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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CPU | 16786 | 2023-12-16 | 2023-03-03 | 1.76 | 1.54 | 1.80 | 1.6 | 0.004 | 0.71 | 0.0 | 0.05 | 14.91 | 0.01 | 1.976 | 4.95 | 0.00 | 1.0 | 99.0 | 0.0 | 2.29 | 0.71 | 0.77 | 8.55 | 1.6 | 0.004 | 0.62 | 0.0 | 0.04 | 15.65 | 0.00 | 2.051 | 5.31 | 0.57 | 1.8 | 98.2 | 0.0 | 3.90 | 0.29 | 0.73 | 0.80 | 8.29 | 35823 | 4152 | 72 | 0 | 38 | 1705 | 0 | logfile |
✔ | 7M4W | 23668 | 2023-12-14 | 2021-03-22 | 2.55 | 1.74 | — | 1.6 | 0.006 | 0.55 | 0.0 | 0.03 | 22.06 | 0.01 | 1.760 | 3.08 | 0.02 | 2.8 | 97.0 | 0.2 | 1.38 | 0.77 | 0.74 | 3.81 | 1.6 | 0.005 | 0.75 | 0.0 | 0.04 | 22.25 | 0.01 | 1.693 | 4.96 | 2.23 | 3.1 | 96.8 | 0.1 | 0.49 | 0.90 | 0.80 | 0.77 | 3.64 | 137923 | 5518 | 76 | 4373 | 195 | 797 | 0 | logfile |
✔ | 7SEP | 25074 | 2023-12-08 | 2021-10-01 | 3.8 | 2.53 | 3.76 | 1.6 | 0.006 | 0.66 | 0.0 | 0.05 | 12.76 | 0.01 | 2.155 | 10.23 | 8.22 | 5.0 | 95.0 | 0.0 | -0.19 | 0.72 | 0.72 | 2.36 | 2.0 | 0.004 | 0.75 | 0.0 | 0.05 | 17.02 | 0.01 | 2.160 | 15.37 | 0.72 | 3.5 | 96.5 | 0.0 | -0.44 | 0.96 | 0.72 | 0.71 | 2.13 | 7641 | 930 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M4U | 23666 | 2023-12-07 | 2021-03-22 | 2.71 | 1.78 | — | 1.6 | 0.006 | 0.58 | 2.0 | 0.04 | 21.77 | 0.02 | 1.771 | 4.42 | 0.20 | 3.1 | 96.7 | 0.2 | 1.08 | 0.79 | 0.76 | 3.70 | 1.6 | 0.003 | 0.69 | 0.0 | 0.04 | 21.97 | 0.01 | 1.791 | 5.90 | 2.00 | 3.2 | 96.5 | 0.2 | 0.89 | 0.91 | 0.82 | 0.81 | 3.51 | 51764 | 2386 | 27 | 1528 | 84 | 191 | 0 | logfile |
✔ | 8CPX | 16789 | 2023-12-16 | 2023-03-03 | 1.76 | 1.61 | 1.78 | 1.6 | 0.005 | 0.80 | 0.0 | 0.06 | 14.97 | 0.01 | 2.063 | 5.37 | 0.00 | 1.0 | 99.0 | 0.0 | 2.18 | 0.75 | 0.81 | 8.02 | 1.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.88 | 0.00 | 2.212 | 2.81 | 1.31 | 1.8 | 98.2 | 0.0 | 4.58 | 0.39 | 0.78 | 0.85 | 7.90 | 35827 | 4152 | 72 | 0 | 38 | 1709 | 0 | logfile |
✔ | 7M4Z | 23671 | 2023-12-14 | 2021-03-22 | 2.92 | 1.87 | — | 1.6 | 0.005 | 0.54 | 0.0 | 0.03 | 22.10 | 0.02 | 1.833 | 4.61 | 0.00 | 3.0 | 96.9 | 0.2 | 1.09 | 0.77 | 0.72 | 2.81 | 2.5 | 0.004 | 0.67 | 0.0 | 0.04 | 22.18 | 0.01 | 1.722 | 6.62 | 2.36 | 3.5 | 96.3 | 0.1 | 0.45 | 0.36 | 0.79 | 0.76 | 2.71 | 138172 | 5625 | 70 | 4373 | 190 | 229 | 0 | logfile |
