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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CK0 | 16688 | 2023-12-07 | 2023-02-14 | 3.8 | 3.83 | 3.70 | 3.8 | 0.005 | 0.80 | 0.0 | 0.05 | 16.63 | 0.01 | 2.259 | 15.81 | 0.00 | 5.3 | 94.7 | 0.0 | 0.79 | 0.17 | 0.78 | 1.47 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 17.61 | 0.00 | 2.237 | 10.99 | 0.24 | 4.0 | 96.0 | 0.0 | 2.20 | 0.72 | 0.18 | 0.78 | 1.71 | 3762 | 478 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KVE | 23048 | 2023-12-09 | 2020-11-27 | 3.3 | 3.69 | 3.38 | 3.6 | 0.005 | 0.82 | 2.0 | 0.05 | 14.67 | 0.00 | 2.204 | 17.32 | 0.57 | 18.2 | 81.4 | 0.4 | -5.88 | 0.75 | 0.73 | 2.61 | 3.6 | 0.003 | 0.69 | 0.0 | 0.05 | 16.52 | 0.01 | 2.162 | 12.03 | 0.08 | 12.6 | 87.4 | 0.0 | -4.06 | 1.20 | 0.75 | 0.73 | 2.24 | 11142 | 1374 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LCJ | 23275 | 2023-12-07 | 2021-01-11 | 2.82 | 3.02 | 2.78 | 3.1 | 0.011 | 1.19 | 3.0 | 0.08 | 13.41 | 0.01 | 2.216 | 8.89 | 1.16 | 3.9 | 96.1 | 0.0 | 0.54 | 0.46 | 0.80 | 2.75 | 3.1 | 0.003 | 0.54 | 0.0 | 0.04 | 15.49 | 0.00 | 2.248 | 4.68 | 0.58 | 2.6 | 97.4 | 0.0 | 1.11 | 1.69 | 0.48 | 0.82 | 3.04 | 3264 | 390 | 1 | 0 | 1 | 17 | 0 | logfile |
✔ | 6oR5 | 9032 | 2023-12-09 | 2019-04-29 | 4.0 | 4.23 | — | 3.9 | 0.008 | 1.12 | 0.0 | 0.05 | 15.95 | 0.00 | 2.245 | 4.84 | 0.00 | 17.3 | 82.4 | 0.3 | -5.53 | 0.76 | 0.79 | — | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 9.86 | 0.00 | 2.214 | 4.84 | 0.00 | 14.6 | 85.4 | 0.0 | -1.65 | 1.34 | 0.78 | 0.80 | — | 10364 | 2058 | 1 | 0 | 5 | 0 | 0 | logfile |
✔ | 7WHM | 32504 | 2023-12-09 | 2021-12-31 | 2.7 | 2.86 | — | 2.8 | 0.006 | 0.64 | 0.0 | 0.05 | 13.85 | 0.00 | 2.155 | 6.30 | 0.00 | 3.1 | 96.9 | 0.0 | 0.15 | 0.43 | 0.87 | 4.68 | 2.8 | 0.003 | 0.51 | 0.0 | 0.04 | 15.95 | 0.00 | 2.260 | 5.62 | 0.56 | 2.3 | 97.7 | 0.0 | 1.45 | 1.11 | 0.40 | 0.84 | 3.69 | 9650 | 1214 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MSW | 23970 | 2023-12-09 | 2021-05-12 | 3.76 | 3.93 | 3.60 | 3.8 | 0.009 | 0.66 | 0.0 | 0.05 | 10.62 | 0.00 | 1.933 | 0.81 | 0.00 | 2.5 | 97.3 | 0.2 | -0.01 | 0.79 | 0.80 | 1.87 | 3.8 | 0.003 | 0.56 | 0.0 | 0.04 | 13.92 | 0.00 | 2.055 | 6.38 | 0.37 | 4.6 | 95.4 | 0.0 | 0.13 | 1.29 | 0.79 | 0.81 | 1.73 | 9881 | 635 | 1 | 0 | 3 | 0 | 4959 | logfile |
