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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7TK8 | 25960 | 2023-12-12 | 2022-01-17 | 4.7 | 7.79 | 12.86 | 4.4 | 0.019 | 2.21 | 0.0 | 0.00 | 6.68 | 0.01 | 2.390 | 0.08 | 0.00 | 4.1 | 94.4 | 1.5 | -0.46 | 0.60 | 0.62 | — | 4.4 | 0.007 | 1.06 | 0.0 | 0.00 | 6.46 | 0.01 | 1.965 | 24.73 | 0.00 | 11.5 | 88.2 | 0.3 | -0.96 | 1.58 | 0.81 | 0.81 | — | 20227 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKH | 25969 | 2023-12-12 | 2022-01-17 | 4.4 | 7.29 | 4.45 | 4.2 | 0.019 | 2.19 | 0.0 | 0.00 | 6.81 | 0.01 | 2.385 | 0.08 | 0.00 | 3.9 | 94.7 | 1.4 | -0.35 | 0.59 | 0.62 | — | 4.2 | 0.018 | 1.32 | 0.0 | 0.00 | 7.42 | 0.01 | 1.974 | 32.32 | 0.00 | 15.1 | 84.5 | 0.3 | -2.28 | 1.70 | 0.83 | 0.84 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKP | 25977 | 2023-12-12 | 2022-01-17 | 4.6 | 7.57 | 4.97 | 4.4 | 0.019 | 2.20 | 0.0 | 0.00 | 6.68 | 0.01 | 2.352 | 0.12 | 0.00 | 4.2 | 94.5 | 1.3 | -0.50 | 0.60 | 0.63 | — | 4.4 | 0.004 | 0.83 | 0.0 | 0.00 | 5.67 | 0.00 | 2.069 | 13.64 | 0.00 | 9.3 | 90.5 | 0.2 | -0.09 | 0.76 | 0.78 | 0.81 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9Y | 24264 | 2023-12-08 | 2021-06-18 | 4.8 | 4.30 | — | 2.2 | 0.019 | 1.07 | 0.0 | 0.00 | 6.04 | 0.00 | 2.538 | 0.59 | 0.00 | 8.5 | 91.1 | 0.3 | -1.98 | 0.49 | 0.33 | — | 2.2 | 0.003 | 1.01 | 0.0 | 0.00 | 4.81 | 0.00 | 2.550 | 7.73 | 0.00 | 18.2 | 81.3 | 0.5 | -4.24 | 2.61 | 0.52 | 0.31 | — | 7515 | 2505 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YW7 | 10960 | 2023-12-07 | 2020-04-29 | 4.5 | 5.21 | — | 4.7 | 0.021 | 3.50 | 0.0 | 0.09 | 8.08 | 0.01 | 2.034 | 2.17 | 0.00 | 4.5 | 94.7 | 0.9 | -1.45 | 0.57 | 0.32 | — | 4.6 | 0.003 | 0.99 | 0.0 | 0.02 | 6.66 | 0.00 | 2.225 | 16.71 | 0.00 | 11.5 | 88.3 | 0.2 | -3.14 | 5.69 | 0.84 | 0.64 | — | 5426 | 1788 | 9 | 0 | 2 | 0 | 0 | logfile |
✔ | 8G08 | 29649 | 2023-12-12 | 2023-01-31 | 2.8 | 3.66 | 2.85 | 3.1 | 0.005 | 0.68 | 0.0 | 0.23 | 7.76 | 0.00 | 1.824 | 0.59 | 0.00 | 2.4 | 97.6 | 0.0 | 1.01 | 0.74 | 0.70 | — | 3.3 | 0.004 | 0.68 | 0.0 | 0.02 | 6.39 | 0.00 | 1.808 | 1.98 | 0.00 | 7.2 | 92.8 | 0.0 | 1.27 | 1.85 | 0.81 | 0.79 | — | 19595 | 4859 | 26 | 0 | 10 | 0 | 0 | logfile |
✔ | 6Y5D | 10694 | 2023-12-15 | 2020-02-25 | 4.1 | 5.00 | — | 4.0 | 0.013 | 1.23 | 0.0 | 0.07 | 25.76 | 0.01 | 2.251 | 1.31 | 0.11 | 2.0 | 97.9 | 0.1 | 0.59 | 0.86 | 0.76 | — | 4.0 | 0.004 | 0.62 | 0.0 | 0.03 | 25.90 | 0.00 | 1.958 | 9.59 | 0.00 | 2.3 | 97.7 | 0.0 | 1.05 | 1.26 | 0.87 | 0.78 | — | 30372 | 2218 | 31 | 612 | 11 | 0 | 0 | logfile |