✔ | 7SiM | 25144 | 2023-12-10 | 2021-10-14 | 2.7 | 2.00 | — | 1.6 | 0.005 | 0.71 | 0.0 | 0.05 | 13.38 | 0.00 | 2.302 | 7.90 | 0.07 | 1.7 | 98.3 | 0.0 | 0.36 | 0.74 | 0.72 | 3.19 | 1.6 | 0.003 | 0.52 | 0.0 | 0.04 | 14.99 | 0.00 | 2.212 | 8.22 | 0.88 | 1.7 | 98.3 | 0.0 | 0.70 | 0.93 | 0.75 | 0.76 | 2.95 | 12826 | 1564 | 8 | 0 | 28 | 0 | 0 | logfile |
✔ | 8BPA | 16147 | 2023-12-09 | 2022-11-16 | 3.7 | 2.50 | 3.80 | 1.6 | 0.005 | 0.85 | 0.0 | 0.05 | 18.50 | 0.01 | 2.127 | 18.60 | 0.97 | 4.0 | 96.0 | 0.0 | 0.00 | 0.69 | 0.65 | 0.97 | 1.6 | 0.003 | 0.80 | 0.0 | 0.04 | 18.78 | 0.01 | 2.140 | 16.42 | 0.53 | 4.4 | 95.6 | 0.0 | 0.14 | 1.61 | 0.69 | 0.66 | 1.15 | 10393 | 1280 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 8CS9 | 26960 | 2023-12-09 | 2022-05-12 | 2.74 | 1.95 | — | 1.6 | 0.006 | 0.85 | 0.0 | 0.05 | 18.63 | 0.01 | 2.218 | 10.20 | 3.66 | 2.2 | 97.5 | 0.3 | 0.33 | 0.82 | 0.81 | 3.50 | 1.6 | 0.003 | 0.66 | 0.0 | 0.04 | 17.59 | 0.00 | 2.142 | 8.18 | 2.81 | 1.8 | 98.2 | 0.0 | 1.60 | 0.38 | 0.83 | 0.83 | 3.41 | 60944 | 7677 | 39 | 0 | 27 | 268 | 0 | logfile |
✔ | 8CPM | 16783 | 2023-12-16 | 2023-03-03 | 1.81 | 1.57 | 1.84 | 1.6 | 0.005 | 0.85 | 0.0 | 0.05 | 15.21 | 0.01 | 1.916 | 7.77 | 0.00 | 1.0 | 99.0 | 0.0 | 2.32 | 0.70 | 0.75 | 7.56 | 1.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.38 | 0.00 | 2.043 | 7.22 | 0.11 | 2.3 | 97.7 | 0.0 | 4.30 | 0.37 | 0.71 | 0.77 | 7.46 | 36090 | 4152 | 72 | 0 | 38 | 1972 | 0 | logfile |
✔ | 8EMQ | 28259 | 2023-12-12 | 2022-09-28 | 1.66 | 1.59 | 1.68 | 1.6 | 0.011 | 1.31 | 0.0 | 0.07 | 15.25 | 0.01 | 0.733 | 5.98 | 1.91 | 0.6 | 99.4 | 0.0 | 2.37 | 0.66 | 0.78 | 9.05 | 1.6 | 0.003 | 0.60 | 0.0 | 0.04 | 14.53 | 0.00 | 2.078 | 3.66 | 0.64 | 1.2 | 98.8 | 0.0 | 5.31 | 2.13 | 0.81 | 0.89 | 8.89 | 37805 | 4128 | 72 | 0 | 30 | 2975 | 0 | logfile |
✔ | 8T4S | 41039 | 2023-12-13 | 2023-06-09 | 2.6 | 2.55 | — | 1.7 | 0.005 | 0.70 | 0.0 | 0.05 | 23.29 | 0.01 | 1.654 | 12.19 | 3.03 | 4.5 | 95.1 | 0.4 | -0.03 | 0.89 | 0.87 | 3.39 | 1.6 | 0.007 | 0.70 | 0.0 | 0.04 | 22.86 | 0.01 | 1.815 | 9.31 | 3.46 | 4.6 | 95.1 | 0.3 | 0.10 | 0.29 | 0.89 | 0.87 | 3.35 | 74894 | 4895 | 42 | 1671 | 100 | 4 | 0 | logfile |
✔ | 8D33 | 27154 | 2023-12-10 | 2022-05-31 | 2.46 | 2.01 | 2.48 | 1.7 | 0.003 | 0.55 | 0.0 | 0.04 | 13.19 | 0.00 | 2.091 | 4.01 | 0.39 | 3.5 | 96.5 | 0.1 | 0.90 | 0.73 | 0.78 | 3.10 | 1.7 | 0.003 | 0.61 | 0.0 | 0.04 | 18.09 | 0.00 | 2.164 | 7.25 | 2.78 | 3.0 | 96.9 | 0.1 | 0.72 | 1.33 | 0.73 | 0.79 | 2.91 | 15272 | 1784 | 6 | 46 | 2 | 0 | 0 | logfile |