✔ | 7N5G | 24189 | 2023-12-07 | 2021-06-05 | 2.4 | 2.16 | 2.42 | 1.5 | 0.022 | 1.51 | 0.0 | 0.09 | 10.57 | 0.01 | 2.386 | 0.17 | 0.00 | 0.8 | 99.2 | 0.0 | 1.84 | 0.40 | 0.79 | 3.64 | 1.5 | 0.003 | 0.57 | 0.0 | 0.04 | 16.52 | 0.00 | 2.220 | 4.78 | 2.61 | 1.4 | 98.6 | 0.0 | 2.92 | 1.20 | 0.39 | 0.80 | 2.57 | 2926 | 371 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6X2Z | 22014 | 2023-12-07 | 2020-05-21 | 3.03 | 3.18 | — | 3.2 | 0.005 | 0.84 | 0.0 | 0.05 | 15.51 | 0.01 | 2.131 | 6.52 | 0.00 | 3.6 | 96.4 | 0.0 | -5.65 | 0.44 | 0.86 | 2.63 | 3.2 | 0.003 | 0.67 | 0.0 | 0.04 | 16.15 | 0.00 | 2.195 | 9.40 | 0.28 | 2.9 | 97.1 | 0.0 | 0.74 | 0.96 | 0.44 | 0.87 | 2.26 | 3205 | 420 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 8EA0 | 27970 | 2023-12-07 | 2022-08-27 | 2.56 | 2.05 | 2.66 | 1.9 | 0.003 | 0.55 | 0.0 | 0.04 | 13.66 | 0.00 | 2.237 | 8.88 | 0.00 | 4.3 | 95.7 | 0.0 | -0.24 | 0.72 | 0.77 | 2.21 | 1.9 | 0.003 | 0.54 | 0.0 | 0.04 | 14.49 | 0.00 | 2.006 | 9.10 | 0.42 | 4.6 | 95.4 | 0.0 | 1.39 | 0.36 | 0.74 | 0.80 | 2.78 | 2286 | 285 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7RSQ | 24677 | 2023-12-07 | 2021-08-11 | 3.8 | 4.03 | 3.73 | 4.1 | 0.008 | 0.80 | 0.0 | 0.05 | 12.74 | 0.00 | 2.360 | 4.01 | 2.88 | 3.0 | 97.0 | 0.0 | -0.64 | 0.63 | 0.68 | 1.39 | 4.1 | 0.003 | 0.55 | 0.0 | 0.03 | 15.51 | 0.00 | 2.389 | 3.51 | 0.00 | 3.5 | 96.5 | 0.0 | 2.09 | 1.84 | 0.64 | 0.72 | 1.77 | 3970 | 246 | 1 | 0 | 0 | 0 | 1958 | logfile |
✔ | 7RPJ | 24616 | 2023-12-08 | 2021-08-03 | 3.2 | 3.54 | 3.29 | 3.6 | 0.014 | 1.72 | 5.0 | 0.10 | 13.32 | 0.01 | 2.458 | 3.51 | 0.98 | 4.5 | 95.4 | 0.1 | -1.66 | 0.57 | 0.65 | 2.39 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 13.68 | 0.00 | 2.142 | 8.27 | 0.37 | 3.1 | 96.9 | 0.0 | 1.51 | 1.12 | 0.65 | 0.82 | 1.85 | 7926 | 926 | 1 | 0 | 19 | 0 | 0 | logfile |
✔ | 7UUY | 26806 | 2023-12-07 | 2022-04-29 | 3.3 | 3.47 | 3.28 | 3.5 | 0.004 | 0.58 | 0.0 | 0.04 | 13.50 | 0.00 | 2.067 | 5.68 | 0.25 | 5.5 | 94.5 | 0.0 | 0.72 | 0.61 | 0.84 | 2.03 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 14.73 | 0.00 | 2.192 | 7.36 | 0.25 | 4.4 | 95.6 | 0.0 | 1.37 | 1.11 | 0.59 | 0.83 | 1.48 | 3809 | 503 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 8CSW | 26973 | 2023-12-07 | 2022-05-13 | 2.5 | 2.22 | 2.46 | 2.3 | 0.007 | 0.86 | 0.0 | 0.06 | 14.46 | 0.01 | 2.219 | 5.03 | 2.33 | 1.2 | 98.8 | 0.0 | 0.83 | 0.64 | 0.88 | 6.02 | 2.3 | 0.002 | 0.52 | 0.0 | 0.04 | 16.70 | 0.00 | 2.152 | 4.25 | 1.25 | 1.4 | 98.6 | 0.0 | 1.11 | 0.50 | 0.62 | 0.88 | 5.56 | 5332 | 657 | 1 | 0 | 0 | 165 | 0 | logfile |
