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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7oTi | 13060 | 2024-01-18 | 2021-06-10 | 4.2 | 4.80 | — | 7.9 | 0.014 | 1.99 | 12.0 | 0.10 | 16.95 | 0.02 | 2.507 | 0.59 | 4.71 | 10.8 | 87.9 | 1.4 | -3.63 | 0.36 | 0.23 | — | 4.9 | 0.003 | 0.81 | 0.0 | 0.04 | 14.46 | 0.00 | 2.116 | 16.85 | 0.00 | 6.6 | 92.9 | 0.5 | -1.00 | 1.72 | 0.51 | 0.49 | — | 9171 | 1182 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WQX | 32715 | 2024-01-17 | 2022-01-26 | 2.7 | 2.26 | — | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 11.77 | 0.00 | 2.181 | 9.03 | 2.56 | 6.0 | 94.0 | 0.0 | -3.61 | 0.73 | 0.65 | 2.93 | 3.2 | 0.003 | 0.71 | 0.0 | 0.05 | 14.33 | 0.00 | 2.191 | 14.76 | 2.33 | 7.2 | 92.8 | 0.0 | -1.64 | 0.83 | 0.76 | 0.69 | 2.01 | 4022 | 501 | 1 | 0 | 9 | 0 | 0 | logfile |
✔ | 7oCH | 12807 | 2024-01-18 | 2021-04-26 | 3.14 | 3.53 | 3.21 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 15.97 | 0.00 | 2.072 | 3.99 | 3.80 | 6.6 | 93.4 | 0.0 | -2.88 | 0.89 | 0.86 | 2.83 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 16.42 | 0.00 | 2.018 | 4.31 | 3.61 | 7.5 | 92.5 | 0.0 | 0.17 | 0.48 | 0.90 | 0.90 | 2.46 | 9516 | 1181 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6XMP | 22260 | 2024-01-18 | 2020-06-30 | 3.5 | 4.29 | 3.63 | 4.0 | 0.007 | 0.78 | 0.0 | 0.04 | 13.27 | 0.00 | 2.192 | 6.56 | 0.00 | 2.9 | 97.1 | 0.0 | -1.66 | 0.72 | 0.84 | 1.55 | 4.0 | 0.004 | 0.55 | 0.0 | 0.04 | 14.47 | 0.00 | 2.171 | 6.62 | 1.00 | 3.5 | 96.5 | 0.0 | 1.15 | 0.34 | 0.71 | 0.86 | 1.29 | 8545 | 1086 | 1 | 0 | 12 | 0 | 0 | logfile |
✔ | 7oE3 | 12860 | 2024-01-19 | 2021-05-01 | 3.35 | 4.05 | 3.43 | 3.4 | 0.003 | 0.52 | 0.0 | 0.04 | 15.39 | 0.00 | 2.179 | 5.99 | 3.39 | 8.2 | 91.8 | 0.0 | -2.02 | 0.92 | 0.87 | 2.22 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 16.20 | 0.00 | 2.088 | 8.93 | 2.95 | 8.8 | 91.2 | 0.0 | 0.24 | 0.42 | 0.93 | 0.90 | 1.94 | 11904 | 1478 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7N72 | 24217 | 2024-01-18 | 2021-06-09 | 2.5 | 3.08 | 2.57 | 2.9 | 0.007 | 1.35 | 0.0 | 0.06 | 13.13 | 0.01 | 1.971 | 6.06 | 0.00 | 1.4 | 98.6 | 0.0 | -0.87 | 0.72 | 0.85 | 3.04 | 2.9 | 0.003 | 0.85 | 0.0 | 0.04 | 14.12 | 0.00 | 1.656 | 6.05 | 0.54 | 2.1 | 97.9 | 0.0 | 2.32 | 0.44 | 0.71 | 0.86 | 2.63 | 7705 | 1030 | 1 | 0 | 11 | 5 | 0 | logfile |
