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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7SAM | 24952 | 2024-01-17 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 22.03 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.007 | 0.90 | 0.0 | 0.04 | 27.59 | 0.01 | 1.795 | 82.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.58 | 0.96 | 0.87 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 6UES | 20755 | 2024-01-17 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 25.90 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.89 | 0.0 | 0.04 | 27.41 | 0.01 | 1.783 | 37.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 7XSK | 33425 | 2024-01-19 | 2022-05-14 | 3.53 | 4.49 | 3.42 | 3.4 | 0.001 | 0.44 | 0.0 | 0.02 | 23.47 | 0.00 | 1.970 | 6.98 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.76 | — | 3.4 | 0.007 | 0.70 | 0.0 | 0.04 | 24.80 | 0.01 | 1.762 | 32.64 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.16 | 0.91 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 8SZA | 40905 | 2024-01-17 | 2023-05-29 | 2.75 | 3.32 | 2.81 | 3.4 | 0.003 | 0.65 | 0.0 | 0.03 | 15.14 | 0.00 | 2.185 | 8.19 | 0.98 | 0.3 | 99.7 | 0.0 | 2.12 | 0.50 | 0.78 | 1.28 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 15.63 | 0.00 | 2.277 | 8.69 | 2.16 | 0.3 | 99.7 | 0.0 | 2.71 | 0.46 | 0.49 | 0.77 | 1.54 | 4800 | 606 | 11 | 0 | 6 | 0 | 0 | logfile |
✔ | 8E2J | 27838 | 2024-01-17 | 2022-08-15 | 3.44 | 3.67 | 3.24 | 3.4 | 0.003 | 0.63 | 0.0 | 0.03 | 15.86 | 0.01 | 2.271 | 3.43 | 2.70 | 2.3 | 97.7 | 0.0 | -0.36 | 0.44 | 0.67 | 0.61 | 3.4 | 0.003 | 0.47 | 0.0 | 0.02 | 17.53 | 0.00 | 2.034 | 11.09 | 3.72 | 1.5 | 98.5 | 0.0 | 3.73 | 1.67 | 0.45 | 0.67 | 0.86 | 6012 | 346 | 4 | 0 | 114 | 0 | 2694 | logfile |
✔ | 8E48 | 27883 | 2024-01-19 | 2022-08-17 | 2.27 | 2.95 | 2.47 | 2.8 | 0.005 | 0.52 | 0.0 | 0.03 | 21.95 | 0.02 | 1.808 | 1.21 | 0.53 | 4.6 | 95.4 | 0.0 | 0.36 | 0.69 | 0.84 | 3.07 | 2.7 | 0.004 | 0.71 | 0.0 | 0.04 | 21.84 | 0.01 | 1.778 | 1.79 | 1.91 | 6.5 | 93.4 | 0.1 | -0.57 | 0.71 | 0.71 | 0.90 | 5.13 | 115959 | 1179 | 11 | 3016 | 1 | 0 | 41918 | logfile |
