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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8FEJ | 29029 | 2024-01-19 | 2022-12-06 | 4.64 | 5.33 | 4.68 | 4.6 | 0.001 | 0.37 | 0.0 | 0.04 | 13.97 | 0.00 | 2.253 | 6.27 | 4.30 | 2.9 | 96.9 | 0.2 | 0.48 | 0.88 | 0.69 | — | 4.6 | 0.002 | 0.54 | 0.0 | 0.04 | 12.30 | 0.00 | 2.260 | 9.45 | 0.00 | 5.5 | 94.3 | 0.2 | -0.55 | 1.30 | 0.91 | 0.74 | — | 10464 | 1368 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FEL | 29032 | 2024-01-18 | 2022-12-06 | 4.64 | 5.02 | 4.40 | 4.5 | 0.001 | 0.35 | 0.0 | 0.04 | 14.88 | 0.00 | 2.191 | 6.97 | 1.98 | 3.8 | 96.2 | 0.0 | -0.24 | 0.70 | 0.37 | — | 4.2 | 0.002 | 0.54 | 0.0 | 0.04 | 13.03 | 0.00 | 2.273 | 10.05 | 0.00 | 4.6 | 95.4 | 0.0 | -0.37 | 1.69 | 0.73 | 0.44 | — | 9201 | 1191 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KRD | 0756 | 2024-01-18 | 2019-08-21 | 4.38 | 4.25 | — | 4.4 | 0.001 | 0.39 | 0.0 | 0.04 | 7.15 | 0.00 | 2.226 | 5.80 | 0.00 | 4.5 | 95.5 | 0.1 | -3.58 | 0.57 | 0.52 | — | 4.3 | 0.003 | 0.69 | 0.0 | 0.04 | 12.10 | 0.00 | 2.093 | 12.74 | 0.00 | 3.6 | 96.4 | 0.1 | -0.22 | 1.82 | 0.64 | 0.64 | — | 61005 | 8006 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KRE | 0757 | 2024-01-18 | 2019-08-21 | 4.45 | 4.34 | — | 4.4 | 0.001 | 0.39 | 0.0 | 0.04 | 7.11 | 0.00 | 2.244 | 6.04 | 0.03 | 4.1 | 95.8 | 0.1 | -3.50 | 0.61 | 0.56 | — | 4.4 | 0.003 | 0.72 | 0.0 | 0.04 | 12.13 | 0.00 | 2.074 | 15.64 | 0.02 | 4.4 | 95.5 | 0.1 | -0.24 | 1.84 | 0.68 | 0.66 | — | 60321 | 7922 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KS8 | 0760 | 2024-01-19 | 2019-08-23 | 4.69 | 4.76 | — | 4.6 | 0.001 | 0.39 | 0.0 | 0.04 | 7.12 | 0.00 | 2.228 | 5.86 | 0.01 | 4.4 | 95.5 | 0.0 | -3.61 | 0.77 | 0.67 | — | 4.6 | 0.003 | 0.69 | 0.0 | 0.04 | 11.58 | 0.00 | 2.091 | 17.25 | 0.01 | 3.7 | 96.3 | 0.0 | -0.05 | 1.87 | 0.81 | 0.72 | — | 61943 | 8120 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KS7 | 0759 | 2024-01-19 | 2019-08-23 | 4.62 | 4.57 | — | 4.5 | 0.001 | 0.39 | 0.0 | 0.04 | 7.11 | 0.00 | 2.241 | 5.72 | 0.00 | 4.3 | 95.7 | 0.0 | -3.50 | 0.70 | 0.62 | — | 4.5 | 0.003 | 0.73 | 0.0 | 0.04 | 12.16 | 0.00 | 2.062 | 17.17 | 0.03 | 4.1 | 95.8 | 0.1 | -0.34 | 1.89 | 0.75 | 0.69 | — | 62022 | 8131 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FiJ | 31599 | 2024-01-17 | 2021-07-31 | 3.8 | 2.32 | — | 1.8 | 0.001 | 0.41 | 0.0 | 0.04 | 8.02 | 0.00 | 2.344 | 3.95 | 0.00 | 4.1 | 95.9 | 0.0 | 1.10 | 0.58 | 0.50 | 