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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7TCH | 25812 | 2024-01-18 | 2021-12-23 | 3.7 | 3.94 | 3.73 | 3.9 | 0.005 | 1.16 | 0.0 | 0.04 | 16.68 | 0.00 | 2.246 | 5.68 | 0.00 | 8.0 | 92.0 | 0.0 | 0.08 | 0.71 | 0.84 | 1.54 | 3.9 | 0.002 | 0.65 | 0.0 | 0.04 | 17.11 | 0.00 | 2.226 | 5.79 | 1.53 | 6.9 | 93.1 | 0.0 | 0.26 | 0.37 | 0.69 | 0.83 | 1.11 | 9043 | 1135 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 7YEG | 33772 | 2024-01-17 | 2022-07-05 | 3.73 | 3.29 | 3.71 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 13.19 | 0.00 | 2.191 | 5.16 | 0.37 | 3.1 | 96.8 | 0.0 | -4.62 | 0.61 | 0.57 | 0.60 | 3.5 | 0.004 | 0.70 | 0.0 | 0.04 | 15.52 | 0.00 | 2.118 | 11.70 | 2.16 | 5.5 | 94.5 | 0.0 | -1.67 | 3.05 | 0.59 | 0.55 | 1.08 | 49974 | 6306 | 24 | 0 | 51 | 0 | 0 | logfile |
✔ | 7BTF | 30178 | 2024-01-18 | 2020-04-01 | 2.95 | 3.30 | 3.02 | 3.2 | 0.009 | 0.73 | 0.0 | 0.05 | 12.87 | 0.00 | 2.262 | 6.36 | 0.00 | 7.0 | 93.0 | 0.0 | -2.91 | 0.77 | 0.89 | 4.15 | 3.2 | 0.004 | 0.58 | 0.0 | 0.04 | 15.15 | 0.00 | 2.210 | 5.11 | 2.42 | 4.7 | 95.3 | 0.0 | -0.34 | 0.92 | 0.78 | 0.90 | 3.55 | 9685 | 1213 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7AiP | 11801 | 2024-01-20 | 2020-09-28 | 3.12 | 3.59 | 3.18 | 3.5 | 0.007 | 0.83 | 0.0 | 0.05 | 17.39 | 0.00 | 2.215 | 7.27 | 0.71 | 3.5 | 96.5 | 0.0 | -1.49 | 0.69 | 0.84 | 1.94 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 16.48 | 0.00 | 2.146 | 4.62 | 2.69 | 3.1 | 96.9 | 0.0 | 1.46 | 0.41 | 0.66 | 0.85 | 1.63 | 13535 | 1734 | 10 | 0 | 14 | 4 | 0 | logfile |
✔ | 8F7R | 28908 | 2024-01-19 | 2022-11-20 | 3.28 | 2.92 | 3.26 | 3.4 | 0.014 | 0.84 | 0.0 | 0.07 | 8.21 | 0.01 | 2.260 | 4.20 | 0.00 | 1.5 | 98.5 | 0.0 | -0.71 | 0.54 | 0.70 | 1.83 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 13.26 | 0.00 | 2.003 | 12.85 | 2.93 | 2.9 | 97.1 | 0.0 | 1.00 | 1.16 | 0.58 | 0.80 | 2.59 | 11697 | 1443 | 11 | 0 | 12 | 0 | 0 | logfile |
✔ | 7YoV | 33988 | 2024-01-20 | 2022-08-02 | 3.25 | 3.39 | 3.20 | 3.3 | 0.011 | 1.17 | 0.0 | 0.06 | 11.20 | 0.01 | 2.102 | 6.46 | 1.14 | 7.6 | 92.4 | 0.0 | -3.95 | 0.72 | 0.76 | 2.51 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 15.26 | 0.00 | 2.099 | 10.59 | 2.41 | 4.2 | 95.8 | 0.0 | 0.02 | 1.27 | 0.74 | 0.79 | 1.57 | 13232 | 1683 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7L1V | 23119 | 2024-01-18 | 2020-12-15 | 3.0 | 3.37 | — | 3.3 | 0.007 | 0.91 | 0.0 | 0.06 | 12.82 | 0.01 | 2.306 | 3.23 | 0.30 | 2.8 | 97.2 | 0.0 | -2.91 | 0.71 | 0.86 | 4.16 | 3.3 | 0.004 | 0.58 | 0.0 | 0.04 | 15.43 | 0.00 | 2.208 | 6.47 | 2.73 | 2.5 | 97.5 | 0.0 | 0.27 | 0.92 | 0.74 | 0.89 | 3.26 | 9606 | 1253 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8E2A | 27830 | 2024-01-17 | 2022-08-14 | 2.8 | 3.28 | 2.87 | 3.2 | 0.004 | 0.71 | 0.0 | 0.05 | 13.88 | 0.00 | 2.173 | 6.65 | 0.00 | 2.4 | 97.6 | 0.0 | -0.21 | 0.67 | 0.79 | 4.70 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.17 | 0.00 | 2.199 | 4.90 | 1.16 | 2.4 | 97.6 | 0.0 | 0.58 | 0.39 | 0.65 | 0.79 | 4.04 | 5768 | 686 | 2 | 15 | 0 | 0 | 0 | logfile |
✔ | 7XU2 | 33456 | 2024-01-17 | 2022-05-18 | 3.2 | 3.33 | 3.13 | 3.2 | 0.012 | 0.95 | 2.0 | 0.08 | 14.46 | 0.00 | 2.096 | 2.07 | 0.86 | 5.5 | 94.5 | 0.0 | -1.37 | 0.84 | 0.82 | 3.25 | 3.2 | 0.003 | 0.54 | 2.0 | 0.06 | 14.01 | 0.00 | 2.029 | 4.89 | 0.66 | 4.5 | 95.5 | 0.0 | -0.52 | 0.33 | 0.85 | 0.85 | 3.34 | 52218 | 3321 | 18 | 0 | 66 | 0 | 25248 | logfile |
✔ | 7oJ8 | 12939 | 2024-01-18 | 2021-05-14 | 3.4 | 3.92 | 3.48 | 3.8 | 0.010 | 1.14 | 0.0 | 0.06 | 13.09 | 0.00 | 2.114 | 6.59 | 0.41 | 5.3 | 94.2 | 0.5 | -1.11 | 0.63 | 0.79 | 1.90 | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 15.01 | 0.00 | 2.156 | 10.32 | 3.46 | 4.6 | 95.4 | 0.0 | 0.87 | 2.83 | 0.63 | 0.82 | 1.45 | 9148 | 1150 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 7SK8 | 25176 | 2024-01-20 | 2021-10-19 | 3.3 | 3.55 | — | 3.5 | 0.007 | 0.73 | 0.0 | 0.06 | 15.20 | 0.00 | 2.265 | 2.62 | 0.00 | 5.2 | 94.8 | 0.0 | -0.08 | 0.70 | 0.83 | 3.30 | 3.5 | 0.004 | 0.50 | 0.0 | 0.04 | 14.04 | 0.00 | 2.040 | 4.44 | 0.68 | 5.5 | 94.5 | 0.0 | 0.17 | 0.28 | 0.69 | 0.83 | 3.40 | 13389 | 835 | 7 | 0 | 8 | 0 | 6513 | logfile |
✔ | 8A1D | 15072 | 2024-01-20 | 2022-06-01 | 3.0 | 3.06 | 2.96 | 3.1 | 0.008 | 0.74 | 0.0 | 0.05 | 14.73 | 0.00 | 1.988 | 10.18 | 0.97 | 3.9 | 96.0 | 0.2 | -0.24 | 0.61 | 0.69 | 3.77 | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 12.89 | 0.00 | 2.001 | 8.50 | 2.48 | 3.3 | 96.5 | 0.2 | -0.55 | 0.53 | 0.77 | 0.82 | 3.54 | 67152 | 8528 | 32 | 0 | 32 | 0 | 0 | logfile |
✔ | 8GU6 | 34270 | 2024-01-20 | 2022-09-10 | 3.1 | 3.33 | 3.14 | 3.4 | 0.002 | 0.53 | 0.0 | 0.04 | 18.37 | 0.00 | 2.091 | 13.08 | 0.14 | 5.6 | 94.4 | 0.0 | -0.34 | 0.70 | 0.79 | 2.37 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 18.43 | 0.00 | 2.126 | 12.91 | 4.12 | 6.6 | 93.4 | 0.0 | -0.21 | 0.27 | 0.70 | 0.79 | 2.30 | 15261 | 1870 | 5 | 50 | 4 | 0 | 0 | logfile |
