The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8HC7 | 34654 | 2024-01-18 | 2022-11-01 | 4.54 | 4.75 | 4.46 | 4.5 | 0.003 | 0.61 | 0.0 | 0.04 | 13.29 | 0.00 | 2.255 | 5.72 | 0.00 | 4.7 | 95.3 | 0.0 | -1.52 | 0.77 | 0.68 | — | 4.5 | 0.003 | 0.60 | 0.0 | 0.04 | 13.10 | 0.00 | 2.126 | 14.82 | 0.13 | 7.5 | 92.5 | 0.0 | -1.38 | 1.75 | 0.80 | 0.76 | — | 7373 | 919 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 8DN8 | 27556 | 2024-01-19 | 2022-07-10 | 3.7 | 4.03 | 3.79 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 13.76 | 0.00 | 2.157 | 9.82 | 0.00 | 6.0 | 94.0 | 0.0 | -0.14 | 0.72 | 0.82 | 1.16 | 3.9 | 0.005 | 0.68 | 0.0 | 0.04 | 16.01 | 0.00 | 2.147 | 13.31 | 3.10 | 6.7 | 93.3 | 0.0 | -0.18 | 0.58 | 0.72 | 0.83 | 1.08 | 10638 | 1300 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8DNE | 27564 | 2024-01-19 | 2022-07-11 | 3.5 | 3.77 | 3.53 | 3.8 | 0.004 | 0.65 | 0.0 | 0.04 | 14.83 | 0.00 | 1.785 | 9.38 | 0.00 | 4.9 | 95.1 | 0.0 | -0.37 | 0.71 | 0.78 | 2.45 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 16.54 | 0.00 | 1.923 | 9.38 | 2.41 | 4.1 | 95.9 | 0.0 | -0.20 | 1.22 | 0.69 | 0.77 | 1.46 | 10281 | 1251 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7Q4C | 13801 | 2024-01-18 | 2021-10-30 | 4.08 | 4.49 | 4.12 | 4.4 | 0.007 | 0.92 | 0.0 | 0.05 | 14.85 | 0.01 | 2.077 | 6.86 | 0.00 | 3.3 | 96.7 | 0.0 | -1.44 | 0.71 | 0.75 | — | 4.4 | 0.003 | 0.61 | 0.0 | 0.04 | 14.30 | 0.00 | 2.005 | 8.21 | 0.00 | 2.6 | 97.4 | 0.0 | 1.60 | 0.91 | 0.69 | 0.74 | — | 9503 | 585 | 5 | 0 | 11 | 0 | 4598 | logfile |
✔ | 6E9F | 9014 | 2024-01-18 | 2018-08-01 | 3.3 | 3.57 | 3.33 | 3.5 | 0.011 | 1.13 | 0.0 | 0.07 | 15.53 | 0.01 | 1.872 | 10.69 | 0.00 | 8.1 | 91.9 | 0.0 | -5.59 | 0.66 | 0.81 | 3.51 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 17.93 | 0.00 | 2.019 | 11.89 | 3.74 | 4.6 | 95.4 | 0.0 | -1.09 | 1.14 | 0.67 | 0.84 | 2.42 | 8745 | 864 | 4 | 79 | 1 | 0 | 0 | logfile |
✔ | 7XMR | 33302 | 2024-01-17 | 2022-04-26 | 3.1 | 3.31 | 2.93 | 3.3 | 0.001 | 0.40 | 0.0 | 0.04 | 10.86 | 0.00 | 2.250 | 5.63 | 0.00 | 1.6 | 98.4 | 0.0 | -3.39 | 0.52 | 0.64 | 1.08 | 3.3 | 0.003 | 0.65 | 0.0 | 0.04 | 14.38 | 0.00 | 2.112 | 11.80 | 2.73 | 3.6 | 96.4 | 0.0 | 0.22 | 0.64 | 0.59 | 0.74 | 1.47 | 6611 | 871 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TTH | 26115 | 2024-01-19 | 2022-02-01 | 3.25 | 3.81 | — | 3.7 | 0.004 | 0.70 | 0.0 | 0.05 | 13.05 | 0.00 | 2.232 | 7.80 | 0.00 | 4.5 | 95.5 | 0.0 | -0.01 | 0.55 | 0.71 | 1.99 | 3.7 | 0.003 | 0.86 | 1.0 | 