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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7CH6 | 30369 | 2024-01-18 | 2020-07-05 | 3.4 | 3.53 | — | 3.5 | 0.008 | 0.82 | 0.0 | 0.13 | 16.46 | 0.01 | 2.077 | 17.44 | 12.88 | 9.6 | 90.4 | 0.0 | -4.53 | 0.71 | 0.84 | 2.62 | 3.5 | 0.004 | 0.72 | 0.0 | 0.04 | 16.38 | 0.01 | 2.151 | 15.48 | 5.84 | 5.3 | 94.7 | 0.0 | -1.62 | 1.24 | 0.70 | 0.84 | 1.95 | 9260 | 1214 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 6W8o | 21576 | 2024-01-17 | 2020-03-20 | 3.4 | 4.30 | — | 4.1 | 0.029 | 1.20 | 3.0 | 0.05 | 17.62 | 0.01 | 1.161 | 20.04 | 11.79 | 6.7 | 93.3 | 0.0 | -3.22 | 0.57 | 0.81 | 1.49 | 4.1 | 0.004 | 0.91 | 0.0 | 0.05 | 17.72 | 0.00 | 2.182 | 15.56 | 8.06 | 5.8 | 94.2 | 0.0 | 0.34 | 1.14 | 0.55 | 0.79 | 1.61 | 6332 | 832 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZG | 24759 | 2024-01-20 | 2021-08-27 | 4.1 | 3.50 | — | 3.7 | 0.007 | 1.17 | 0.0 | 0.06 | 12.78 | 0.01 | 2.077 | 19.55 | 0.18 | 6.1 | 93.9 | 0.0 | -3.80 | 0.62 | 0.67 | — | 3.4 | 0.004 | 0.79 | 0.0 | 0.05 | 14.06 | 0.00 | 2.130 | 13.67 | 0.00 | 6.7 | 93.3 | 0.0 | -0.94 | 1.28 | 0.63 | 0.70 | — | 15385 | 1888 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZi | 24761 | 2024-01-20 | 2021-08-27 | 3.0 | 3.17 | — | 3.2 | 0.006 | 0.97 | 1.0 | 0.06 | 12.55 | 0.01 | 2.203 | 10.47 | 0.47 | 1.7 | 98.3 | 0.0 | -4.04 | 0.67 | 0.79 | 2.92 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 17.06 | 0.00 | 2.212 | 6.57 | 2.33 | 3.3 | 96.7 | 0.0 | 0.36 | 1.66 | 0.69 | 0.84 | 2.65 | 15736 | 1921 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XLD | 22240 | 2024-01-19 | 2020-06-28 | 3.66 | 3.78 | — | 3.7 | 0.003 | 0.51 | 0.0 | 0.04 | 10.19 | 0.00 | 2.061 | 5.73 | 0.58 | 1.5 | 98.5 | 0.0 | -3.76 | 0.77 | 0.75 | 1.85 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 14.83 | 0.00 | 1.890 | 11.95 | 1.74 | 3.5 | 96.5 | 0.0 | -0.31 | 1.42 | 0.80 | 0.81 | 2.50 | 10992 | 1349 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7XK8 | 33247 | 2024-01-17 | 2022-04-19 | 3.3 | 3.49 | 3.12 | 3.4 | 0.011 | 0.48 | 0.0 | 0.04 | 11.62 | 0.00 | 2.248 | 7.78 | 0.00 | 3.1 | 96.9 | 0.0 | -1.25 | 0.55 | 0.65 | 0.38 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 14.98 | 0.00 | 2.092 | 13.42 | 4.93 | 4.2 | 95.8 | 0.0 | 0.30 | 0.66 | 0.58 | 0.72 | 0.70 | 6796 | 923 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7DoK | 30795 | 2024-01-19 | 2020-12-14 | 2.73 | 2.84 | — | 2.9 | 0.009 | 1.01 | 0.0 | 0.07 | 14.39 | 0.01 | 1.695 | 5.72 | 0.60 | 2.4 | 97.6 | 0.0 | -2.40 | 0.71 | 0.85 | 3.23 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 15.85 | 0.00 | 2.054 | 6.83 | 2.14 | 1.5 | 98.5 | 0.0 | 0.39 | 0.44 | 0.70 | 0.86 | 3.06 | 11534 | 1323 | 8 | 44 | 9 | 2 | 0 | logfile |
