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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7MC0 | 23752 | 2024-01-18 | 2021-04-01 | 3.3 | 3.73 | — | 3.7 | 0.012 | 1.62 | 8.0 | 0.10 | 12.73 | 0.01 | 1.925 | 7.84 | 1.19 | 3.9 | 95.8 | 0.3 | -0.86 | 0.65 | 0.81 | 2.48 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 14.71 | 0.00 | 2.242 | 5.77 | 1.32 | 4.0 | 96.0 | 0.0 | 0.88 | 1.04 | 0.63 | 0.81 | 2.29 | 7092 | 931 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M3L | 23656 | 2024-01-17 | 2021-03-18 | 3.2 | 4.99 | — | 3.3 | 0.009 | 0.97 | 0.0 | 0.06 | 15.05 | 0.01 | 1.551 | 6.78 | 0.30 | 9.1 | 90.6 | 0.3 | -3.19 | 0.29 | 0.38 | 0.40 | 3.1 | 0.004 | 0.76 | 0.0 | 0.04 | 15.43 | 0.00 | 2.143 | 17.65 | 2.11 | 8.6 | 91.3 | 0.1 | -1.11 | 3.79 | 0.46 | 0.76 | 2.18 | 6113 | 775 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WWZ | 21950 | 2024-01-18 | 2020-05-09 | 3.34 | 3.53 | — | 3.5 | 0.014 | 1.77 | 0.0 | 0.09 | 13.13 | 0.00 | 2.318 | 2.07 | 0.10 | 4.4 | 95.6 | 0.0 | -3.33 | 0.56 | 0.77 | 2.93 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 15.36 | 0.00 | 2.183 | 3.08 | 2.61 | 3.4 | 96.6 | 0.0 | 0.03 | 1.04 | 0.71 | 0.86 | 2.68 | 9450 | 1211 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WU3 | 21904 | 2024-01-20 | 2020-05-04 | 3.16 | 3.62 | 3.40 | 3.5 | 0.008 | 0.60 | 0.0 | 0.04 | 15.89 | 0.00 | 2.057 | 9.10 | 6.27 | 8.4 | 91.6 | 0.0 | -3.62 | 0.61 | 0.85 | 2.96 | 3.6 | 0.003 | 0.56 | 0.0 | 0.03 | 16.05 | 0.00 | 1.986 | 8.59 | 3.28 | 5.1 | 94.9 | 0.0 | 1.28 | 1.85 | 0.61 | 0.87 | 2.82 | 13610 | 890 | 2 | 0 | 0 | 0 | 6936 | logfile |
✔ | 6PPB | 20432 | 2024-01-19 | 2019-07-06 | 4.3 | 4.18 | 3.99 | 4.2 | 0.006 | 0.97 | 0.0 | 0.05 | 10.22 | 0.01 | 2.200 | 4.21 | 0.31 | 4.9 | 95.0 | 0.1 | -4.52 | 0.47 | 0.79 | — | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 13.51 | 0.00 | 2.085 | 10.47 | 0.06 | 4.8 | 95.2 | 0.0 | -1.44 | 1.37 | 0.49 | 0.82 | — | 62671 | 7953 | 19 | 0 | 0 | 0 | 0 | logfile |
✔ | 8KB5 | 37070 | 2024-01-19 | 2023-08-03 | 2.26133 | 2.35 | 2.23 | 2.3 | 0.007 | 0.98 | 0.0 | 0.05 | 28.08 | 0.01 | 2.377 | 0.00 | 0.00 | 0.7 | 99.3 | 0.0 | 2.15 | 0.79 | 0.85 | 3.73 | 2.3 | 0.003 | 0.58 | 0.0 | 0.03 | 28.28 | 0.00 | 2.139 | 4.23 | 1.43 | 1.1 | 98.9 | 0.0 | 2.93 | 0.23 | 0.78 | 0.85 | 3.55 | 11953 | 758 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 7oXR | 13104 | 2024-01-20 | 2021-06-22 | 3.3 | 3.13 | 2.94 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 16.46 | 0.01 | 1.998 | 8.45 | 0.00 | 2.4 | 97.6 | 0.0 | -1.36 | 0.77 | 0.87 | 4.32 | 3.1 | 0.005 | 1.00 | 2.0 | 0.05 | 18.24 | 0.01 | 1.789 | 6.69 | 1.43 | 2.8 | 97.2 | 0.0 | -0.30 | 1.30 | 0.78 | 0.91 | 3.74 | 13670 | 1700 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RAM | 24369 | 2024-01-19 | 2021-07-02 | 3.43 | 4.07 | 3.55 | 4.0 | 0.002 | 0.57 | 0.0 | 0.04 | 14.51 | 0.00 | 2.154 | 7.54 | 0.00 | 4.4 | 95.6 | 0.0 | -0.56 | 0.72 | 0.76 | 2.24 | 4.0 | 0.003 | 0.62 | 0.0 | 0.04 | 16.18 | 0.00 | 2.187 | 8.80 | 1.70 | 5.1 | 94.9 | 0.0 | -0.37 | 0.34 | 0.72 | 0.78 | 1.55 | 12006 | 1497 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W9i | 32367 | 2024-01-17 | 2021-12-09 | 3.4 | 3.65 | — | 3.7 | 0.005 | 0.72 | 0.0 | 0.05 | 14.90 | 0.01 | 2.289 | 3.91 | 0.00 | 4.8 | 95.2 | 0.0 | -5.48 | 0.68 | 0.80 | 2.34 | 3.7 | 0.003 | 0.59 | 0.0 | 0.04 | 16.38 | 0.00 | 2.216 | 7.43 | 2.16 | 2.5 | 97.5 | 0.0 | -1.09 | 1.19 | 0.66 | 0.81 | 2.18 | 6412 | 791 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TiL | 25913 | 2024-01-17 | 2022-01-13 | 3.7 | 4.37 | 3.77 | 4.0 | 0.002 | 0.54 | 0.0 | 0.04 | 13.78 | 0.00 | 2.253 | 8.12 | 0.00 | 3.8 | 96.2 | 0.0 | 0.14 | 0.87 | 0.79 | 1.33 | 4.0 | 0.003 | 0.70 | 0.0 | 0.04 | 15.91 | 0.00 | 2.213 | 12.52 | 1.15 | 4.5 | 95.5 | 0.0 | 0.52 | 1.75 | 0.88 | 0.84 | 1.85 | 5815 | 739 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UR5 | 26705 | 2024-01-17 | 2022-04-21 | 2.6 | 2.89 | 2.82 | 2.9 | 0.008 | 1.48 | 0.0 | 0.11 | 28.78 | 0.01 | 2.204 | 2.44 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.58 | — | 2.9 | 0.006 | 0.89 | 0.0 | 0.05 | 26.17 | 0.01 | 2.007 | 15.80 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.85 | 0.08 | 0.66 | — | 5709 | 0 | 3 | 270 | 0 | 0 | 0 | logfile |
✔ | 7L2Z | 23146 | 2024-01-18 | 2020-12-17 | 3.4 | 3.78 | — | 3.7 | 0.002 | 0.50 | 1.0 | 0.05 | 12.49 | 0.00 | 1.866 | 2.68 | 0.63 | 3.6 | 96.4 | 0.0 | -2.91 | 0.74 | 0.75 | 1.52 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 14.08 | 0.00 | 1.849 | 6.76 | 2.34 | 6.1 | 93.9 | 0.0 | -1.20 | 0.78 | 0.77 | 0.83 | 2.13 | 59631 | 3866 | 6 | 0 | 0 | 0 | 29676 | logfile |
✔ | 7U23 | 26306 | 2024-01-19 | 2022-02-22 | 4.6 | 5.00 | 4.74 | 4.6 | 0.004 | 0.59 | 0.0 | 0.04 | 11.88 | 0.00 | 2.198 | 17.46 | 2.67 | 6.7 | 92.9 | 0.4 | -1.99 | 0.78 | 0.60 | — | 4.6 | 0.003 | 0.63 | 0.0 | 0.05 | 11.88 | 0.00 | 2.169 | 15.20 | 0.00 | 5.3 | 94.4 | 0.3 | -0.79 | 1.46 | 0.83 | 0.73 | — | 11688 | 1462 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o7F | 12746 | 2024-01-19 | 2021-04-13 | 3.15 | 3.42 | 3.19 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 