The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8KD6 | 37126 | 2023-12-14 | 2023-08-09 | 3.07 | 3.13 | 3.02 | 2.8 | 0.004 | 0.87 | 2.0 | 0.05 | 24.63 | 0.01 | 1.891 | 8.05 | 0.77 | 4.5 | 95.5 | 0.0 | -1.98 | 0.76 | 0.71 | 1.01 | 3.0 | 0.003 | 0.64 | 0.0 | 0.04 | 24.69 | 0.00 | 1.796 | 15.19 | 0.36 | 4.8 | 95.2 | 0.0 | -0.24 | 1.04 | 0.83 | 0.85 | 1.82 | 26982 | 2489 | 17 | 328 | 1 | 0 | 0 | logfile |
✔ | 8KD2 | 37122 | 2023-12-13 | 2023-08-09 | 3.02 | 3.13 | 2.97 | 3.0 | 0.004 | 0.70 | 0.0 | 0.04 | 25.70 | 0.01 | 1.457 | 8.15 | 0.68 | 4.3 | 95.7 | 0.0 | -0.56 | 0.78 | 0.74 | 1.28 | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 25.17 | 0.00 | 2.134 | 13.92 | 0.26 | 4.1 | 95.9 | 0.0 | 0.38 | 1.22 | 0.83 | 0.83 | 2.11 | 24694 | 2164 | 16 | 348 | 0 | 0 | 0 | logfile |
✔ | 8KD3 | 37123 | 2023-12-14 | 2023-08-09 | 2.9 | 2.96 | 2.85 | 3.0 | 0.004 | 0.77 | 1.0 | 0.04 | 24.41 | 0.01 | 1.281 | 7.68 | 0.13 | 5.1 | 94.9 | 0.0 | -1.28 | 0.74 | 0.66 | 1.31 | 3.0 | 0.003 | 0.62 | 0.0 | 0.04 | 24.58 | 0.00 | 2.010 | 13.75 | 2.59 | 4.7 | 95.3 | 0.0 | -0.22 | 0.71 | 0.82 | 0.86 | 2.49 | 27576 | 2563 | 17 | 328 | 1 | 0 | 0 | logfile |
✔ | 8KH4 | 37236 | 2023-12-08 | 2023-08-21 | 3.1 | 3.38 | 3.16 | 3.4 | 0.009 | 1.01 | 9.0 | 0.08 | 14.02 | 0.01 | 2.049 | 16.56 | 0.40 | 2.8 | 97.2 | 0.0 | 0.62 | 0.59 | 0.72 | 2.53 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 15.27 | 0.00 | 2.117 | 12.60 | 0.40 | 1.9 | 98.1 | 0.0 | 0.91 | 1.58 | 0.59 | 0.74 | 1.80 | 7521 | 1001 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8iVA | 35755 | 2023-12-07 | 2023-03-26 | 3.95 | 4.14 | 4.54 | 4.1 | 0.006 | 0.97 | 0.0 | 0.07 | 13.80 | 0.01 | 2.302 | 5.49 | 0.54 | 7.4 | 92.6 | 0.0 | -4.03 | 0.61 | 0.70 | 2.37 | 4.1 | 0.003 | 0.78 | 0.0 | 0.04 | 16.77 | 0.00 | 2.177 | 12.82 | 0.54 | 6.7 | 93.3 | 0.0 | -2.27 | 1.30 | 0.72 | 0.83 | 1.82 | 5029 | 648 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8SYP | 40889 | 2023-12-10 | 2023-05-25 | 2.6 | 3.28 | 2.65 | 3.1 | 0.006 | 0.98 | 0.0 | 0.05 | 27.37 | 0.01 | 2.273 | 4.40 | 0.59 | 3.1 | 96.9 | 0.0 | -0.62 | 0.85 | 0.88 | 2.66 | 3.1 | 0.004 | 0.60 | 0.0 | 0.04 | 27.44 | 0.00 | 2.096 | 8.28 | 1.67 | 3.3 | 96.7 | 0.0 | 1.68 | 0.38 | 0.83 | 0.86 | 2.86 | 15472 | 1199 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 8BWP | 16293 | 2023-12-09 | 2022-12-07 | 3.6 | 3.85 | 3.55 | 3.8 | 0.011 | 0.90 | 1.0 | 0.06 | 12.54 | 0.01 | 2.213 | 4.13 | 0.48 | 2.9 | 97.1 | 0.0 | -1.51 | 0.68 | 0.83 | 2.86 | 3.8 | 