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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8EAT | 27985 | 2023-12-16 | 2022-08-29 | 3.1 | 3.35 | 3.09 | 3.3 | 0.004 | 0.54 | 0.0 | 0.04 | 12.78 | 0.00 | 2.047 | 5.94 | 0.00 | 2.7 | 97.3 | 0.0 | 0.06 | 0.66 | 0.80 | 3.27 | 3.3 | 0.004 | 0.51 | 0.0 | 0.04 | 14.19 | 0.00 | 1.925 | 7.50 | 0.34 | 1.9 | 98.1 | 0.0 | 2.40 | 0.38 | 0.66 | 0.82 | 3.05 | 34663 | 2349 | 15 | 0 | 0 | 0 | 17463 | logfile |
✔ | 8DM8 | 27530 | 2023-12-08 | 2022-07-08 | 2.68 | 3.21 | 2.72 | 3.1 | 0.006 | 0.89 | 0.0 | 0.06 | 13.50 | 0.01 | 2.306 | 3.39 | 0.72 | 1.8 | 98.2 | 0.0 | -0.72 | 0.78 | 0.85 | 3.05 | 3.1 | 0.004 | 0.65 | 0.0 | 0.04 | 15.95 | 0.00 | 2.184 | 8.29 | 1.88 | 3.2 | 96.8 | 0.0 | 1.32 | 1.22 | 0.79 | 0.87 | 2.70 | 6479 | 794 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7SK6 | 25174 | 2023-12-08 | 2021-10-19 | 4.0 | 4.42 | — | 4.1 | 0.018 | 1.92 | 2.0 | 0.11 | 13.16 | 0.01 | 2.462 | 0.11 | 0.76 | 4.2 | 94.0 | 1.8 | 0.35 | 0.52 | 0.52 | — | 4.1 | 0.004 | 0.62 | 0.0 | 0.04 | 14.93 | 0.00 | 2.029 | 18.19 | 0.19 | 4.7 | 95.3 | 0.0 | -0.02 | 1.47 | 0.64 | 0.72 | — | 9144 | 585 | 4 | 0 | 0 | 0 | 4462 | logfile |
✔ | 8DLR | 27512 | 2023-12-07 | 2022-07-08 | 2.51 | 3.02 | 2.49 | 2.9 | 0.006 | 0.81 | 0.0 | 0.06 | 12.71 | 0.01 | 2.291 | 3.79 | 0.00 | 2.6 | 97.4 | 0.0 | -0.80 | 0.72 | 0.84 | 5.48 | 2.9 | 0.003 | 0.58 | 0.0 | 0.04 | 14.85 | 0.00 | 2.198 | 7.33 | 1.83 | 3.2 | 96.8 | 0.0 | -0.16 | 0.36 | 0.71 | 0.85 | 5.21 | 4027 | 505 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7T9L | 25761 | 2023-12-08 | 2021-12-19 | 2.66 | 3.24 | — | 3.1 | 0.006 | 0.96 | 0.0 | 0.06 | 14.12 | 0.01 | 2.276 | 3.89 | 0.14 | 2.8 | 97.2 | 0.0 | -1.53 | 0.78 | 0.84 | 3.31 | 3.1 | 0.004 | 0.73 | 0.0 | 0.04 | 16.45 | 0.00 | 2.159 | 9.89 | 1.85 | 2.8 | 97.2 | 0.0 | 1.28 | 2.12 | 0.77 | 0.84 | 3.19 | 6567 | 796 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 8DM2 | 27524 | 2023-12-07 | 2022-07-08 | 2.91 | 3.71 | 2.85 | 3.6 | 0.007 | 1.02 | 0.0 | 0.07 | 13.37 | 0.01 | 2.362 | 4.12 | 0.44 | 2.5 | 97.5 | 0.0 | -0.51 | 0.57 | 0.66 | 2.14 | 3.6 | 0.004 | 0.74 | 0.0 | 0.05 | 15.54 | 0.00 | 2.251 | 10.66 | 3.11 | 5.0 | 95.0 | 0.0 | -0.94 | 1.73 | 0.61 | 0.75 | 3.64 | 2104 | 249 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 8DLJ | 27503 | 2023-12-14 | 2022-07-08 | 2.91 | 3.82 | 3.10 | 3.1 | 0.005 | 0.84 | 0.0 | 0.06 | 12.96 | 0.01 | 2.282 | 3.47 | 0.13 | 1.7 | 98.3 | 0.0 | 0.38 | 0.84 | 0.82 | 2.35 | 3.1 | 0.004 | 0.59 | 0.0 | 0.04 | 13.96 | 0.00 | 2.082 | 9.38 | 0.84 | 1.9 | 98.1 | 0.0 | 0.88 | 1.55 | 0.85 | 0.85 | 2.58 | 28498 | 3508 | 26 | 0 | 64 | 0 | 0 | logfile |
