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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8Q9i | 18282 | 2024-01-17 | 2023-08-20 | 2.56 | 2.01 | 2.38 | 2.2 | 0.011 | 1.80 | 0.0 | 0.08 | 11.44 | 0.01 | 2.520 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -1.34 | 0.29 | 0.75 | 7.51 | 2.2 | 0.003 | 0.59 | 0.0 | 0.05 | 16.79 | 0.00 | 2.225 | 0.59 | 0.52 | 0.5 | 99.5 | 0.0 | -1.59 | 1.47 | 0.37 | 0.86 | 7.22 | 3411 | 219 | 3 | 0 | 0 | 0 | 1740 | logfile |
✔ | 7QJY | 14026 | 2024-01-17 | 2021-12-17 | 3.14 | 2.93 | 3.08 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.32 | 0.01 | 2.519 | 0.00 | 0.25 | 5.7 | 94.3 | 0.0 | -2.50 | 0.38 | 0.82 | 5.27 | 3.1 | 0.005 | 0.73 | 0.0 | 0.05 | 17.15 | 0.00 | 2.130 | 8.40 | 1.52 | 2.7 | 97.3 | 0.0 | -2.07 | 2.60 | 0.35 | 0.83 | 4.04 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JBS | 6478 | 2024-01-17 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.003 | 0.64 | 0.0 | 0.04 | 17.82 | 0.00 | 2.204 | 8.27 | 3.29 | 2.9 | 97.1 | 0.0 | 0.53 | 1.83 | 0.21 | 0.82 | 3.71 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CoZ | 7545 | 2024-01-17 | 2018-03-13 | 3.36 | 4.78 | — | 4.7 | 0.009 | 1.71 | 0.0 | 0.07 | 5.63 | 0.01 | 2.541 | 0.00 | 0.00 | 3.2 | 96.2 | 0.6 | -2.49 | 0.78 | 0.68 | — | 4.4 | 0.003 | 0.85 | 0.0 | 0.04 | 5.41 | 0.00 | 2.334 | 6.19 | 0.00 | 9.6 | 90.4 | 0.0 | -1.73 | 1.59 | 0.82 | 0.77 | — | 1586 | 320 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCA | 12264 | 2024-01-19 | 2021-01-28 | 3.47 | 3.58 | 3.04 | 3.6 | 0.012 | 2.04 | 0.0 | 0.08 | 10.64 | 0.01 | 2.645 | 0.00 | 0.19 | 5.5 | 94.5 | 0.0 | -2.04 | 0.73 | 0.85 | 4.45 | 3.7 | 0.002 | 0.50 | 0.0 | 0.05 | 13.26 | 0.00 | 2.431 | 0.86 | 1.16 | 4.8 | 95.2 | 0.0 | -2.93 | 0.76 | 0.70 | 0.85 | 3.55 | 10428 | 732 | 12 | 0 | 0 | 0 | 5376 | logfile |
✔ | 7QL0 | 14059 | 2024-01-17 | 2021-12-19 | 3.13 | 2.96 | 2.97 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.06 | 0.01 | 2.510 | 0.00 | 0.00 | 4.0 | 96.0 | 0.0 | -2.04 | 0.39 | 0.77 | 6.02 | 3.1 | 0.003 | 0.57 | 0.0 | 0.05 | 14.55 | 0.00 | 2.056 | 6.27 | 1.67 | 1.2 | 98.8 | 0.0 | -1.68 | 1.26 | 0.42 | 0.84 | 5.97 | 6390 | 414 | 6 | 0 | 0 | 0 | 3258 | logfile |
✔ | 7UXU | 26862 | 2024-01-18 | 2022-05-06 | 2.74 | 3.09 | 2.80 | 3.1 | 0.007 | 1.01 | 0.0 | 0.06 | 17.35 | 0.01 | 2.519 | 0.00 | 0.00 | 1.9 | 98.1 | 0.0 | -0.46 | 0.58 | 0.88 | 5.36 | 3.0 | 0.002 | 0.49 | 0.0 | 0.04 | 16.80 | 0.00 | 2.198 | 1.48 | 0.21 | 1.9 | 98.1 | 0.0 | 0.82 | 1.29 | 0.52 | 0.85 | 4.14 | 8776 | 536 | 8 | 0 | 4 | 0 | 4268 | logfile |