✔ | 6WBX | 21600 | 2024-01-18 | 2020-03-27 | 3.5 | 3.82 | 3.55 | 3.7 | 0.012 | 1.07 | 0.0 | 0.06 | 13.49 | 0.01 | 2.190 | 4.07 | 0.11 | 7.9 | 92.0 | 0.1 | -5.51 | 0.77 | 0.87 | 3.70 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 14.03 | 0.00 | 2.200 | 6.82 | 1.32 | 4.4 | 95.6 | 0.0 | -1.68 | 0.41 | 0.74 | 0.85 | 2.69 | 9170 | 1264 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7o3D | 12704 | 2024-01-19 | 2021-04-01 | 3.71 | 4.15 | 3.79 | 4.0 | 0.003 | 0.77 | 0.0 | 0.05 | 13.17 | 0.01 | 2.146 | 6.21 | 0.00 | 4.2 | 95.8 | 0.0 | -0.61 | 0.76 | 0.72 | 1.16 | 3.9 | 0.002 | 0.51 | 0.0 | 0.04 | 15.35 | 0.00 | 2.031 | 7.61 | 1.57 | 4.4 | 95.6 | 0.0 | 0.60 | 0.45 | 0.76 | 0.72 | 1.34 | 11458 | 709 | 1 | 0 | 0 | 0 | 5694 | logfile |
✔ | 7ZJ5 | 14741 | 2024-01-19 | 2022-04-08 | 4.55 | 5.91 | 5.09 | 4.4 | 0.002 | 0.65 | 0.0 | 0.04 | 22.71 | 0.00 | 2.256 | 0.50 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.92 | 0.85 | — | 4.5 | 0.008 | 0.90 | 0.0 | 0.04 | 25.73 | 0.01 | 1.622 | 78.91 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.97 | 0.93 | 0.87 | — | 12014 | 0 | 1 | 374 | 1 | 0 | 4030 | logfile |
✔ | 6XMQ | 22261 | 2024-01-18 | 2020-06-30 | 3.7 | 4.26 | 3.79 | 4.0 | 0.006 | 0.66 | 0.0 | 0.04 | 13.16 | 0.00 | 1.660 | 6.11 | 0.00 | 3.7 | 96.3 | 0.0 | -1.63 | 0.72 | 0.85 | 1.50 | 4.0 | 0.003 | 0.54 | 0.0 | 0.04 | 14.93 | 0.00 | 1.998 | 6.47 | 1.80 | 2.9 | 97.1 | 0.0 | 0.70 | 1.27 | 0.72 | 0.85 | 1.17 | 8362 | 1085 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8C4S | 16427 | 2024-01-19 | 2023-01-04 | 3.27 | 3.46 | 3.25 | 3.3 | 0.005 | 0.85 | 6.0 | 0.05 | 15.99 | 0.00 | 2.258 | 8.25 | 1.24 | 2.9 | 96.9 | 0.2 | 1.15 | 0.82 | 0.85 | 2.80 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 16.23 | 0.00 | 2.189 | 8.06 | 2.47 | 2.7 | 97.1 | 0.2 | 1.67 | 0.35 | 0.82 | 0.86 | 3.08 | 10292 | 1277 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XSM | 33427 | 2024-01-19 | 2022-05-14 | 4.01 | 4.70 | 4.03 | 4.0 | 0.002 | 0.47 | 0.0 | 0.03 | 23.32 | 0.00 | 1.969 | 7.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.75 | — | 4.0 | 0.007 | 0.77 | 0.0 | 0.04 | 25.83 | 0.01 | 1.773 | 50.53 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.72 | 0.92 | 0.82 | — | 12464 | 0 | 1 | 388 | 0 | 0 | 4165 | logfile |
✔ | 7N98 | 24252 | 2024-01-17 | 2021-06-17 | 3.5 | 3.78 | 3.89 | 4.0 | 0.004 | 0.72 | 0.0 | 0.05 | 13.69 | 0.01 | 2.217 | 11.62 | 0.27 | 8.5 | 91.5 | 0.0 | -1.56 | 0.51 | 0.82 | 3.02 | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.79 | 0.00 | 2.349 | 7.88 | 2.41 | 7.0 | 93.0 | 0.0 | -0.03 | 0.48 | 0.50 | 0.81 | 1.16 | 3625 | 473 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QFP | 13946 | 2024-01-19 | 2021-12-06 | 3.7 | 4.43 | 3.74 | 4.1 | 0.007 | 1.11 | 4.0 | 0.08 | 15.77 | 0.01 | 2.167 | 19.15 | 4.14 | 12.5 | 86.9 | 0.6 | -4.48 | 0.84 | 0.72 | 0.85 | 4.1 | 0.003 | 0.75 | 0.0 | 0.05 | 17.04 | 0.00 | 2.107 | 15.47 | 3.70 | 11.5 | 88.4 | 0.1 | -2.94 | 0.77 | 0.85 | 0.76 | 0.45 | 9996 | 1233 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6JNC | 9847 | 2024-01-17 | 2019-03-14 | 3.7 | 3.76 | — | 3.8 | 0.009 | 0.87 | 0.0 | 0.05 | 14.72 | 0.01 | 2.304 | 3.18 | 9.09 | 4.8 | 95.2 | 0.0 | -5.69 | 0.46 | 0.78 | 1.61 | 3.8 | 0.004 | 0.59 | 0.0 | 0.04 | 15.88 | 0.00 | 2.120 | 5.30 | 4.40 | 3.6 | 96.4 | 0.0 | -0.94 | 1.51 | 0.52 | 0.88 | 2.32 | 3294 | 419 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6LR0 | 31583 | 2024-01-18 | 2020-01-15 | 3.5 | 3.87 | — | 3.8 | 0.011 | 1.38 | 0.0 | 0.07 | 13.07 | 0.01 | 2.291 | 5.77 | 0.88 | 11.0 | 88.9 | 0.1 | -6.35 | 0.66 | 0.78 | 1.71 | 3.8 | 0.003 | 0.73 | 0.0 | 0.04 | 15.67 | 0.00 | 2.193 | 9.36 | 2.92 | 7.3 | 92.7 | 0.0 | -3.73 | 0.80 | 0.63 | 0.75 | 0.81 | 9576 | 1230 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KZo | 0791 | 2024-01-18 | 2019-09-25 | 3.3 | 3.57 | — | 3.5 | 0.014 | 1.41 | 3.0 | 0.10 | 16.98 | 0.01 | 2.196 | 36.78 | 9.01 | 3.3 | 96.0 | 0.7 | -1.32 | 0.60 | 0.82 | 2.55 | 3.5 | 0.003 | 0.73 | 0.0 | 0.04 | 16.59 | 0.00 | 2.122 | 8.32 | 3.86 | 3.5 | 96.4 | 0.1 | 1.39 | 1.31 | 0.58 | 0.83 | 2.01 | 8238 | 967 | 1 | 0 | 22 | 0 | 0 | logfile |
✔ | 6XoT | 22279 | 2024-01-18 | 2020-07-07 | 3.9 | 4.56 | 3.90 | 4.1 | 0.006 | 1.07 | 0.0 | 0.06 | 14.01 | 0.01 | 2.272 | 5.76 | 0.23 | 2.8 | 97.2 | 0.0 | -1.51 | 0.86 | 0.74 | 0.81 | 4.2 | 0.003 | 0.82 | 0.0 | 0.05 | 15.95 | 0.00 | 2.097 | 17.28 | 1.40 | 2.6 | 97.4 | 0.0 | 0.90 | 1.81 | 0.87 | 0.80 | 1.12 | 7704 | 966 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PN1 | 13545 | 2024-01-19 | 2021-09-04 | 3.9 | 4.15 | 3.83 | 4.0 | 0.002 | 0.57 | 0.0 | 0.04 | 12.95 | 0.00 | 2.053 | 6.26 | 0.00 | 2.8 | 97.2 | 0.0 | 1.31 | 0.61 | 0.80 | 1.17 | 4.0 | 0.002 | 0.53 | 0.0 | 0.04 | 14.60 | 0.00 | 1.949 | 6.65 | 0.89 | 2.9 | 97.1 | 0.0 | 1.62 | 0.97 | 0.60 | 0.79 | 0.56 | 10384 | 657 | 1 | 0 | 0 | 0 | 5237 | logfile |
✔ | 7QKS | 14050 | 2024-01-18 | 2021-12-18 | 3.1 | 3.39 | 3.08 | 3.3 | 0.005 | 0.74 | 0.0 | 0.05 | 14.59 | 0.01 | 2.210 | 4.65 | 0.10 | 1.8 | 98.2 | 0.0 | 0.65 | 0.75 | 0.87 | 2.33 | 3.3 | 0.003 | 0.52 | 0.0 | 0.04 | 15.48 | 0.00 | 2.295 | 5.61 | 1.78 | 1.8 | 98.2 | 0.0 | 1.32 | 0.35 | 0.74 | 0.89 | 1.84 | 9339 | 1199 | 1 | 0 | 1 | 0 | 0 | logfile |