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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6V4J | 21041 | 2023-12-14 | 2019-11-27 | 2.97 | 2.66 | — | 2.6 | 0.010 | 1.79 | 8.0 | 0.09 | 13.20 | 0.01 | 0.244 | 16.47 | 5.36 | 4.0 | 95.7 | 0.3 | -0.54 | 0.47 | 0.48 | 1.90 | 2.6 | 0.003 | 0.81 | 0.0 | 0.04 | 16.33 | 0.00 | 2.100 | 13.99 | 3.48 | 4.6 | 95.4 | 0.0 | -1.07 | 1.53 | 0.48 | 0.50 | 1.34 | 20637 | 2697 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZXD | 11517 | 2023-12-14 | 2020-07-29 | 3.2 | 3.08 | 3.17 | 3.1 | 0.007 | 0.94 | 0.0 | 0.05 | 21.37 | 0.01 | 0.254 | 5.75 | 0.21 | 7.2 | 92.6 | 0.2 | -3.93 | 0.76 | 0.76 | 2.67 | 3.1 | 0.004 | 0.64 | 0.0 | 0.04 | 21.53 | 0.00 | 2.041 | 8.96 | 0.43 | 5.0 | 95.0 | 0.1 | -0.97 | 1.17 | 0.77 | 0.79 | 2.11 | 80922 | 5944 | 39 | 1645 | 2 | 0 | 0 | logfile |
✔ | 6CB1 | 7445 | 2023-12-12 | 2018-02-01 | 4.6 | 4.77 | — | 4.6 | 0.006 | 1.02 | 0.0 | 0.06 | 22.81 | 0.00 | 0.266 | 5.97 | 0.00 | 5.0 | 94.8 | 0.1 | -2.68 | 0.66 | 0.49 | — | 4.5 | 0.003 | 0.69 | 0.0 | 0.04 | 22.78 | 0.00 | 2.059 | 17.49 | 0.00 | 7.8 | 92.2 | 0.0 | -0.71 | 1.92 | 0.75 | 0.74 | — | 69945 | 6459 | 42 | 1615 | 694 | 0 | 0 | logfile |
✔ | 8SEW | 40431 | 2023-12-12 | 2023-04-10 | 2.89 | 2.97 | 2.87 | 3.0 | 0.004 | 0.59 | 0.0 | 0.04 | 12.56 | 0.00 | 0.267 | 5.77 | 2.14 | 2.1 | 97.7 | 0.2 | 1.93 | 0.60 | 0.79 | 2.44 | 3.0 | 0.003 | 0.58 | 0.0 | 0.04 | 16.35 | 0.00 | 2.215 | 6.47 | 1.20 | 1.6 | 98.2 | 0.2 | 1.93 | 0.57 | 0.61 | 0.81 | 2.28 | 20716 | 2516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 5NGM | 3640 | 2023-12-15 | 2017-03-18 | 2.9 | 3.05 | — | 3.0 | 0.006 | 0.86 | 0.0 | 0.05 | 23.26 | 0.01 | 0.270 | 7.58 | 0.81 | 8.3 | 91.7 | 0.0 | -4.79 | 0.70 | 0.72 | 2.80 | 3.0 | 0.005 | 0.61 | 0.0 | 0.04 | 23.17 | 0.00 | 1.861 | 11.90 | 4.56 | 6.5 | 93.5 | 0.0 | -1.85 | 0.65 | 0.77 | 0.85 | 2.12 | 140965 | 5610 | 57 | 4559 | 205 | 0 | 0 | logfile |
✔ | 8PDM | 17614 | 2023-12-15 | 2023-06-12 | 3.3 | 3.51 | 3.38 | 3.5 | 0.006 | 0.73 | 0.0 | 0.05 | 15.48 | 0.01 | 0.279 | 15.39 | 0.00 | 2.0 | 98.0 | 0.0 | 0.75 | 0.75 | 0.79 | 1.66 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 17.12 | 0.00 | 2.149 | 10.61 | 0.34 | 2.9 | 97.1 | 0.0 | 1.42 | 1.23 | 0.77 | 0.81 | 0.90 | 31471 | 3861 | 22 | 77 | 0 | 0 | 0 | logfile |