✔ | 7ADM | 11731 | 2024-01-18 | 2020-09-15 | 3.5 | 3.77 | 3.57 | 3.8 | 0.013 | 1.98 | 3.0 | 0.11 | 15.37 | 0.02 | 2.582 | 0.00 | 0.73 | 11.9 | 88.1 | 0.0 | -2.91 | 0.49 | 0.70 | 2.46 | 3.8 | 0.002 | 0.61 | 0.0 | 0.04 | 16.71 | 0.00 | 2.104 | 9.36 | 2.20 | 7.2 | 92.8 | 0.0 | -1.51 | 0.91 | 0.49 | 0.69 | 2.72 | 9726 | 614 | 1 | 0 | 0 | 0 | 4799 | logfile |
✔ | 7QK3 | 14030 | 2024-01-17 | 2021-12-17 | 2.44 | 2.73 | 2.35 | 2.7 | 0.010 | 2.07 | 0.0 | 0.11 | 12.55 | 0.01 | 2.519 | 0.00 | 0.00 | 3.4 | 96.6 | 0.0 | -3.04 | 0.38 | 0.77 | 5.65 | 2.7 | 0.003 | 0.71 | 0.0 | 0.05 | 16.12 | 0.00 | 2.301 | 3.28 | 0.64 | 3.4 | 96.6 | 0.0 | -2.70 | 2.37 | 0.39 | 0.82 | 5.12 | 2742 | 183 | 3 | 0 | 0 | 0 | 1407 | logfile |
✔ | 7QKG | 14041 | 2024-01-17 | 2021-12-17 | 3.36 | 3.19 | 3.09 | 3.4 | 0.010 | 2.03 | 0.0 | 0.10 | 10.76 | 0.01 | 2.528 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.98 | 0.38 | 0.80 | 4.23 | 3.5 | 0.003 | 0.61 | 0.0 | 0.05 | 13.69 | 0.00 | 2.227 | 6.89 | 0.69 | 5.1 | 94.9 | 0.0 | -1.58 | 1.17 | 0.36 | 0.83 | 4.96 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✔ | 7JSH | 22454 | 2024-01-18 | 2020-08-14 | 4.4 | 7.07 | — | 17.0 | 0.001 | 0.20 | 0.0 | 0.02 | 8.81 | 0.00 | 2.581 | 0.00 | 0.00 | 13.1 | 83.7 | 3.2 | -3.27 | 0.49 | 0.25 | — | 5.3 | 0.005 | 1.30 | 0.0 | 0.05 | 13.69 | 0.01 | 1.942 | 27.17 | 0.00 | 31.8 | 67.9 | 0.3 | -5.48 | 6.11 | 0.73 | 0.61 | — | 7916 | 1904 | 8 | 15 | 0 | 0 | 0 | logfile |
✔ | 7QVF | 14176 | 2024-01-17 | 2022-01-21 | 3.64 | 3.54 | 3.42 | 4.1 | 0.012 | 2.10 | 22.0 | 0.12 | 15.51 | 0.01 | 2.525 | 0.00 | 0.53 | 6.0 | 94.0 | 0.0 | -2.41 | 0.43 | 0.77 | 3.90 | 3.6 | 0.007 | 0.90 | 0.0 | 0.06 | 16.90 | 0.00 | 2.078 | 16.13 | 3.84 | 6.8 | 93.2 | 0.0 | -2.55 | 3.84 | 0.39 | 0.75 | 3.83 | 6516 | 810 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oRG | 17123 | 2024-01-17 | 2023-04-13 | 2.3 | 2.70 | 2.18 | 2.6 | 0.010 | 1.26 | 0.0 | 0.08 | 11.92 | 0.01 | 2.462 | 0.00 | 0.00 | 2.4 | 97.6 | 0.0 | -2.52 | 0.32 | 0.76 | 4.82 | 2.6 | 0.002 | 0.52 | 0.0 | 0.05 | 16.29 | 0.00 | 2.322 | 2.52 | 0.88 | 2.0 | 98.0 | 0.0 | -2.48 | 1.13 | 0.38 | 0.83 | 4.34 | 3966 | 258 | 3 | 0 | 0 | 0 | 2025 | logfile |