0.003 | 0.60 | 1.0 | 0.04 | 15.33 | 0.00 | 2.111 | 9.28 | 0.29 | 2.1 | 97.9 | 0.0 | 0.44 | 1.11 | 0.69 | 0.79 | 1.52 | 9578 | 1195 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8Q96 | 18269 | 2023-12-07 | 2023-08-19 | 3.09 | 3.01 | 2.64 | 3.2 | 0.009 | 1.24 | 0.0 | 0.07 | 10.14 | 0.01 | 2.529 | 1.50 | 0.00 | 5.6 | 94.4 | 0.0 | -3.54 | 0.47 | 0.86 | 5.83 | 3.1 | 0.007 | 0.76 | 0.0 | 0.05 | 15.47 | 0.00 | 2.104 | 4.48 | 1.00 | 6.5 | 93.5 | 0.0 | -3.53 | 1.65 | 0.45 | 0.85 | 4.63 | 2100 | 224 | 12 | 0 | 88 | 0 | 0 | logfile |
✔ | 8P51 | 17436 | 2023-12-09 | 2023-05-23 | 3.55 | 4.39 | 3.63 | 4.0 | 0.006 | 0.83 | 0.0 | 0.05 | 13.50 | 0.01 | 2.113 | 4.21 | 0.00 | 4.4 | 95.6 | 0.0 | -1.93 | 0.82 | 0.71 | 2.07 | 4.0 | 0.004 | 0.71 | 0.0 | 0.04 | 14.89 | 0.00 | 2.175 | 8.83 | 0.08 | 3.6 | 96.4 | 0.1 | 1.12 | 1.71 | 0.88 | 0.85 | 1.67 | 12389 | 1574 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SPo | 40680 | 2023-12-15 | 2023-05-03 | 2.98 | 2.34 | 3.17 | 2.1 | 0.004 | 0.60 | 0.0 | 0.26 | 18.57 | 0.00 | 0.334 | 11.05 | 0.00 | 6.0 | 94.0 | 0.0 | -1.15 | 0.46 | 0.30 | 0.19 | 1.6 | 0.003 | 0.72 | 0.0 | 0.04 | 18.63 | 0.00 | 1.820 | 12.08 | 1.50 | 5.8 | 94.2 | 0.0 | -1.35 | 2.06 | 0.57 | 0.48 | 1.11 | 31307 | 3428 | 22 | 154 | 6 | 0 | 0 | logfile |
✔ | 8PC5 | 17594 | 2023-12-10 | 2023-06-09 | 3.02 | 3.37 | 3.06 | 3.0 | 0.006 | 0.79 | 0.0 | 0.06 | 29.26 | 0.01 | 2.205 | 7.09 | 0.42 | 1.9 | 98.1 | 0.0 | 1.05 | 0.90 | 0.86 | 3.01 | 3.0 | 0.004 | 0.57 | 0.0 | 0.03 | 27.64 | 0.00 | 2.226 | 6.66 | 0.70 | 1.9 | 98.1 | 0.0 | 1.64 | 1.94 | 0.93 | 0.91 | 2.69 | 12836 | 853 | 11 | 294 | 0 | 0 | 0 | logfile |
✔ | 8G2V | 29682 | 2023-12-07 | 2023-02-06 | 2.715 | 2.36 | 2.41 | 3.0 | 0.005 | 0.64 | 0.0 | 0.06 | 16.26 | 0.00 | 2.486 | 8.31 | 0.00 | 5.3 | 94.7 | 0.0 | -3.75 | 0.45 | 0.81 | 7.19 | 2.8 | 0.003 | 0.68 | 0.0 | 0.06 | 17.30 | 0.00 | 2.330 | 18.40 | 1.67 | 2.6 | 97.4 | 0.0 | -3.25 | 2.56 | 0.43 | 0.83 | 7.86 | 1660 | 210 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PC6 | 17595 | 2023-12-10 | 2023-06-09 | 3.04 | 3.48 | 3.06 | 3.1 | 0.004 | 0.68 | 0.0 | 0.04 | 28.54 | 0.01 | 2.142 | 7.87 | 0.13 | 2.2 | 97.8 | 0.0 | 0.83 | 0.89 | 0.83 | 2.36 | 3.1 | 0.004 | 0.57 | 0.0 | 0.03 | 27.15 | 0.00 | 2.153 | 9.29 | 0.00 | 2.7 | 97.3 | 0.0 | 1.47 | 1.32 | 0.93 | 0.91 | 2.86 | 13493 | 939 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 8HQM | 34950 | 2023-12-08 | 2022-12-13 | 2.95 | 4.20 | 3.00 | 3.1 | 0.005 | 0.90 | 0.0 | 0.05 | 16.06 | 0.01 | 2.241 | 10.27 | 0.43 | 5.0 | 95.0 | 0.0 | -1.84 | 0.81 | 0.84 | 3.87 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 16.62 | 0.00 | 2.143 | 13.72 | 2.04 | 4.1 | 95.9 | 0.0 | -0.53 | 0.26 | 0.87 | 0.92 | 3.56 | 8618 | 1104 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8J7U | 36049 | 2023-12-09 | 2023-04-28 | 3.12 | 3.20 | 3.07 | 3.1 | 0.004 | 0.83 | 0.0 | 0.05 | 15.33 | 0.01 | 1.982 | 8.65 | 1.88 | 3.7 | 96.3 | 0.0 | 0.27 | 0.60 | 0.75 | 2.50 | 3.1 | 0.006 | 0.75 | 0.0 | 0.05 | 15.56 | 0.01 | 2.043 | 14.05 | 0.82 | 4.1 | 95.9 | 0.0 | 0.60 | 0.58 | 0.65 | 0.67 | 2.27 | 11003 | 1423 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 8FEX | 29033 | 2023-12-08 | 2022-12-06 | 3.07 | 3.30 | 3.12 | 3.4 | 0.003 | 0.46 | 0.0 | 0.04 | 13.44 | 0.00 | 1.911 | 7.41 | 0.00 | 5.8 | 94.2 | 0.0 | -0.93 | 0.60 | 0.73 | 2.45 | 3.4 | 0.003 | 0.53 | 0.0 | 0.04 | 15.76 | 0.00 | 2.158 | 8.30 | 0.63 | 6.3 | 93.6 | 0.1 | -0.46 | 0.34 | 0.56 | 0.72 | 1.98 | 7302 | 891 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JHF | 36264 | 2023-12-11 | 2023-05-23 | 3.68 | 3.48 | 3.63 | 3.5 | 0.004 | 0.61 | 0.0 | 0.03 | 27.23 | 0.00 | 2.111 | 8.03 | 0.70 | 4.8 | 95.2 | 0.0 | 0.59 | 0.80 | 0.82 | 1.35 | 3.5 | 0.004 | 0.59 | 0.0 | 0.03 | 27.62 | 0.00 | 2.105 | 8.41 | 0.00 | 5.4 | 94.5 | 0.1 | 0.86 | 0.99 | 0.80 | 0.82 | 1.10 | 14703 | 1029 | 12 | 320 | 2 | 0 | 0 | logfile |
✔ | 8oX0 | 17251 | 2023-12-09 | 2023-04-28 | 2.52 | 2.85 | 2.85 | 2.9 | 0.007 | 0.88 | 0.0 | 0.06 | 27.18 | 0.01 | 2.156 | 2.71 | 0.00 | 1.0 | 99.0 | 0.0 | 1.78 | 0.77 | 0.79 | 4.78 | 2.9 | 0.004 | 0.57 | 0.0 | 0.03 | 28.10 | 0.00 | 2.124 | 5.20 | 1.07 | 1.8 | 98.2 | 0.0 | 2.86 | 0.31 | 0.84 | 0.89 | 3.71 | 12271 | 787 | 20 | 290 | 0 | 57 | 0 | logfile |
✔ | 8AFH | 15398 | 2023-12-10 | 2022-07-18 | 3.9 | 2.50 | 3.75 | 3.1 | 0.006 | 0.70 | 0.0 | 0.04 | 14.17 | 0.00 | 2.160 | 15.04 | 0.00 | 4.9 | 95.1 | 0.0 | -1.29 | 0.61 | 0.62 | 1.09 | 2.1 | 0.004 | 0.66 | 0.0 | 0.04 | 17.34 | 0.00 | 2.160 | 13.08 | 0.36 | 4.3 | 95.7 | 0.0 | 1.44 | 1.61 | 0.63 | 0.66 | 0.63 | 13570 | 1760 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y0N | 33550 | 2023-12-15 | 2022-06-05 | 3.8 | 4.14 | 3.88 | 3.9 | 0.004 | 0.73 | 0.0 | 0.05 | 13.51 | 0.01 | 2.259 | 5.96 | 0.03 | 6.2 | 93.8 | 0.0 | -2.36 | 0.81 | 0.80 | 1.70 | 3.9 | 0.003 | 0.57 | 0.0 | 0.04 | 14.53 | 0.00 | 2.154 | 10.32 | 0.24 | 6.8 | 93.2 | 0.0 | -1.30 | 1.16 | 0.82 | 0.81 | 1.62 | 31989 | 4047 | 30 | 0 | 63 | 0 | 0 | logfile |