✔ | 6CJQ | 7482 | 2024-01-19 | 2018-02-26 | 3.42 | 3.51 | — | 3.5 | 0.009 | 1.36 | 0.0 | 0.06 | 12.07 | 0.01 | 2.306 | 5.41 | 0.60 | 7.0 | 93.0 | 0.0 | -3.36 | 0.70 | 0.84 | 2.91 | 3.5 | 0.003 | 0.68 | 0.0 | 0.04 | 14.38 | 0.00 | 2.175 | 8.99 | 2.83 | 4.4 | 95.6 | 0.0 | 0.90 | 0.73 | 0.72 | 0.86 | 1.90 | 12768 | 1568 | 8 | 0 | 24 | 0 | 0 | logfile |
✔ | 7oo0 | 13003 | 2024-01-20 | 2021-05-26 | 3.1 | 3.05 | 2.96 | 3.1 | 0.009 | 0.86 | 0.0 | 0.05 | 28.47 | 0.00 | 2.131 | 7.27 | 0.00 | 3.1 | 96.9 | 0.0 | -1.80 | 0.61 | 0.78 | 2.85 | 3.1 | 0.003 | 0.57 | 0.0 | 0.04 | 13.60 | 0.00 | 2.216 | 5.65 | 0.94 | 1.4 | 98.6 | 0.0 | 1.68 | 1.56 | 0.61 | 0.79 | 2.23 | 16016 | 1834 | 14 | 0 | 56 | 0 | 0 | logfile |
✔ | 7WX3 | 32875 | 2024-01-18 | 2022-02-14 | 3.1 | 3.61 | 3.03 | 3.5 | 0.011 | 0.91 | 0.0 | 0.05 | 16.74 | 0.00 | 2.150 | 6.65 | 3.70 | 4.6 | 95.4 | 0.0 | -3.51 | 0.57 | 0.78 | 1.78 | 3.5 | 0.004 | 0.63 | 0.0 | 0.04 | 16.67 | 0.00 | 2.073 | 6.29 | 2.18 | 2.3 | 97.7 | 0.0 | -0.48 | 1.55 | 0.56 | 0.78 | 1.18 | 8472 | 1086 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 8B8J | 15914 | 2024-01-19 | 2022-10-04 | 2.96 | 3.60 | 2.92 | 3.4 | 0.003 | 0.46 | 0.0 | 0.04 | 9.83 | 0.00 | 2.211 | 6.94 | 1.25 | 2.4 | 97.6 | 0.0 | 2.21 | 0.60 | 0.76 | 1.84 | 3.4 | 0.005 | 0.67 | 0.0 | 0.04 | 13.33 | 0.00 | 2.167 | 10.20 | 2.12 | 2.7 | 97.3 | 0.0 | 1.69 | 1.46 | 0.63 | 0.80 | 2.08 | 11686 | 1418 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 8JV8 | 36671 | 2024-01-18 | 2023-06-27 | 3.34 | 4.07 | 3.31 | 3.8 | 0.015 | 1.47 | 0.0 | 0.06 | 17.53 | 0.01 | 1.988 | 14.93 | 3.55 | 6.5 | 93.4 | 0.1 | -1.23 | 0.72 | 0.76 | 2.32 | 3.9 | 0.002 | 0.68 | 0.0 | 0.04 | 17.14 | 0.00 | 2.168 | 8.31 | 4.32 | 5.2 | 94.8 | 0.0 | -0.28 | 0.96 | 0.73 | 0.77 | 2.48 | 7245 | 960 | 9 | 0 | 9 | 3 | 0 | logfile |
✔ | 6oUA | 20200 | 2024-01-17 | 2019-05-04 | 4.18 | 4.32 | — | 4.3 | 0.008 | 1.37 | 1.0 | 0.07 | 13.97 | 0.01 | 2.294 | 7.03 | 2.35 | 17.4 | 82.3 | 0.3 | -5.89 | 0.72 | 0.79 | — | 4.3 | 0.003 | 0.84 | 0.0 | 0.05 | 14.33 | 0.00 | 2.171 | 10.55 | 0.00 | 12.5 | 87.5 | 0.0 | -1.88 | 1.15 | 0.71 | 0.76 | — | 5208 | 637 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HND | 34911 | 2024-01-17 | 2022-12-07 | 3.19 | 3.62 | 3.32 | 3.6 | 0.008 | 1.22 | 4.0 | 0.07 | 14.37 | 0.02 | 2.231 | 14.77 | 0.65 | 4.5 | 95.5 | 0.0 | -2.74 | 0.50 | 0.73 | 2.07 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 15.04 | 0.00 | 2.199 | 7.79 | 2.37 | 3.4 | 96.6 | 0.0 | 1.23 | 2.13 | 0.43 | 0.68 | 1.97 | 4370 | 560 | 3 | 0 | 4 | 0 | 0 | logfile |