✔ | 7QVC | 14174 | 2024-01-17 | 2022-01-21 | 2.64 | 2.62 | 2.62 | 2.6 | 0.012 | 2.09 | 10.0 | 0.12 | 15.49 | 0.01 | 2.525 | 0.00 | 0.53 | 5.8 | 94.2 | 0.0 | -2.45 | 0.43 | 0.86 | 7.41 | 2.7 | 0.005 | 0.74 | 0.0 | 0.06 | 18.06 | 0.00 | 2.133 | 9.23 | 4.23 | 5.5 | 94.5 | 0.0 | -2.30 | 1.00 | 0.42 | 0.89 | 5.81 | 3255 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9Q | 24259 | 2024-01-17 | 2021-06-18 | 4.6 | 4.92 | — | 2.3 | 0.002 | 0.88 | 0.0 | 0.00 | 5.65 | 0.00 | 2.600 | 0.00 | 0.00 | 8.9 | 90.3 | 0.8 | -1.59 | 0.79 | 0.69 | — | 2.5 | 0.003 | 1.00 | 0.0 | 0.00 | 5.05 | 0.00 | 2.580 | 6.76 | 0.00 | 12.3 | 86.7 | 0.9 | -4.51 | 2.40 | 0.85 | 0.81 | — | 6945 | 2315 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKi | 14043 | 2024-01-18 | 2021-12-17 | 3.13 | 3.29 | 3.04 | 3.2 | 0.011 | 1.99 | 3.0 | 0.10 | 9.18 | 0.01 | 2.508 | 0.00 | 0.00 | 10.1 | 89.9 | 0.0 | -1.50 | 0.41 | 0.79 | 6.28 | 3.3 | 0.003 | 0.60 | 0.0 | 0.05 | 11.76 | 0.00 | 2.102 | 5.09 | 0.00 | 4.5 | 95.5 | 0.0 | -1.88 | 0.69 | 0.39 | 0.81 | 5.64 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 8KB5 | 37070 | 2024-01-19 | 2023-08-03 | 2.26133 | 2.35 | 2.23 | 2.3 | 0.007 | 0.98 | 0.0 | 0.05 | 28.08 | 0.01 | 2.377 | 0.00 | 0.00 | 0.7 | 99.3 | 0.0 | 2.15 | 0.79 | 0.85 | 3.73 | 2.3 | 0.003 | 0.58 | 0.0 | 0.03 | 28.28 | 0.00 | 2.139 | 4.23 | 1.43 | 1.1 | 98.9 | 0.0 | 2.93 | 0.23 | 0.78 | 0.85 | 3.55 | 11953 | 758 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 8oRE | 17121 | 2024-01-17 | 2023-04-13 | 2.5 | 2.67 | 2.44 | 2.7 | 0.011 | 2.09 | 7.0 | 0.14 | 10.93 | 0.01 | 2.570 | 0.00 | 0.00 | 8.0 | 92.0 | 0.0 | -2.10 | 0.32 | 0.74 | 5.29 | 2.7 | 0.003 | 0.63 | 0.0 | 0.05 | 17.76 | 0.00 | 2.184 | 2.49 | 1.49 | 6.7 | 93.3 | 0.0 | -1.76 | 3.45 | 0.36 | 0.80 | 5.16 | 3615 | 231 | 3 | 0 | 0 | 0 | 1845 | logfile |
✔ | 8Q7F | 18215 | 2024-01-17 | 2023-08-16 | 3.72 | 2.86 | 3.58 | 3.2 | 0.011 | 1.88 | 2.0 | 0.10 | 12.87 | 0.01 | 2.492 | 0.00 | 0.00 | 1.1 | 98.9 | 0.0 | -1.74 | 0.32 | 0.74 | 3.87 | 3.2 | 0.003 | 0.68 | 0.0 | 0.05 | 15.64 | 0.00 | 2.107 | 8.23 | 1.03 | 0.7 | 99.3 | 0.0 | -1.47 | 0.79 | 0.39 | 0.81 | 3.84 | 3402 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QCR | 18333 | 2024-01-17 | 2023-08-28 | 2.75 | 2.70 | 2.59 | 2.9 | 0.011 | 1.78 | 0.0 | 0.08 | 9.60 | 0.01 | 2.505 | 0.00 | 0.00 | 3.0 | 97.0 | 0.0 | -1.85 | 0.33 | 0.79 | 7.24 | 2.9 | 0.002 | 0.52 | 0.0 | 0.05 | 15.45 | 0.00 | 2.235 | 4.13 | 0.56 | 0.0 | 100.0 | 0.0 | -0.47 | 1.40 | 0.39 | 0.87 | 7.08 | 3153 | 204 | 3 | 0 | 0 | 0 | 1608 | logfile |