14.02 | 0.00 | 1.932 | 7.93 | 0.16 | 2.5 | 97.5 | 0.0 | 0.48 | 0.70 | 0.77 | 2.29 | 3.4 | 0.004 | 0.62 | 0.0 | 0.04 | 15.75 | 0.00 | 2.124 | 9.51 | 1.85 | 2.3 | 97.7 | 0.0 | 0.35 | 0.50 | 0.69 | 0.74 | 2.11 | 11170 | 1420 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EZV | 31391 | 2024-01-17 | 2021-06-02 | 3.3 | 3.71 | — | 3.5 | 0.005 | 0.71 | 0.0 | 0.05 | 13.54 | 0.01 | 2.034 | 14.66 | 0.75 | 8.4 | 91.3 | 0.3 | -0.96 | 0.74 | 0.85 | 3.03 | 3.5 | 0.004 | 0.66 | 0.0 | 0.04 | 15.58 | 0.00 | 2.073 | 14.04 | 2.99 | 7.4 | 92.4 | 0.2 | -0.76 | 0.43 | 0.74 | 0.86 | 2.99 | 4937 | 632 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B9F | 12103 | 2024-01-19 | 2020-12-14 | 3.0 | 3.81 | — | 3.5 | 0.008 | 1.01 | 1.0 | 0.06 | 12.03 | 0.01 | 2.247 | 4.11 | 0.00 | 3.4 | 96.6 | 0.0 | -0.11 | 0.61 | 0.82 | 2.32 | 3.5 | 0.004 | 0.77 | 0.0 | 0.04 | 15.17 | 0.00 | 2.135 | 11.20 | 2.12 | 3.2 | 96.8 | 0.0 | 1.51 | 0.57 | 0.62 | 0.83 | 1.60 | 11270 | 1475 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6C70 | 7352 | 2024-01-19 | 2018-01-19 | 3.5 | 3.81 | — | 3.6 | 0.010 | 1.09 | 0.0 | 0.06 | 11.20 | 0.01 | 2.197 | 7.60 | 0.00 | 2.6 | 97.4 | 0.0 | -5.23 | 0.50 | 0.76 | 2.97 | 3.6 | 0.003 | 0.76 | 0.0 | 0.04 | 15.57 | 0.00 | 2.158 | 14.04 | 2.67 | 1.7 | 98.3 | 0.0 | 1.85 | 0.77 | 0.50 | 0.82 | 1.95 | 12368 | 1552 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CAE | 30328 | 2024-01-20 | 2020-06-08 | 3.44 | 3.81 | — | 3.7 | 0.005 | 0.88 | 2.0 | 0.05 | 14.47 | 0.00 | 1.985 | 13.72 | 0.43 | 10.1 | 89.7 | 0.2 | -5.42 | 0.73 | 0.83 | 2.26 | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 16.21 | 0.00 | 2.192 | 10.60 | 3.09 | 7.2 | 92.8 | 0.0 | -2.14 | 0.50 | 0.74 | 0.85 | 1.83 | 13365 | 1763 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XoN | 33353 | 2024-01-17 | 2022-05-01 | 3.1 | 3.66 | 2.94 | 3.3 | 0.002 | 0.47 | 0.0 | 0.04 | 12.44 | 0.00 | 2.325 | 9.45 | 0.00 | 1.5 | 98.5 | 0.0 | 2.61 | 0.57 | 0.88 | 2.21 | 3.3 | 0.004 | 0.52 | 0.0 | 0.04 | 13.80 | 0.00 | 2.294 | 9.32 | 1.24 | 1.3 | 98.7 | 0.0 | 2.64 | 0.41 | 0.59 | 0.91 | 2.40 | 3855 | 524 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S4U | 24833 | 2024-01-19 | 2021-09-09 | 3.56 | 3.78 | — | 3.6 | 0.004 | 0.74 | 0.0 | 0.04 | 19.15 | 0.00 | 2.090 | 4.36 | 0.00 | 3.3 | 96.7 | 0.0 | -1.09 | 0.78 | 0.75 | 2.48 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 19.57 | 0.00 | 2.166 | 6.18 | 0.82 | 4.9 | 95.1 | 0.0 | -0.61 | 0.49 | 0.79 | 0.76 | 2.16 | 11927 | 1092 | 4 | 142 | 0 | 0 | 0 | logfile |