✔ | 7oTQ | 13065 | 2023-12-14 | 2021-06-10 | 4.8 | 5.78 | 4.82 | 5.0 | 0.004 | 0.76 | 0.0 | 0.05 | 24.90 | 0.01 | 2.055 | 6.93 | 1.26 | 4.1 | 95.5 | 0.4 | -1.44 | 0.84 | 0.78 | — | 5.0 | 0.005 | 0.68 | 0.0 | 0.04 | 24.71 | 0.01 | 2.022 | 17.30 | 0.00 | 3.8 | 96.1 | 0.2 | 0.51 | 1.51 | 0.85 | 0.79 | — | 29140 | 1214 | 11 | 298 | 0 | 0 | 13365 | logfile |
✔ | 7SY1 | 25513 | 2023-12-14 | 2021-11-24 | 2.83 | 3.75 | — | 3.0 | 0.005 | 0.82 | 0.0 | 0.06 | 12.99 | 0.01 | 2.279 | 3.00 | 0.03 | 2.0 | 98.0 | 0.0 | -0.15 | 0.85 | 0.82 | 2.41 | 3.1 | 0.003 | 0.57 | 0.0 | 0.04 | 14.10 | 0.00 | 2.160 | 7.78 | 0.65 | 2.0 | 98.0 | 0.0 | 0.86 | 0.68 | 0.86 | 0.85 | 2.51 | 28585 | 3517 | 26 | 0 | 64 | 0 | 0 | logfile |
✔ | 7N0G | 24105 | 2023-12-14 | 2021-05-25 | 3.02 | 3.70 | — | 3.4 | 0.004 | 0.60 | 0.0 | 0.05 | 17.87 | 0.00 | 2.157 | 7.77 | 0.03 | 3.2 | 96.8 | 0.0 | 0.27 | 0.85 | 0.83 | 2.27 | 3.3 | 0.006 | 0.62 | 0.0 | 0.05 | 14.68 | 0.00 | 2.134 | 8.61 | 0.19 | 3.6 | 96.4 | 0.0 | 0.38 | 1.13 | 0.85 | 0.85 | 2.35 | 29062 | 3592 | 28 | 0 | 73 | 0 | 0 | logfile |
✔ | 8BiP | 16086 | 2023-12-13 | 2022-11-02 | 3.1 | 3.81 | 3.14 | 3.3 | 0.003 | 0.54 | 1.0 | 0.03 | 21.22 | 0.00 | 1.794 | 11.10 | 0.12 | 4.7 | 95.3 | 0.1 | -0.06 | 0.77 | 0.88 | 2.78 | 3.3 | 0.006 | 0.64 | 0.0 | 0.04 | 21.39 | 0.00 | 1.815 | 13.01 | 0.64 | 6.0 | 93.9 | 0.1 | -0.34 | 0.34 | 0.78 | 0.90 | 2.36 | 134392 | 7222 | 62 | 3580 | 234 | 0 | 0 | logfile |
✔ | 7E9o | 31034 | 2023-12-16 | 2021-03-04 | 3.41 | 3.80 | — | 3.7 | 0.007 | 0.82 | 4.0 | 0.05 | 16.68 | 0.01 | 2.202 | 10.68 | 0.24 | 4.9 | 95.1 | 0.0 | -1.55 | 0.70 | 0.78 | 2.10 | 3.7 | 0.007 | 0.76 | 0.0 | 0.05 | 15.05 | 0.00 | 2.112 | 11.50 | 0.19 | 7.3 | 92.7 | 0.0 | -1.19 | 1.18 | 0.72 | 0.81 | 2.06 | 33876 | 4338 | 12 | 0 | 27 | 0 | 0 | logfile |
✔ | 8DLT | 27515 | 2023-12-13 | 2022-07-08 | 2.4 | 3.35 | 2.60 | 2.8 | 0.005 | 0.76 | 0.0 | 0.05 | 12.93 | 0.01 | 2.220 | 2.75 | 0.00 | 1.7 | 98.3 | 0.0 | 0.21 | 0.85 | 0.84 | 3.11 | 2.8 | 0.006 | 0.62 | 0.0 | 0.05 | 13.57 | 0.00 | 2.112 | 8.42 | 0.80 | 2.9 | 97.1 | 0.0 | 0.46 | 1.13 | 0.85 | 0.86 | 2.89 | 25245 | 3120 | 24 | 0 | 60 | 0 | 0 | logfile |
