | 14.18 | 0.01 | 2.266 | 4.77 | 0.44 | 5.2 | 94.8 | 0.0 | -4.11 | 0.69 | 0.84 | 1.92 | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 15.33 | 0.00 | 2.224 | 9.04 | 3.24 | 3.3 | 96.7 | 0.0 | 1.31 | 0.37 | 0.68 | 0.85 | 2.08 | 6758 | 900 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KLE | 0709 | 2024-01-19 | 2019-07-30 | 4.5 | 4.63 | — | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 14.05 | 0.00 | 2.199 | 13.77 | 0.07 | 7.6 | 92.4 | 0.0 | -0.87 | 0.83 | 0.76 | — | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 14.18 | 0.00 | 2.140 | 14.32 | 0.00 | 7.9 | 92.1 | 0.0 | -0.59 | 0.49 | 0.83 | 0.78 | — | 12769 | 1592 | 3 | 7 | 2 | 0 | 0 | logfile |
✔ | 6XoW | 22282 | 2024-01-18 | 2020-07-07 | 4.6 | 8.17 | 4.40 | 7.0 | 0.006 | 1.00 | 0.0 | 0.05 | 13.39 | 0.01 | 1.991 | 24.14 | 0.23 | 4.2 | 95.8 | 0.0 | -0.98 | 0.87 | 0.72 | — | 6.9 | 0.004 | 0.76 | 0.0 | 0.04 | 13.49 | 0.01 | 2.102 | 27.34 | 0.23 | 4.6 | 95.4 | 0.0 | 0.07 | 1.90 | 0.92 | 0.82 | — | 7711 | 966 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WCB | 21605 | 2024-01-19 | 2020-03-30 | 3.17 | 3.17 | — | 3.2 | 0.005 | 0.41 | 0.0 | 0.03 | 13.87 | 0.00 | 2.128 | 2.50 | 1.29 | 0.8 | 99.2 | 0.0 | 0.58 | 0.55 | 0.77 | 2.89 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 15.28 | 0.00 | 2.046 | 4.14 | 1.13 | 1.5 | 98.5 | 0.0 | 3.12 | 1.27 | 0.54 | 0.80 | 2.40 | 11647 | 734 | 6 | 0 | 7 | 40 | 5904 | logfile |
✔ | 7BG4 | 12170 | 2024-01-18 | 2021-01-05 | 4.2 | 5.01 | — | 4.6 | 0.009 | 1.22 | 0.0 | 0.05 | 15.11 | 0.01 | 1.937 | 16.53 | 0.21 | 9.4 | 90.6 | 0.0 | -2.15 | 0.72 | 0.76 | — | 4.6 | 0.004 | 0.79 | 0.0 | 0.04 | 14.44 | 0.00 | 1.886 | 18.08 | 0.00 | 9.9 | 90.1 | 0.0 | -0.66 | 1.36 | 0.69 | 0.80 | — | 8927 | 1141 | 4 | 0 | 6 | 0 | 0 | logfile |