✔ | 7F1R | 31423 | 2024-01-18 | 2021-06-09 | 3.0 | 3.21 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 11.21 | 0.00 | 2.224 | 8.07 | 0.46 | 1.5 | 98.5 | 0.0 | -2.21 | 0.59 | 0.70 | 1.80 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 15.10 | 0.00 | 2.161 | 13.12 | 2.91 | 3.6 | 96.4 | 0.0 | 0.55 | 1.24 | 0.63 | 0.80 | 2.47 | 6621 | 894 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K18 | 22621 | 2024-01-18 | 2020-09-07 | 3.3 | 3.43 | — | 3.4 | 0.006 | 1.09 | 1.0 | 0.05 | 20.82 | 0.01 | 1.936 | 21.56 | 3.41 | 7.9 | 91.8 | 0.3 | -3.42 | 0.53 | 0.72 | 1.76 | 3.4 | 0.003 | 0.70 | 0.0 | 0.04 | 18.26 | 0.00 | 2.095 | 13.47 | 4.92 | 6.2 | 93.7 | 0.1 | -0.06 | 0.66 | 0.52 | 0.75 | 1.51 | 9749 | 1195 | 6 | 0 | 19 | 0 | 0 | logfile |
✔ | 6Li3 | 0902 | 2024-01-18 | 2019-12-10 | 3.32 | 3.48 | — | 3.8 | 0.002 | 0.56 | 0.0 | 0.04 | 13.86 | 0.00 | 2.124 | 7.66 | 0.00 | 2.4 | 97.6 | 0.0 | -2.69 | 0.55 | 0.68 | 0.78 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 16.90 | 0.00 | 2.146 | 9.11 | 4.52 | 4.1 | 95.9 | 0.0 | -0.05 | 1.34 | 0.59 | 0.77 | 1.73 | 8289 | 1045 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DFH | 30664 | 2024-01-19 | 2020-11-08 | 2.97 | 3.14 | — | 3.1 | 0.008 | 0.93 | 0.0 | 0.06 | 14.92 | 0.01 | 2.159 | 5.69 | 0.09 | 3.4 | 96.6 | 0.0 | -3.16 | 0.70 | 0.82 | 2.92 | 3.1 | 0.003 | 0.57 | 0.0 | 0.04 | 16.59 | 0.00 | 2.102 | 8.19 | 1.52 | 2.5 | 97.5 | 0.0 | -0.04 | 1.17 | 0.72 | 0.85 | 2.53 | 9980 | 1191 | 9 | 20 | 8 | 2 | 0 | logfile |
✔ | 7WLL | 32587 | 2024-01-18 | 2022-01-13 | 3.6 | 3.89 | — | 3.8 | 0.012 | 1.19 | 2.0 | 0.08 | 16.94 | 0.00 | 2.026 | 13.97 | 0.50 | 7.3 | 92.6 | 0.1 | -0.42 | 0.60 | 0.81 | 1.99 | 3.8 | 0.004 | 0.85 | 0.0 | 0.06 | 16.93 | 0.00 | 2.181 | 12.63 | 1.49 | 6.5 | 93.5 | 0.0 | 0.84 | 1.17 | 0.59 | 0.81 | 1.52 | 9540 | 1135 | 1 | 0 | 21 | 0 | 0 | logfile |
✔ | 6NUR | 0520 | 2024-01-18 | 2019-02-01 | 3.1 | 3.25 | 3.17 | 3.3 | 0.016 | 1.55 | 0.0 | 0.09 | 10.59 | 0.01 | 2.270 | 2.28 | 0.52 | 1.4 | 98.6 | 0.0 | -0.12 | 0.64 | 0.81 | 4.19 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 14.51 | 0.00 | 2.207 | 7.24 | 2.30 | 2.1 | 97.9 | 0.0 | 0.54 | 0.72 | 0.58 | 0.82 | 3.14 | 8647 | 1087 | 5 | 0 | 2 | 0 | 0 | logfile |