3.05 | 1.3 | 0.006 | 0.86 | 0.0 | 0.05 | 12.15 | 0.00 | 2.164 | 13.33 | 11.25 | 16.5 | 83.5 | 0.0 | -1.70 | 0.74 | 0.62 | 0.56 | 2.72 | 3061 | 561 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XSK | 33425 | 2024-01-19 | 2022-05-14 | 3.53 | 4.49 | 3.42 | 3.4 | 0.001 | 0.44 | 0.0 | 0.02 | 23.47 | 0.00 | 1.970 | 6.98 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.76 | — | 3.4 | 0.007 | 0.70 | 0.0 | 0.04 | 24.80 | 0.01 | 1.762 | 32.64 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.16 | 0.91 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 6NEQ | 9358 | 2024-01-19 | 2018-12-18 | 3.32 | 3.85 | — | 3.5 | 0.001 | 0.37 | 0.0 | 0.03 | 16.68 | 0.00 | 1.949 | 3.29 | 0.35 | 10.3 | 88.1 | 1.6 | -2.42 | 0.69 | 0.51 | 0.07 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 19.20 | 0.00 | 2.059 | 13.20 | 1.83 | 5.0 | 94.9 | 0.1 | -0.39 | 2.04 | 0.85 | 0.85 | 1.40 | 65776 | 5509 | 32 | 952 | 147 | 0 | 0 | logfile |
✔ | 7SQV | 25396 | 2024-01-17 | 2021-11-06 | 2.3 | 2.95 | 2.29 | 2.8 | 0.001 | 0.38 | 0.0 | 0.04 | 16.08 | 0.00 | 2.314 | 1.47 | 0.63 | 0.7 | 99.3 | 0.0 | 1.86 | 0.76 | 0.88 | 3.59 | 2.8 | 0.003 | 0.47 | 0.0 | 0.04 | 16.22 | 0.00 | 2.300 | 1.47 | 1.25 | 1.1 | 98.9 | 0.0 | 1.75 | 1.99 | 0.77 | 0.90 | 3.89 | 4471 | 573 | 5 | 0 | 0 | 7 | 0 | logfile |
✔ | 7JSH | 22454 | 2024-01-18 | 2020-08-14 | 4.4 | 7.07 | — | 17.0 | 0.001 | 0.20 | 0.0 | 0.02 | 8.81 | 0.00 | 2.581 | 0.00 | 0.00 | 13.1 | 83.7 | 3.2 | -3.27 | 0.49 | 0.25 | — | 5.3 | 0.005 | 1.30 | 0.0 | 0.05 | 13.69 | 0.01 | 1.942 | 27.17 | 0.00 | 31.8 | 67.9 | 0.3 | -5.48 | 6.11 | 0.73 | 0.61 | — | 7916 | 1904 | 8 | 15 | 0 | 0 | 0 | logfile |
✔ | 7UVT | 26816 | 2024-01-19 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 23.45 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.72 | 0.0 | 0.04 | 24.05 | 0.01 | 1.912 | 21.92 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.48 | 0.77 | 0.77 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 6X33 | 22016 | 2024-01-19 | 2020-05-21 | 4.2 | 4.35 | — | 4.3 | 0.001 | 0.37 | 0.0 | 0.03 | 9.39 | 0.00 | 2.304 | 3.24 | 0.00 | 1.9 | 98.1 | 0.0 | -4.22 | 0.55 | 0.69 | — | 4.3 | 0.002 | 0.61 | 0.0 | 0.04 | 11.64 | 0.00 | 2.094 | 8.35 | 0.08 | 2.9 | 97.1 | 0.0 | 0.38 | 0.62 | 0.58 | 0.72 | — | 112372 | 14796 | 16 | 0 | 1436 | 0 | 0 | logfile |