✔ | 7KU5 | 23034 | 2023-12-07 | 2020-11-24 | 3.76 | 3.63 | — | 3.9 | 0.006 | 1.29 | 0.0 | 0.07 | 14.85 | 0.01 | 2.420 | 3.63 | 0.00 | 12.8 | 87.2 | 0.0 | -5.41 | 0.23 | 0.65 | -0.48 | 3.9 | 0.002 | 0.72 | 0.0 | 0.04 | 15.66 | 0.01 | 2.252 | 10.89 | 0.00 | 9.3 | 90.7 | 0.0 | -1.34 | 1.18 | 0.24 | 0.69 | 2.46 | 750 | 88 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7UZS | 26917 | 2023-12-09 | 2022-05-09 | 2.2 | 2.05 | 2.19 | 2.0 | 0.004 | 0.72 | 0.0 | 0.05 | 17.96 | 0.01 | 2.217 | 2.70 | 1.79 | 1.1 | 98.9 | 0.0 | 1.09 | 0.64 | 0.87 | 6.60 | 2.1 | 0.004 | 0.58 | 0.0 | 0.04 | 17.95 | 0.00 | 2.032 | 4.06 | 2.50 | 2.2 | 97.8 | 0.0 | 1.07 | 0.31 | 0.64 | 0.87 | 6.19 | 10550 | 658 | 1 | 0 | 0 | 193 | 5183 | logfile |
✔ | 7W88 | 32353 | 2023-12-08 | 2021-12-07 | 3.5 | 3.65 | — | 3.6 | 0.003 | 0.71 | 0.0 | 0.04 | 16.87 | 0.00 | 2.225 | 15.29 | 8.23 | 15.2 | 84.8 | 0.0 | -5.15 | 0.70 | 0.69 | 1.82 | 3.6 | 0.003 | 0.75 | 0.0 | 0.04 | 17.22 | 0.00 | 2.213 | 16.13 | 0.64 | 15.3 | 84.7 | 0.0 | -3.13 | 0.94 | 0.70 | 0.69 | 1.73 | 7138 | 896 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RD6 | 24413 | 2023-12-08 | 2021-07-09 | 3.25 | 3.44 | — | 3.4 | 0.004 | 0.79 | 0.0 | 0.05 | 14.65 | 0.00 | 2.183 | 9.73 | 0.00 | 5.3 | 94.7 | 0.0 | -1.73 | 0.56 | 0.70 | 2.23 | 3.4 | 0.003 | 0.66 | 0.0 | 0.04 | 16.29 | 0.00 | 2.135 | 14.09 | 0.12 | 6.0 | 94.0 | 0.0 | -1.38 | 0.42 | 0.57 | 0.73 | 2.17 | 7396 | 929 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7MSX | 23971 | 2023-12-07 | 2021-05-12 | 3.15 | 3.24 | 3.04 | 3.2 | 0.008 | 0.62 | 0.0 | 0.05 | 10.30 | 0.00 | 2.385 | 0.81 | 0.00 | 1.9 | 98.1 | 0.0 | 0.06 | 0.77 | 0.85 | 3.76 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 14.93 | 0.00 | 2.204 | 4.88 | 0.25 | 1.9 | 98.1 | 0.0 | 1.12 | 1.12 | 0.78 | 0.88 | 3.52 | 3706 | 473 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 6RJU | 4906 | 2023-12-07 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 3.9 | 0.003 | 0.71 | 0.0 | 0.03 | 16.08 | 0.00 | 2.061 | 8.55 | 1.01 | 6.2 | 93.8 | 0.0 | -1.13 | 1.35 | 0.28 | 0.06 | -0.23 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 7WHN | 32505 | 2023-12-08 | 2021-12-31 | 3.3 | 2.99 | — | 3.2 | 0.009 | 0.80 | 0.0 | 0.05 | 13.81 | 0.01 | 2.147 | 7.64 | 0.10 | 4.5 | 95.5 | 0.0 | -1.29 | 0.41 | 0.83 | 2.92 | 3.2 | 0.002 | 0.49 | 0.0 | 0.04 | 15.00 | 0.00 | 2.281 | 5.47 | 0.10 | 2.7 | 97.3 | 0.0 | 0.94 | 0.40 | 0.37 | 0.82 | 2.21 | 9284 | 1170 | 1 | 0 | 0 | 0 | 0 | logfile |