✔ | 7SY2 | 25514 | 2023-12-08 | 2021-11-24 | 3.11 | 3.85 | — | 3.5 | 0.005 | 0.84 | 0.0 | 0.06 | 13.46 | 0.01 | 2.307 | 2.03 | 0.14 | 1.4 | 98.6 | 0.0 | -0.46 | 0.82 | 0.85 | 2.53 | 3.5 | 0.004 | 0.57 | 0.0 | 0.04 | 15.04 | 0.00 | 2.190 | 8.99 | 0.00 | 3.0 | 97.0 | 0.0 | 1.69 | 1.15 | 0.83 | 0.87 | 2.52 | 6554 | 797 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 6VQU | 21357 | 2023-12-11 | 2020-02-05 | 3.88 | 4.99 | 3.94 | 4.1 | 0.007 | 0.94 | 0.0 | 0.06 | 14.62 | 0.01 | 2.276 | 5.09 | 1.70 | 3.4 | 96.6 | 0.0 | -2.26 | 0.73 | 0.86 | 0.46 | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 14.96 | 0.00 | 2.196 | 12.02 | 0.32 | 2.6 | 97.4 | 0.0 | 2.01 | 1.05 | 0.73 | 0.88 | 0.26 | 9156 | 1178 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SXZ | 25511 | 2023-12-14 | 2021-11-24 | 2.61 | 3.54 | — | 2.9 | 0.005 | 0.82 | 0.0 | 0.06 | 12.89 | 0.01 | 2.280 | 3.23 | 0.00 | 2.0 | 98.0 | 0.0 | -0.12 | 0.83 | 0.83 | 2.27 | 2.9 | 0.003 | 0.58 | 0.0 | 0.04 | 14.07 | 0.00 | 2.193 | 8.31 | 0.52 | 1.9 | 98.1 | 0.0 | 0.96 | 1.56 | 0.82 | 0.82 | 2.55 | 28583 | 3517 | 26 | 0 | 64 | 0 | 0 | logfile |
✔ | 8F6F | 28882 | 2023-12-09 | 2022-11-16 | 3.6 | 3.88 | 3.63 | 3.9 | 0.003 | 0.52 | 0.0 | 0.04 | 13.45 | 0.00 | 2.011 | 6.45 | 0.09 | 4.6 | 95.3 | 0.2 | -0.37 | 0.75 | 0.82 | 2.79 | 3.9 | 0.004 | 0.68 | 0.0 | 0.04 | 15.48 | 0.00 | 1.906 | 8.64 | 0.62 | 6.1 | 93.8 | 0.2 | -0.05 | 1.18 | 0.72 | 0.81 | 2.52 | 10344 | 1344 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 8DLN | 27507 | 2023-12-08 | 2022-07-08 | 3.04 | 3.75 | 3.10 | 3.4 | 0.005 | 0.86 | 0.0 | 0.06 | 13.35 | 0.01 | 2.303 | 2.81 | 0.29 | 1.8 | 98.2 | 0.0 | -0.21 | 0.83 | 0.85 | 3.19 | 3.5 | 0.004 | 0.59 | 0.0 | 0.04 | 14.90 | 0.00 | 2.207 | 9.30 | 0.14 | 2.8 | 97.2 | 0.0 | 1.91 | 2.32 | 0.84 | 0.87 | 2.93 | 6553 | 797 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 7SY6 | 25518 | 2023-12-08 | 2021-11-24 | 2.81 | 3.51 | — | 3.2 | 0.005 | 0.86 | 0.0 | 0.06 | 13.40 | 0.01 | 2.296 | 2.58 | 0.14 | 2.3 | 97.7 | 0.0 | -0.71 | 0.83 | 0.86 | 3.13 | 3.2 | 0.005 | 0.68 | 0.0 | 0.04 | 15.68 | 0.00 | 2.190 | 9.69 | 2.57 | 1.8 | 98.2 | 0.0 | 1.57 | 0.61 | 0.82 | 0.86 | 2.83 | 6553 | 797 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 7S8V | 24927 | 2023-12-09 | 2021-09-20 | 3.73 | 4.42 | — | 3.9 | 0.004 | 0.65 | 0.0 | 0.09 | 12.71 | 0.00 | 2.098 | 5.61 | 0.14 | 7.0 | 93.0 | 0.0 | -3.48 | 0.68 | 0.64 | 0.04 | 3.9 | 0.004 | 0.68 | 0.0 | 0.04 | 13.92 | 0.01 | 1.959 | 15.97 | 0.00 | 10.4 | 89.6 | 0.0 | -2.12 | 1.58 | 0.70 | 0.71 | 0.57 | 12502 | 782 | 7 | 0 | 12 | 0 | 6045 | logfile |