✔ | 8SZB | 40907 | 2024-01-17 | 2023-05-29 | 3.07 | 3.36 | 3.01 | 3.5 | 0.003 | 0.51 | 0.0 | 0.03 | 16.77 | 0.00 | 2.154 | 9.22 | 0.37 | 1.5 | 98.5 | 0.0 | 2.06 | 0.49 | 0.73 | 0.50 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 16.88 | 0.00 | 2.056 | 8.73 | 3.15 | 1.3 | 98.7 | 0.0 | 4.03 | 0.64 | 0.52 | 0.79 | 1.41 | 4962 | 612 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 8E35 | 27857 | 2024-01-19 | 2022-08-16 | 2.27 | 2.92 | 2.48 | 2.8 | 0.009 | 0.45 | 0.0 | 0.03 | 21.84 | 0.02 | 2.028 | 1.04 | 0.00 | 4.6 | 95.4 | 0.0 | 0.37 | 0.75 | 0.86 | 3.34 | 2.7 | 0.005 | 0.67 | 0.0 | 0.04 | 21.84 | 0.01 | 1.917 | 2.00 | 1.38 | 5.6 | 94.3 | 0.1 | -0.79 | 1.10 | 0.72 | 0.91 | 5.75 | 115840 | 1179 | 11 | 3016 | 1 | 1 | 41853 | logfile |
✔ | 8CWW | 27030 | 2024-01-20 | 2022-05-19 | 2.74 | 3.44 | 2.94 | 3.3 | 0.003 | 0.48 | 0.0 | 0.03 | 24.38 | 0.00 | 2.368 | 2.74 | 0.25 | 2.6 | 97.4 | 0.0 | 0.45 | 0.86 | 0.87 | 3.79 | 3.3 | 0.005 | 0.57 | 0.0 | 0.04 | 25.72 | 0.00 | 2.242 | 3.06 | 1.84 | 3.7 | 96.3 | 0.0 | 1.95 | 0.44 | 0.90 | 0.91 | 2.84 | 13625 | 962 | 12 | 292 | 2 | 0 | 0 | logfile |
✔ | 8E45 | 27880 | 2024-01-19 | 2022-08-17 | 2.3 | 2.93 | 2.71 | 2.8 | 0.005 | 0.39 | 0.0 | 0.03 | 22.10 | 0.02 | 1.957 | 1.35 | 0.74 | 4.5 | 95.4 | 0.2 | 0.33 | 0.71 | 0.90 | 5.24 | 2.8 | 0.004 | 0.60 | 0.0 | 0.04 | 22.10 | 0.01 | 1.910 | 2.11 | 1.59 | 5.9 | 93.8 | 0.3 | -0.41 | 0.59 | 0.70 | 0.90 | 5.59 | 115749 | 1179 | 11 | 3015 | 1 | 0 | 41831 | logfile |
✔ | 8G0L | 29657 | 2024-01-18 | 2023-01-31 | 3.39 | 4.48 | 3.47 | 3.9 | 0.003 | 0.48 | 0.0 | 0.03 | 16.94 | 0.00 | 2.289 | 5.58 | 0.10 | 2.0 | 98.0 | 0.0 | 3.32 | 0.93 | 0.90 | 2.06 | 3.9 | 0.002 | 0.49 | 0.0 | 0.03 | 17.16 | 0.00 | 2.276 | 5.69 | 1.33 | 2.0 | 98.0 | 0.0 | 3.35 | 0.18 | 0.93 | 0.90 | 2.00 | 8872 | 1088 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8T9H | 41111 | 2024-01-20 | 2023-06-24 | 3.37 | 4.11 | 3.37 | 3.5 | 0.003 | 0.52 | 0.0 | 0.03 | 24.90 | 0.00 | 2.255 | 10.80 | 0.97 | 2.4 | 97.6 | 0.0 | 1.98 | 0.88 | 0.83 | 2.57 | 3.5 | 0.004 | 0.59 | 0.0 | 0.04 | 25.86 | 0.00 | 2.162 | 14.11 | 1.33 | 3.1 | 96.9 | 0.0 | 2.20 | 1.15 | 0.88 | 0.85 | 2.07 | 12039 | 1003 | 11 | 201 | 0 | 0 | 0 | logfile |
✔ | 8E2H | 27836 | 2024-01-19 | 2022-08-15 | 2.3 | 2.41 | 2.27 | 2.4 | 0.003 | 0.60 | 0.0 | 0.03 | 15.28 | 0.00 | 1.980 | 6.85 | 0.52 | 1.1 | 98.9 | 0.0 | 1.61 | 0.65 | 0.82 | 4.36 | 2.4 | 0.004 | 0.58 | 0.0 | 0.03 | 15.94 | 0.00 | 1.971 | 7.33 | 2.95 | 1.0 | 99.0 | 0.0 | 2.70 | 0.93 | 0.65 | 0.83 | 4.00 | 10412 | 656 | 1 | 0 | 0 | 40 | 5280 | logfile |