✔ | 8EEP | 28054 | 2023-12-08 | 2022-09-07 | 2.2 | 2.31 | 2.33 | 2.3 | 0.004 | 1.00 | 0.0 | 0.71 | 22.11 | 0.00 | 0.286 | 7.98 | 1.59 | 0.0 | 100.0 | 0.0 | 1.98 | 0.74 | 0.81 | 4.21 | 2.3 | 0.033 | 1.73 | 0.0 | 0.12 | 19.27 | 0.01 | 1.901 | 9.78 | 1.53 | 1.0 | 99.0 | 0.0 | 1.36 | 1.38 | 0.74 | 0.82 | 3.94 | 108060 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 8DMG | 27536 | 2023-12-11 | 2022-07-08 | 4.4 | 5.39 | 4.50 | 4.6 | 0.029 | 2.33 | 20.0 | 0.12 | 16.95 | 0.01 | 0.312 | 28.72 | 6.80 | 6.0 | 92.3 | 1.7 | -2.43 | 0.79 | 0.61 | — | 4.6 | 0.003 | 0.62 | 0.0 | 0.04 | 13.58 | 0.00 | 1.880 | 73.68 | 0.00 | 5.7 | 94.2 | 0.0 | 0.39 | 2.25 | 0.93 | 0.84 | — | 16844 | 2068 | 4 | 0 | 18 | 0 | 202 | logfile |
✔ | 6S61 | 10101 | 2023-12-12 | 2019-07-02 | 1.84 | 1.89 | 1.85 | 1.9 | 0.011 | 1.36 | 0.0 | 0.06 | 12.21 | 0.01 | 0.312 | 2.62 | 1.29 | 1.8 | 98.2 | 0.0 | 3.69 | 0.77 | 0.86 | 8.46 | 1.9 | 0.003 | 0.58 | 0.0 | 0.03 | 14.85 | 0.00 | 1.796 | 5.05 | 0.65 | 1.3 | 98.7 | 0.0 | 4.51 | 0.74 | 0.80 | 0.90 | 8.65 | 71060 | 4128 | 72 | 0 | 30 | 3854 | 32904 | logfile |
✔ | 8EET | 28057 | 2023-12-07 | 2022-09-07 | 3.1 | 3.36 | 3.21 | 3.4 | 0.007 | 0.92 | 0.0 | 0.06 | 12.42 | 0.00 | 0.312 | 9.93 | 1.07 | 0.5 | 99.5 | 0.0 | 1.87 | 0.72 | 0.82 | 3.55 | 3.4 | 0.037 | 2.68 | 0.0 | 0.26 | 21.44 | 0.00 | 0.591 | 11.72 | 0.12 | 1.0 | 99.0 | 0.0 | 2.41 | 1.30 | 0.66 | 0.80 | 2.54 | 107640 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 6TA3 | 10421 | 2023-12-09 | 2019-10-29 | 3.8 | 4.18 | — | 3.9 | 0.024 | 2.45 | 4.0 | 0.08 | 18.96 | 0.01 | 0.317 | 210.72 | 16.02 | 0.8 | 99.2 | 0.0 | 1.86 | 0.67 | 0.49 | 0.26 | 4.0 | 0.004 | 0.89 | 0.0 | 0.05 | 17.96 | 0.01 | 1.304 | 29.48 | 0.97 | 3.6 | 96.3 | 0.1 | -0.10 | 2.43 | 0.78 | 0.74 | 0.37 | 9491 | 1201 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 8SPo | 40680 | 2023-12-15 | 2023-05-03 | 2.98 | 2.34 | 3.17 | 2.1 | 0.004 | 0.60 | 0.0 | 0.26 | 18.57 | 0.00 | 0.334 | 11.05 | 0.00 | 6.0 | 94.0 | 0.0 | -1.15 | 0.46 | 0.30 | 0.19 | 1.6 | 0.003 | 0.72 | 0.0 | 0.04 | 18.63 | 0.00 | 1.820 | 12.08 | 1.50 | 5.8 | 94.2 | 0.0 | -1.35 | 2.06 | 0.57 | 0.48 | 1.11 | 31307 | 3428 | 22 | 154 | 6 | 0 | 0 | logfile |
✔ | 6GJ1 | 0009 | 2023-12-10 | 2018-05-15 | 4.7 | 4.83 | — | 4.4 | 0.010 | 1.51 | 5.0 | 0.07 | 11.65 | 0.01 | 0.341 | 23.90 | 0.72 | 18.3 | 81.3 | 0.4 | -5.15 | 0.83 | 0.71 | — | 4.4 | 0.003 | 0.89 | 0.0 | 0.05 | 12.57 | 0.01 | 2.086 | 22.39 | 0.00 | 16.4 | 83.4 | 0.1 | -3.83 | 1.16 | 0.85 | 0.76 | — | 13013 | 1638 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HD7 | 0202 | 2023-12-16 | 2018-08-17 | 3.4 | 3.54 | — | 3.3 | 0.002 | 0.43 | 0.0 | 0.03 | 21.17 | 0.00 | 0.345 | 24.96 | 0.08 | 11.1 | 87.1 | 1.9 | -3.26 | 0.66 | 0.65 | 0.74 | 3.3 | 0.006 | 0.73 | 0.0 | 0.04 | 22.48 | 0.00 | 2.009 | 16.69 | 0.58 | 6.9 | 92.7 | 0.4 | -1.33 | 1.54 | 0.76 | 0.87 | 1.66 | 141153 | 7514 | 52 | 3767 | 234 | 0 | 0 | logfile |