0.05 | 14.23 | 0.00 | 2.097 | 6.20 | 1.75 | 4.7 | 95.3 | 0.0 | 0.59 | 0.51 | 0.65 | 0.79 | 1.71 | 12698 | 1750 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 7XD6 | 33137 | 2024-01-18 | 2022-03-26 | 2.84 | 3.25 | 2.83 | 3.0 | 0.005 | 0.74 | 0.0 | 0.04 | 22.69 | 0.00 | 1.975 | 1.30 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.86 | — | 3.1 | 0.005 | 0.67 | 0.0 | 0.04 | 22.81 | 0.00 | 1.877 | 7.89 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.32 | 0.88 | 0.89 | — | 9843 | 0 | 3 | 459 | 29 | 0 | 0 | logfile |
✔ | 7Eo4 | 31226 | 2024-01-18 | 2021-04-21 | 2.86 | 2.93 | — | 2.9 | 0.019 | 1.00 | 0.0 | 0.17 | 14.18 | 0.01 | 2.220 | 2.30 | 0.00 | 7.2 | 92.8 | 0.0 | -1.38 | 0.60 | 0.71 | 2.26 | 2.9 | 0.003 | 0.67 | 1.0 | 0.04 | 15.72 | 0.01 | 2.195 | 5.62 | 1.99 | 4.1 | 95.9 | 0.0 | -0.31 | 0.33 | 0.60 | 0.75 | 1.62 | 8302 | 1059 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7XD5 | 33136 | 2024-01-18 | 2022-03-26 | 2.84 | 3.32 | 2.81 | 3.1 | 0.003 | 0.58 | 0.0 | 0.03 | 21.94 | 0.00 | 1.864 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.86 | — | 3.1 | 0.004 | 0.57 | 0.0 | 0.03 | 22.05 | 0.00 | 1.955 | 5.42 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.38 | 0.89 | 0.90 | — | 8714 | 0 | 3 | 406 | 30 | 0 | 0 | logfile |
✔ | 7S1Y | 24812 | 2024-01-17 | 2021-09-02 | 3.6 | 3.90 | — | 3.9 | 0.005 | 0.77 | 2.0 | 0.04 | 12.89 | 0.01 | 1.566 | 12.97 | 0.00 | 7.2 | 92.6 | 0.2 | -0.33 | 0.40 | 0.55 | 0.33 | 3.9 | 0.003 | 0.71 | 2.0 | 0.04 | 14.94 | 0.00 | 2.179 | 13.53 | 3.47 | 7.2 | 92.6 | 0.2 | -0.43 | 0.55 | 0.52 | 0.65 | 0.63 | 6580 | 948 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 6VAM | 21143 | 2024-01-20 | 2019-12-17 | 3.63 | 4.11 | — | 4.0 | 0.005 | 0.84 | 0.0 | 0.04 | 14.63 | 0.00 | 2.290 | 9.78 | 0.00 | 7.3 | 92.7 | 0.0 | -1.89 | 0.65 | 0.76 | 2.23 | 4.0 | 0.003 | 0.68 | 0.0 | 0.04 | 16.31 | 0.00 | 2.368 | 6.99 | 0.49 | 5.1 | 94.9 | 0.0 | 2.15 | 0.48 | 0.65 | 0.79 | 2.29 | 13360 | 1712 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UML | 26603 | 2024-01-20 | 2022-04-07 | 3.5 | 3.77 | 3.85 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 15.49 | 0.00 | 2.114 | 7.56 | 0.00 | 2.0 | 97.4 | 0.6 | -2.75 | 0.66 | 0.69 | 2.52 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 17.29 | 0.00 | 2.021 | 9.90 | 2.30 | 10.5 | 89.1 | 0.4 | -1.50 | 0.81 | 0.65 | 0.72 | 2.42 | 13227 | 812 | 7 | 13 | 0 | 0 | 6477 | logfile |