✔ | 8CAM | 16530 | 2023-12-14 | 2023-01-24 | 1.86 | 1.57 | 1.83 | 1.7 | 0.010 | 1.53 | 0.0 | 0.11 | 21.86 | 0.03 | 1.821 | 0.54 | 0.27 | 3.0 | 96.8 | 0.1 | -1.28 | 0.64 | 0.76 | 6.57 | 1.6 | 0.006 | 0.97 | 0.0 | 0.05 | 22.27 | 0.01 | 1.747 | 7.43 | 1.24 | 2.5 | 97.5 | 0.0 | -0.04 | 0.34 | 0.73 | 0.82 | 6.46 | 86648 | 2767 | 65 | 2724 | 322 | 6113 | 0 | logfile |
✔ | 6W6P | 21562 | 2023-12-12 | 2020-03-17 | 2.9 | 2.21 | — | 1.7 | 0.010 | 1.07 | 0.0 | 0.06 | 22.66 | 0.01 | 1.989 | 6.48 | 16.52 | 12.1 | 87.6 | 0.3 | -4.00 | 0.77 | 0.84 | 2.96 | 1.6 | 0.005 | 0.77 | 0.0 | 0.04 | 22.31 | 0.01 | 1.947 | 5.83 | 8.41 | 9.3 | 90.7 | 0.1 | -1.98 | 1.59 | 0.79 | 0.86 | 2.57 | 133554 | 5058 | 51 | 4378 | 4 | 0 | 0 | logfile |
✔ | 7S3H | 24823 | 2023-12-09 | 2021-09-06 | 2.5 | 2.10 | 2.54 | 1.7 | 0.009 | 1.08 | 0.0 | 0.05 | 18.19 | 0.01 | 2.234 | 3.77 | 0.11 | 3.7 | 96.3 | 0.0 | -1.50 | 0.75 | 0.71 | 1.79 | 1.7 | 0.004 | 0.71 | 0.0 | 0.04 | 19.96 | 0.00 | 2.093 | 13.47 | 1.85 | 3.8 | 96.2 | 0.0 | -0.38 | 0.75 | 0.79 | 0.77 | 2.27 | 9966 | 1030 | 4 | 75 | 1 | 0 | 0 | logfile |
✔ | 8FHK | 29087 | 2023-12-12 | 2022-12-14 | 2.9 | 2.20 | — | 1.7 | 0.008 | 1.17 | 1.0 | 0.06 | 18.88 | 0.02 | 2.200 | 7.55 | 0.39 | 7.0 | 93.0 | 0.0 | -1.60 | 0.73 | 0.68 | 1.79 | 1.7 | 0.003 | 0.61 | 0.0 | 0.04 | 17.76 | 0.00 | 1.825 | 11.32 | 1.45 | 7.3 | 92.6 | 0.1 | -0.64 | 1.29 | 0.75 | 0.73 | 1.87 | 19947 | 1219 | 4 | 0 | 20 | 0 | 9827 | logfile |
✔ | 8HK6 | 34847 | 2023-12-14 | 2022-11-25 | 2.64 | 2.08 | 2.77 | 1.7 | 0.006 | 0.80 | 0.0 | 0.05 | 16.47 | 0.01 | 1.477 | 13.25 | 1.62 | 2.8 | 97.0 | 0.2 | -0.80 | 0.79 | 0.82 | 3.37 | 1.7 | 0.004 | 0.65 | 0.0 | 0.04 | 17.28 | 0.00 | 2.190 | 9.58 | 2.54 | 2.9 | 96.9 | 0.2 | 0.74 | 0.46 | 0.79 | 0.83 | 3.14 | 28704 | 3596 | 8 | 0 | 24 | 0 | 0 | logfile |
✔ | 7oUG | 13076 | 2023-12-10 | 2021-06-11 | 3.1 | 2.33 | 3.12 | 1.7 | 0.004 | 0.74 | 0.0 | 0.04 | 17.65 | 0.01 | 1.769 | 5.66 | 0.14 | 2.4 | 97.6 | 0.0 | 0.28 | 0.78 | 0.75 | 2.41 | 1.6 | 0.003 | 0.68 | 0.0 | 0.04 | 19.50 | 0.00 | 1.931 | 9.72 | 0.76 | 2.2 | 97.8 | 0.0 | 0.00 | 0.62 | 0.78 | 0.79 | 2.30 | 15090 | 1664 | 16 | 80 | 10 | 8 | 0 | logfile |
✔ | 8CEU | 16613 | 2023-12-15 | 2023-02-02 | 1.83 | 1.74 | 1.82 | 1.7 | 0.009 | 1.57 | 16.0 | 0.11 | 21.73 | 0.03 | 1.830 | 0.53 | 0.65 | 2.7 | 97.2 | 0.0 | -1.11 | 0.79 | 0.85 | 6.99 | 1.7 | 0.005 | 0.93 | 16.0 | 0.05 | 22.12 | 0.01 | 1.797 | 4.66 | 0.37 | 2.0 | 98.0 | 0.0 | -0.28 | 0.77 | 0.84 | 0.89 | 6.84 | 92838 | 3076 | 79 | 2872 | 304 | 6830 | 0 | logfile |