✔ | 6RDB | 4812 | 2023-12-16 | 2019-04-12 | 2.8 | 2.89 | 2.82 | 2.9 | 0.008 | 1.00 | 0.0 | 0.06 | 15.16 | 0.01 | 0.351 | 8.68 | 1.23 | 4.1 | 95.8 | 0.1 | -4.44 | 0.70 | 0.84 | 3.24 | 2.9 | 0.009 | 0.68 | 0.0 | 0.04 | 16.56 | 0.00 | 1.860 | 10.69 | 1.91 | 3.7 | 96.3 | 0.0 | -0.08 | 0.53 | 0.70 | 0.86 | 2.95 | 33961 | 4506 | 31 | 0 | 10 | 40 | 0 | logfile |
✔ | 7o3W | 12710 | 2023-12-14 | 2021-04-03 | 4.9 | 6.81 | 5.80 | 7.1 | 0.017 | 1.84 | 0.0 | 0.11 | 18.08 | 0.01 | 0.360 | 24.19 | 0.30 | 3.5 | 96.4 | 0.2 | 1.74 | 0.66 | 0.54 | — | 7.1 | 0.004 | 0.92 | 0.0 | 0.04 | 15.52 | 0.00 | 1.988 | 27.22 | 0.01 | 1.6 | 98.3 | 0.1 | 1.59 | 2.07 | 0.75 | 0.81 | — | 138390 | 17976 | 98 | 0 | 14 | 0 | 0 | logfile |
✔ | 6EML | 3886 | 2023-12-13 | 2017-10-02 | 3.6 | 3.65 | — | 3.6 | 0.014 | 1.54 | 11.0 | 0.10 | 22.09 | 0.01 | 0.382 | 12.80 | 1.27 | 12.5 | 86.2 | 1.3 | -4.67 | 0.66 | 0.77 | 2.11 | 3.6 | 0.003 | 0.72 | 0.0 | 0.04 | 22.12 | 0.00 | 2.063 | 15.67 | 0.65 | 11.2 | 88.6 | 0.2 | -1.99 | 1.33 | 0.67 | 0.78 | 1.60 | 75886 | 5233 | 32 | 1675 | 0 | 0 | 0 | logfile |
✔ | 6SD3 | 10147 | 2023-12-09 | 2019-07-26 | 3.3 | 3.67 | — | 3.2 | 0.008 | 0.84 | 19.0 | 0.04 | 13.90 | 0.01 | 0.390 | 14.32 | 1.24 | 10.8 | 88.5 | 0.7 | -5.37 | 0.79 | 0.84 | 2.93 | 3.2 | 0.004 | 0.66 | 0.0 | 0.04 | 15.25 | 0.00 | 2.129 | 11.50 | 0.31 | 3.7 | 96.2 | 0.0 | -0.58 | 0.68 | 0.79 | 0.85 | 2.38 | 63144 | 8212 | 34 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CL1 | 16709 | 2023-12-10 | 2023-02-16 | 3.35 | 3.67 | 2.87 | 3.6 | 0.008 | 0.93 | 0.0 | 0.06 | 12.18 | 0.01 | 0.393 | 14.11 | 0.54 | 0.0 | 99.1 | 0.9 | -1.05 | 0.61 | 0.75 | 3.54 | 3.7 | 0.003 | 0.59 | 0.0 | 0.04 | 15.11 | 0.01 | 2.263 | 10.87 | 0.18 | 1.8 | 97.7 | 0.5 | 2.09 | 0.67 | 0.64 | 0.77 | 3.02 | 10494 | 1362 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KZo | 23084 | 2023-12-07 | 2020-12-10 | 3.3 | 2.88 | — | 3.3 | 0.005 | 0.86 | 1.0 | 0.05 | 15.08 | 0.01 | 0.399 | 14.01 | 0.29 | 4.0 | 96.0 | 0.0 | -1.81 | 0.77 | 0.76 | 2.07 | 3.3 | 0.003 | 0.69 | 0.0 | 0.04 | 16.96 | 0.00 | 1.885 | 11.64 | 0.33 | 3.3 | 96.7 | 0.0 | 0.34 | 1.51 | 0.78 | 0.79 | 1.68 | 54110 | 6873 | 34 | 8 | 14 | 0 | 0 | logfile |