✔ | 7BZF | 30252 | 2024-01-19 | 2020-04-27 | 3.26 | 3.61 | 3.32 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 14.83 | 0.00 | 2.199 | 11.67 | 0.00 | 8.5 | 91.5 | 0.0 | -4.42 | 0.73 | 0.77 | 2.58 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 16.49 | 0.00 | 2.105 | 11.77 | 1.14 | 6.7 | 93.3 | 0.0 | -1.24 | 0.49 | 0.70 | 0.78 | 1.91 | 9932 | 1200 | 7 | 19 | 2 | 0 | 0 | logfile |
✔ | 7XTZ | 33453 | 2024-01-17 | 2022-05-18 | 2.8 | 2.99 | 2.73 | 2.9 | 0.012 | 0.90 | 0.0 | 0.05 | 13.65 | 0.00 | 2.204 | 0.77 | 0.42 | 3.2 | 96.8 | 0.0 | -0.29 | 0.83 | 0.84 | 4.09 | 2.9 | 0.002 | 0.48 | 0.0 | 0.04 | 13.39 | 0.00 | 2.056 | 3.15 | 0.56 | 2.9 | 97.1 | 0.0 | -0.05 | 0.30 | 0.83 | 0.86 | 3.77 | 51900 | 3291 | 21 | 0 | 75 | 0 | 25032 | logfile |
✔ | 7QFQ | 13947 | 2024-01-19 | 2021-12-06 | 3.6 | 3.83 | 3.58 | 4.0 | 0.002 | 0.54 | 0.0 | 0.04 | 12.93 | 0.00 | 2.177 | 8.31 | 0.00 | 5.4 | 94.6 | 0.0 | -0.70 | 0.65 | 0.70 | 1.50 | 4.0 | 0.002 | 0.50 | 0.0 | 0.04 | 14.91 | 0.00 | 2.191 | 7.22 | 2.02 | 5.0 | 95.0 | 0.0 | -0.54 | 0.36 | 0.66 | 0.71 | 1.58 | 10659 | 1291 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AiR | 11803 | 2024-01-20 | 2020-09-28 | 3.66 | 4.42 | 3.80 | 4.2 | 0.008 | 0.97 | 0.0 | 0.05 | 17.15 | 0.01 | 2.231 | 8.37 | 1.14 | 3.3 | 96.7 | 0.0 | -1.31 | 0.67 | 0.74 | 1.21 | 4.2 | 0.003 | 0.69 | 0.0 | 0.04 | 16.45 | 0.00 | 2.235 | 7.78 | 2.93 | 3.5 | 96.5 | 0.0 | 1.22 | 0.77 | 0.65 | 0.81 | 1.19 | 13504 | 1751 | 7 | 0 | 11 | 0 | 0 | logfile |
✔ | 7SK9 | 25177 | 2024-01-19 | 2021-10-19 | 3.7 | 4.01 | — | 3.9 | 0.005 | 0.62 | 0.0 | 0.05 | 15.65 | 0.00 | 2.028 | 4.76 | 0.00 | 4.4 | 95.6 | 0.0 | 1.15 | 0.71 | 0.81 | 1.92 | 3.9 | 0.003 | 0.48 | 0.0 | 0.04 | 14.22 | 0.00 | 2.040 | 5.56 | 0.94 | 4.4 | 95.6 | 0.0 | 1.48 | 0.40 | 0.70 | 0.81 | 2.01 | 11261 | 716 | 4 | 0 | 3 | 0 | 5561 | logfile |
✔ | 7N58 | 24182 | 2024-01-18 | 2021-06-05 | 3.4 | 3.79 | 3.58 | 3.8 | 0.004 | 0.84 | 0.0 | 0.05 | 13.09 | 0.01 | 2.146 | 14.80 | 0.00 | 2.8 | 97.2 | 0.0 | -0.83 | 0.61 | 0.67 | 1.16 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 16.08 | 0.00 | 2.197 | 9.58 | 1.59 | 3.8 | 96.2 | 0.0 | 1.02 | 0.54 | 0.64 | 0.71 | 0.97 | 9326 | 1200 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B9K | 12104 | 2024-01-18 | 2020-12-14 | 3.16 | 3.23 | 3.17 | 3.3 | 0.005 | 0.66 | 0.0 | 0.05 | 14.96 | 0.01 | 2.168 | 13.51 | 1.11 | 5.0 | 95.0 | 0.0 | -3.10 | 0.73 | 0.83 | 3.07 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 14.73 | 0.00 | 2.210 | 10.86 | 1.37 | 3.7 | 96.3 | 0.0 | -0.35 | 0.42 | 0.74 | 0.85 | 2.52 | 59136 | 7680 | 24 | 0 | 0 | 0 | 0 | logfile |