✔ | 6Y5E | 10695 | 2023-12-10 | 2020-02-25 | 3.15 | 3.68 | — | 3.3 | 0.014 | 1.16 | 0.0 | 0.07 | 25.71 | 0.01 | 2.429 | 0.83 | 0.21 | 1.9 | 98.0 | 0.1 | 0.54 | 0.84 | 0.83 | 4.07 | 3.3 | 0.003 | 0.58 | 0.0 | 0.03 | 25.79 | 0.00 | 2.069 | 7.56 | 0.00 | 1.7 | 98.3 | 0.0 | 2.04 | 0.64 | 0.84 | 0.85 | 2.28 | 15292 | 1120 | 18 | 306 | 9 | 0 | 0 | logfile |
✔ | 7KDT | 22829 | 2023-12-08 | 2020-10-09 | 3.05 | 3.34 | 3.19 | 3.4 | 0.012 | 1.74 | 0.0 | 0.09 | 14.56 | 0.02 | 2.562 | 0.12 | 0.47 | 1.4 | 98.6 | 0.0 | -1.64 | 0.70 | 0.77 | 2.95 | 3.3 | 0.003 | 0.51 | 0.0 | 0.03 | 16.94 | 0.00 | 2.231 | 6.20 | 0.47 | 1.6 | 98.4 | 0.0 | 2.99 | 2.12 | 0.68 | 0.79 | 2.05 | 8064 | 505 | 2 | 0 | 0 | 0 | 4042 | logfile |
✔ | 7XPX | 33385 | 2023-12-10 | 2022-05-06 | 3.2 | 3.32 | 3.18 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 27.53 | 0.00 | 2.185 | 10.26 | 0.00 | 3.6 | 96.4 | 0.0 | 0.82 | 0.67 | 0.79 | 2.86 | 3.3 | 0.003 | 0.54 | 0.0 | 0.03 | 27.32 | 0.00 | 2.174 | 9.28 | 0.26 | 2.7 | 97.3 | 0.0 | 1.50 | 1.06 | 0.57 | 0.79 | 2.29 | 13408 | 934 | 11 | 290 | 1 | 0 | 0 | logfile |
✔ | 7RQZ | 24641 | 2023-12-16 | 2021-08-08 | 3.32 | 3.07 | — | 3.3 | 0.011 | 0.96 | 0.0 | 0.06 | 18.59 | 0.00 | 2.073 | 6.78 | 0.00 | 4.8 | 95.2 | 0.0 | 0.73 | 0.59 | 0.73 | 1.63 | 3.3 | 0.003 | 0.45 | 0.0 | 0.03 | 16.85 | 0.00 | 2.104 | 4.80 | 0.18 | 3.8 | 96.2 | 0.0 | 1.07 | 0.28 | 0.60 | 0.76 | 1.50 | 32740 | 2128 | 8 | 0 | 20 | 0 | 15608 | logfile |
✔ | 7TRD | 26086 | 2023-12-09 | 2022-01-28 | 3.3 | 3.39 | — | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 21.29 | 0.00 | 2.206 | 7.50 | 0.12 | 4.3 | 95.7 | 0.0 | -0.10 | 0.79 | 0.84 | 2.70 | 3.3 | 0.004 | 0.58 | 0.0 | 0.03 | 21.18 | 0.00 | 2.147 | 5.94 | 0.25 | 4.2 | 95.8 | 0.0 | 1.03 | 0.40 | 0.80 | 0.85 | 2.50 | 12240 | 934 | 3 | 224 | 0 | 0 | 0 | logfile |
✔ | 7XGR | 33187 | 2023-12-08 | 2022-04-06 | 2.6 | 3.38 | 2.47 | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 18.88 | 0.00 | 2.259 | 8.70 | 2.17 | 6.3 | 93.7 | 0.0 | -0.28 | 0.52 | 0.75 | 2.35 | 3.2 | 0.002 | 0.61 | 0.0 | 0.03 | 19.07 | 0.00 | 2.203 | 7.19 | 1.96 | 5.8 | 94.2 | 0.0 | 2.24 | 1.25 | 0.55 | 0.83 | 2.09 | 4340 | 546 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N0K | 24107 | 2023-12-07 | 2021-05-25 | 3.5 | 4.16 | — | 4.1 | 0.003 | 0.56 | 0.0 | 0.03 | 18.36 | 0.00 | 2.238 | 8.16 | 7.46 | 1.0 | 99.0 | 0.0 | -2.20 | 0.63 | 0.77 | 1.65 | 4.1 | 0.003 | 0.61 | 0.0 | 0.03 | 19.19 | 0.00 | 2.266 | 8.55 | 0.93 | 2.3 | 97.7 | 0.0 | 3.43 | 0.71 | 0.60 | 0.75 | 0.87 | 5154 | 626 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WB0 | 32391 | 2023-12-09 | 2021-12-15 | 3.2 | 3.52 | — | 3.3 | 0.003 | 0.58 | 0.0 | 0.03 | 20.83 | 0.00 | 2.136 | 7.20 | 0.00 | 3.3 | 96.6 | 0.1 | 0.54 | 0.70 | 0.73 | 1.78 | 3.3 | 0.002 | 0.52 | 0.0 | 0.03 | 21.27 | 0.00 | 2.119 | 7.20 | 0.29 | 3.8 | 96.1 | 0.1 | 0.99 | 1.05 | 0.71 | 0.76 | 1.32 | 10096 | 797 | 4 | 175 | 0 | 0 | 0 | logfile |
✔ | 7V90 | 31806 | 2023-12-09 | 2021-08-24 | 3.5 | 3.21 | 3.42 | 3.5 | 0.005 | 0.73 | 3.0 | 0.04 | 26.09 | 0.00 | 2.219 | 8.45 | 4.01 | 4.7 | 94.8 | 0.5 | -0.16 | 0.66 | 0.78 | 2.00 | 3.4 | 0.003 | 0.53 | 0.0 | 0.03 | 27.11 | 0.00 | 2.197 | 6.64 | 0.15 | 3.7 | 96.3 | 0.0 | 2.63 | 1.09 | 0.72 | 0.83 | 2.49 | 12148 | 781 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 6o1D | 0586 | 2023-12-09 | 2019-02-19 | 3.395 | 3.57 | — | 3.5 | 0.010 | 0.95 | 1.0 | 0.05 | 28.02 | 0.01 | 2.317 | 2.17 | 0.00 | 3.4 | 96.6 | 0.0 | -4.72 | 0.79 | 0.87 | 4.13 | 3.5 | 0.004 | 0.58 | 0.0 | 0.03 | 27.47 | 0.00 | 2.138 | 7.40 | 0.16 | 1.9 | 98.1 | 0.0 | 0.37 | 0.55 | 0.79 | 0.88 | 2.82 | 11982 | 761 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 7LPC | 23476 | 2023-12-10 | 2021-02-11 | 3.06 | 2.87 | 2.85 | 3.1 | 0.013 | 1.23 | 0.0 | 0.21 | 25.02 | 0.00 | 2.188 | 5.69 | 0.00 | 2.0 | 98.0 | 0.0 | 0.83 | 0.64 | 0.80 | 2.87 | 3.1 | 0.002 | 0.46 | 0.0 | 0.03 | 17.61 | 0.00 | 2.271 | 5.16 | 0.07 | 2.3 | 97.7 | 0.0 | 2.28 | 0.56 | 0.66 | 0.84 | 3.04 | 15256 | 1816 | 8 | 0 | 40 | 0 | 0 | logfile |
✔ | 6oT5 | 20194 | 2023-12-16 | 2019-05-02 | 3.6 | 3.71 | 3.54 | 3.7 | 0.009 | 0.86 | 0.0 | 0.05 | 10.20 | 0.00 | 1.623 | 6.48 | 0.00 | 3.0 | 97.0 | 0.0 | -2.73 | 0.65 | 0.76 | 3.18 | 3.7 | 0.004 | 0.56 | 0.0 | 0.03 | 13.39 | 0.00 | 1.949 | 6.25 | 0.14 | 5.5 | 94.5 | 0.0 | 0.44 | 0.83 | 0.68 | 0.79 | 2.80 | 33420 | 2444 | 8 | 0 | 52 | 0 | 15620 | logfile |
✔ | 8E4o | 27894 | 2023-12-07 | 2022-08-18 | 3.43 | 3.87 | 3.39 | 3.6 | 0.002 | 0.44 | 0.0 | 0.03 | 11.67 | 0.01 | 2.257 | 5.45 | 0.45 | 1.8 | 98.2 | 0.0 | 2.99 | 0.68 | 0.73 | 2.38 | 3.6 | 0.003 | 0.67 | 0.0 | 0.03 | 13.40 | 0.00 | 2.006 | 6.94 | 0.07 | 2.5 | 97.5 | 0.0 | 2.74 | 0.71 | 0.72 | 0.80 | 1.94 | 53496 | 3588 | 8 | 0 | 4 | 0 | 26024 | logfile |