✔ | 8EX9 | 28655 | 2024-01-17 | 2022-10-25 | 2.96 | 3.27 | 3.00 | 3.2 | 0.003 | 0.49 | 0.0 | 0.03 | 23.30 | 0.00 | 2.200 | 13.65 | 0.79 | 4.3 | 95.7 | 0.0 | -1.52 | 0.60 | 0.71 | 4.83 | 3.2 | 0.005 | 0.61 | 0.0 | 0.03 | 23.28 | 0.00 | 2.130 | 15.23 | 5.56 | 5.6 | 94.4 | 0.0 | -0.92 | 0.26 | 0.63 | 0.73 | 4.21 | 4199 | 166 | 4 | 139 | 0 | 0 | 0 | logfile |
✔ | 8CXM | 27060 | 2024-01-18 | 2022-05-21 | 3.21 | 3.69 | 3.21 | 3.6 | 0.003 | 0.50 | 0.0 | 0.03 | 14.84 | 0.00 | 2.093 | 8.38 | 0.06 | 4.1 | 95.9 | 0.0 | 3.68 | 0.56 | 0.87 | 1.34 | 3.5 | 0.003 | 0.50 | 0.0 | 0.03 | 16.21 | 0.00 | 2.127 | 6.46 | 1.07 | 4.1 | 95.9 | 0.0 | 4.80 | 1.14 | 0.57 | 0.88 | 1.43 | 109560 | 14685 | 55 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SRM | 40735 | 2024-01-17 | 2023-05-05 | 4.46 | 5.07 | 4.47 | 4.4 | 0.003 | 0.51 | 0.0 | 0.03 | 4.38 | 0.00 | 2.233 | 4.32 | 0.00 | 4.0 | 96.0 | 0.0 | 2.57 | 0.82 | 0.84 | — | 4.3 | 0.006 | 0.64 | 0.0 | 0.04 | 5.47 | 0.00 | 2.070 | 5.40 | 0.00 | 7.2 | 92.8 | 0.0 | -0.25 | 1.59 | 0.83 | 0.86 | — | 5773 | 1163 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oDR | 12845 | 2024-01-17 | 2021-04-30 | 2.9 | 3.11 | — | 3.0 | 0.002 | 0.41 | 0.0 | 0.03 | 15.66 | 0.02 | 1.963 | 4.98 | 0.44 | 1.1 | 98.9 | 0.0 | 0.96 | 0.74 | 0.80 | 3.31 | 3.0 | 0.004 | 0.73 | 0.0 | 0.04 | 18.42 | 0.01 | 1.860 | 10.47 | 2.49 | 2.3 | 97.7 | 0.0 | 0.68 | 1.25 | 0.77 | 0.84 | 2.84 | 107464 | 9244 | 68 | 1489 | 135 | 0 | 0 | logfile |
✔ | 7oDT | 12847 | 2024-01-18 | 2021-04-30 | 3.1 | 3.31 | — | 3.1 | 0.003 | 0.41 | 0.0 | 0.03 | 15.51 | 0.01 | 1.988 | 5.28 | 0.53 | 1.2 | 98.8 | 0.0 | 1.05 | 0.77 | 0.79 | 2.84 | 3.1 | 0.004 | 0.68 | 1.0 | 0.04 | 18.00 | 0.00 | 1.787 | 12.78 | 2.51 | 3.3 | 96.7 | 0.0 | 0.38 | 0.70 | 0.78 | 0.83 | 2.48 | 110473 | 9585 | 71 | 1526 | 110 | 0 | 0 | logfile |
✔ | 8FZR | 29638 | 2024-01-17 | 2023-01-29 | 3.6 | 5.09 | 4.10 | 4.1 | 0.002 | 0.48 | 0.0 | 0.03 | 19.69 | 0.00 | 2.234 | 12.34 | 6.97 | 4.6 | 94.4 | 1.0 | -1.87 | 0.52 | 0.24 | 0.50 | 4.2 | 0.003 | 0.69 | 0.0 | 0.04 | 21.97 | 0.00 | 2.196 | 20.70 | 3.82 | 5.6 | 94.2 | 0.2 | -1.55 | 1.66 | 0.83 | 0.65 | 0.87 | 5711 | 503 | 3 | 77 | 1 | 0 | 0 | logfile |
✔ | 8ESR | 24422 | 2024-01-19 | 2022-10-14 | 3.2 | 3.24 | — | 3.0 | 0.002 | 0.47 | 0.0 | 0.03 | 20.73 | 0.00 | 2.118 | 7.71 | 0.28 | 3.0 | 96.9 | 0.1 | 0.71 | 0.76 | 0.74 | 2.20 | 3.0 | 0.004 | 0.55 | 0.0 | 0.04 | 20.45 | 0.00 | 2.096 | 10.13 | 2.63 | 3.8 | 96.1 | 0.1 | 1.10 | 0.34 | 0.78 | 0.77 | 2.12 | 116762 | 9286 | 57 | 2372 | 1 | 0 | 0 | logfile |