✔ | 7XMT | 33304 | 2024-01-18 | 2022-04-26 | 2.8 | 2.93 | 2.65 | 3.0 | 0.002 | 0.47 | 0.0 | 0.04 | 9.40 | 0.00 | 2.267 | 6.46 | 0.00 | 3.0 | 97.0 | 0.0 | -3.88 | 0.55 | 0.63 | 1.96 | 2.9 | 0.004 | 1.00 | 1.0 | 0.05 | 14.82 | 0.00 | 2.031 | 15.30 | 2.11 | 3.3 | 96.6 | 0.1 | -0.52 | 1.30 | 0.61 | 0.75 | 2.84 | 8137 | 1068 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8CXo | 27062 | 2024-01-17 | 2022-05-22 | 3.7 | 4.10 | 3.65 | 4.1 | 0.003 | 0.58 | 0.0 | 0.04 | 10.10 | 0.00 | 2.329 | 2.39 | 0.00 | 2.7 | 96.9 | 0.4 | 1.90 | 0.60 | 0.77 | 1.79 | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 15.76 | 0.00 | 2.195 | 13.78 | 4.74 | 4.6 | 95.4 | 0.0 | 1.13 | 1.90 | 0.62 | 0.80 | 0.92 | 4392 | 551 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 8DCX | 27330 | 2024-01-18 | 2022-06-17 | 2.8 | 3.32 | 3.33 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 14.71 | 0.00 | 2.195 | 13.47 | 0.00 | 5.4 | 94.6 | 0.1 | -0.04 | 0.48 | 0.60 | 0.77 | 3.4 | 0.006 | 0.98 | 1.0 | 0.04 | 16.74 | 0.00 | 2.200 | 15.24 | 1.58 | 4.6 | 95.3 | 0.1 | 0.37 | 0.42 | 0.45 | 0.60 | 0.62 | 9627 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FY9 | 29561 | 2024-01-19 | 2023-01-25 | 3.1 | 3.32 | 3.15 | 3.3 | 0.003 | 0.52 | 0.0 | 0.04 | 17.51 | 0.00 | 2.209 | 11.22 | 0.00 | 3.1 | 96.9 | 0.0 | 0.86 | 0.70 | 0.77 | 2.18 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 18.89 | 0.00 | 2.218 | 11.45 | 2.51 | 2.9 | 97.1 | 0.0 | 1.22 | 1.17 | 0.69 | 0.78 | 2.21 | 10742 | 1228 | 8 | 56 | 0 | 0 | 0 | logfile |
✔ | 7MQS | 23951 | 2024-01-20 | 2021-05-06 | 4.4 | 4.79 | 4.46 | 4.4 | 0.015 | 1.73 | 7.0 | 0.10 | 15.00 | 0.01 | 2.416 | 3.33 | 0.00 | 9.6 | 89.8 | 0.6 | -3.94 | 0.83 | 0.76 | — | 4.4 | 0.004 | 0.80 | 0.0 | 0.05 | 14.06 | 0.00 | 2.087 | 22.15 | 0.00 | 11.5 | 88.2 | 0.3 | -2.11 | 0.68 | 0.84 | 0.79 | — | 14028 | 1739 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VFX | 31962 | 2024-01-18 | 2021-09-14 | 2.8 | 2.73 | 2.85 | 2.9 | 0.003 | 0.65 | 0.0 | 0.05 | 15.03 | 0.00 | 2.225 | 5.38 | 0.00 | 3.1 | 96.9 | 0.0 | 0.41 | 0.70 | 0.87 | 3.94 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.49 | 0.00 | 2.134 | 5.10 | 1.24 | 2.9 | 97.1 | 0.0 | 1.08 | 1.25 | 0.71 | 0.90 | 3.73 | 9004 | 1139 | 7 | 0 | 4 | 0 | 0 | logfile |
✔ | 8GUD | 34273 | 2024-01-17 | 2022-09-11 | 2.62 | 2.98 | 2.83 | 3.1 | 0.008 | 0.79 | 0.0 | 0.05 | 14.85 | 0.01 | 2.116 | 20.31 | 0.00 | 6.0 | 94.0 | 0.0 | -2.12 | 0.52 | 0.56 | 1.45 | 3.1 | 0.005 | 0.75 | 0.0 | 0.05 | 17.31 | 0.00 | 2.114 | 20.39 | 3.43 | 7.5 | 92.5 | 0.0 | -1.77 | 0.35 | 0.49 | 0.57 | 1.52 | 6814 | 835 | 1 | 0 | 1 | 0 | 0 | logfile |