✔ | 7F1R | 31423 | 2024-01-18 | 2021-06-09 | 3.0 | 3.21 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 11.21 | 0.00 | 2.224 | 8.07 | 0.46 | 1.5 | 98.5 | 0.0 | -2.21 | 0.59 | 0.70 | 1.80 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 15.10 | 0.00 | 2.161 | 13.12 | 2.91 | 3.6 | 96.4 | 0.0 | 0.55 | 1.24 | 0.63 | 0.80 | 2.47 | 6621 | 894 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WVU | 32858 | 2024-01-17 | 2022-02-11 | 3.3 | 3.40 | — | 3.4 | 0.002 | 0.47 | 0.0 | 0.04 | 13.25 | 0.00 | 2.221 | 8.52 | 0.00 | 2.3 | 97.7 | 0.0 | 0.98 | 0.58 | 0.72 | 1.55 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 15.25 | 0.00 | 2.222 | 10.37 | 4.27 | 3.1 | 96.9 | 0.0 | 0.68 | 0.41 | 0.61 | 0.78 | 2.02 | 6862 | 909 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Li3 | 0902 | 2024-01-18 | 2019-12-10 | 3.32 | 3.48 | — | 3.8 | 0.002 | 0.56 | 0.0 | 0.04 | 13.86 | 0.00 | 2.124 | 7.66 | 0.00 | 2.4 | 97.6 | 0.0 | -2.69 | 0.55 | 0.68 | 0.78 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 16.90 | 0.00 | 2.146 | 9.11 | 4.52 | 4.1 | 95.9 | 0.0 | -0.05 | 1.34 | 0.59 | 0.77 | 1.73 | 8289 | 1045 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DPi | 27636 | 2024-01-18 | 2022-07-15 | 3.4 | 2.28 | 3.42 | 2.1 | 0.002 | 0.55 | 0.0 | 0.06 | 10.82 | 0.00 | 2.211 | 4.16 | 0.98 | 1.3 | 98.6 | 0.1 | 1.79 | 0.73 | 0.68 | 1.99 | 2.1 | 0.003 | 0.64 | 0.0 | 0.04 | 14.04 | 0.00 | 2.070 | 7.43 | 2.44 | 3.1 | 96.9 | 0.0 | 0.63 | 0.59 | 0.75 | 0.73 | 2.18 | 8150 | 1093 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WAZ | 32390 | 2024-01-19 | 2021-12-15 | 3.4 | 3.85 | — | 3.4 | 0.002 | 0.59 | 0.0 | 0.04 | 20.81 | 0.00 | 2.160 | 11.49 | 5.53 | 4.0 | 95.8 | 0.2 | 0.74 | 0.67 | 0.58 | 0.88 | 3.4 | 0.004 | 0.72 | 0.0 | 0.04 | 21.84 | 0.00 | 2.115 | 21.87 | 2.04 | 7.3 | 92.6 | 0.1 | -0.18 | 1.70 | 0.70 | 0.63 | 0.72 | 11034 | 952 | 4 | 157 | 0 | 0 | 0 | logfile |
✔ | 6WB1 | 21584 | 2024-01-18 | 2020-03-26 | 4.7 | 4.87 | — | 4.6 | 0.002 | 0.50 | 0.0 | 0.04 | 16.71 | 0.00 | 2.204 | 7.21 | 0.55 | 4.5 | 95.4 | 0.1 | -4.82 | 0.86 | 0.80 | — | 4.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.89 | 0.00 | 2.163 | 9.63 | 0.00 | 3.5 | 96.5 | 0.0 | -0.60 | 0.72 | 0.88 | 0.83 | — | 8235 | 944 | 4 | 75 | 0 | 0 | 0 | logfile |
✔ | 7XMS | 33303 | 2024-01-18 | 2022-04-26 | 2.9 | 3.10 | 2.83 | 3.2 | 0.002 | 0.46 | 0.0 | 0.04 | 10.09 | 0.00 | 2.251 | 6.90 | 0.00 | 2.9 | 97.1 | 0.0 | -4.06 | 0.55 | 0.65 | 1.49 | 3.1 | 0.003 | 0.72 | 0.0 | 0.04 | 15.34 | 0.00 | 2.087 | 13.99 | 2.07 | 4.1 | 95.9 | 0.0 | -0.37 | 0.80 | 0.60 | 0.75 | 2.26 | 8370 | 1113 | 6 | 0 | 0 | 0 | 0 | logfile |