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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7W9B | 32363 | 2023-12-15 | 2021-12-09 | 3.4 | 3.64 | — | 3.6 | 0.004 | 0.58 | 0.0 | 0.04 | 12.34 | 0.00 | 2.057 | 1.77 | 0.03 | 2.8 | 97.2 | 0.0 | -3.40 | 0.66 | 0.69 | 1.74 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 16.11 | 0.00 | 2.132 | 10.91 | 0.18 | 3.8 | 96.2 | 0.0 | -0.30 | 1.48 | 0.68 | 0.75 | 1.61 | 29737 | 3777 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R0W | 14224 | 2023-12-11 | 2022-02-02 | 2.8 | 3.25 | 2.77 | 2.9 | 0.005 | 0.96 | 0.0 | 0.12 | 20.39 | 0.01 | 2.048 | 11.73 | 0.84 | 3.2 | 96.8 | 0.0 | -2.64 | 0.89 | 0.89 | 3.27 | 2.9 | 0.004 | 0.87 | 0.0 | 0.05 | 18.15 | 0.00 | 2.112 | 14.24 | 2.05 | 2.8 | 97.2 | 0.0 | 0.41 | 0.50 | 0.90 | 0.90 | 3.52 | 16830 | 2040 | 32 | 0 | 27 | 2 | 0 | logfile |
✔ | 6UGH | 20764 | 2023-12-10 | 2019-09-26 | 3.4 | 3.33 | — | 3.4 | 0.009 | 0.90 | 0.0 | 0.05 | 13.45 | 0.01 | 2.024 | 3.43 | 0.13 | 3.3 | 96.4 | 0.3 | -2.50 | 0.53 | 0.74 | 2.98 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 15.39 | 0.00 | 2.030 | 8.04 | 0.40 | 3.9 | 96.0 | 0.1 | -0.76 | 1.10 | 0.54 | 0.77 | 2.51 | 13690 | 895 | 2 | 0 | 0 | 0 | 6716 | logfile |
✔ | 6RW5 | 10022 | 2023-12-14 | 2019-06-03 | 3.14 | 2.26 | 3.07 | 2.9 | 0.008 | 0.66 | 0.0 | 0.08 | 17.05 | 0.01 | 1.699 | 2.41 | 0.05 | 3.0 | 96.9 | 0.0 | -2.51 | 0.85 | 0.84 | 4.32 | 2.9 | 0.003 | 0.63 | 0.0 | 0.04 | 17.57 | 0.00 | 1.788 | 3.89 | 0.14 | 1.8 | 98.1 | 0.0 | 1.09 | 1.38 | 0.87 | 0.87 | 3.94 | 137051 | 6491 | 51 | 955 | 87 | 61 | 63716 | logfile |
✔ | 6U2K | 20621 | 2023-12-07 | 2019-08-20 | 2.93 | 3.31 | 3.29 | 3.3 | 0.010 | 0.99 | 0.0 | 0.06 | 10.37 | 0.01 | 2.354 | 3.34 | 0.19 | 9.7 | 90.3 | 0.0 | -4.70 | 0.70 | 0.83 | 4.65 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 15.09 | 0.00 | 2.227 | 6.57 | 2.51 | 7.9 | 92.1 | 0.0 | -1.90 | 1.20 | 0.64 | 0.80 | 2.83 | 4719 | 604 | 3 | 0 | 4 | 0 | 0 | logfile |
✔ | 8CPS | 16784 | 2023-12-16 | 2023-03-03 | 1.82 | 1.69 | 1.90 | 1.7 | 0.003 | 0.66 | 0.0 | 0.05 | 15.42 | 0.01 | 2.116 | 2.82 | 0.00 | 1.0 | 99.0 | 0.0 | 2.28 | 0.75 | 0.81 | 8.54 | 1.7 | 0.003 | 0.58 | 0.0 | 0.04 | 17.00 | 0.00 | 2.154 | 4.46 | 0.16 | 1.2 | 98.8 | 0.0 | 4.78 | 0.30 | 0.77 | 0.83 | 8.39 | 36034 | 4152 | 72 | 0 | 38 | 1916 | 0 | logfile |
✔ | 6TNY | 10539 | 2023-12-12 | 2019-12-10 | 3.08 | 3.41 | — | 3.1 | 0.009 | 1.10 | 2.0 | 0.06 | 17.68 | 0.01 | 1.826 | 7.98 | 0.83 | 6.4 | 93.2 | 0.3 | -3.49 | 0.83 | 0.76 | 2.04 | 3.1 | 0.003 | 0.67 | 0.0 | 0.04 | 18.14 | 0.00 | 2.134 | 8.52 | 0.19 | 5.2 | 94.8 | 0.0 | -0.62 | 0.76 | 0.86 | 0.81 | 1.91 | 19726 | 2399 | 10 | 50 | 3 | 0 | 0 | logfile |
✔ | 7NJX | 12426 | 2023-12-11 | 2021-02-17 | 4.32 | 4.37 | — | 4.1 | 0.003 | 0.52 | 0.0 | 0.04 | 14.39 | 0.00 | 2.028 | 13.09 | 0.00 | 5.8 | 94.2 | 0.0 | 1.56 | 0.60 | 0.76 | — | 4.2 | 0.003 | 0.55 | 0.0 | 0.04 | 14.31 | 0.00 | 1.943 | 13.76 | 0.00 | 3.1 | 96.9 | 0.0 | 3.90 | 0.50 | 0.60 | 0.76 | — | 16426 | 1118 | 12 | 0 | 0 | 0 | 8337 | logfile |
✔ | 7W1T | 32255 | 2023-12-11 | 2021-11-20 | 3.0 | 3.11 | — | 3.1 | 0.007 | 0.81 | 0.0 | 0.05 | 16.51 | 0.01 | 2.078 | 8.15 | 0.14 | 3.8 | 96.2 | 0.1 | 0.74 | 0.78 | 0.86 | 3.42 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 17.29 | 0.00 | 2.132 | 7.66 | 1.47 | 3.7 | 96.3 | 0.0 | 1.10 | 1.18 | 0.76 | 0.88 | 3.08 | 68014 | 8269 | 68 | 0 | 45 | 0 | 0 | logfile |
✔ | 8CPM | 16783 | 2023-12-16 | 2023-03-03 | 1.81 | 1.57 | 1.84 | 1.6 | 0.005 | 0.85 | 0.0 | 0.05 | 15.21 | 0.01 | 1.916 | 7.77 | 0.00 | 1.0 | 99.0 | 0.0 | 2.32 | 0.70 | 0.75 | 7.56 | 1.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.38 | 0.00 | 2.043 | 7.22 | 0.11 | 2.3 | 97.7 | 0.0 | 4.30 | 0.37 | 0.71 | 0.77 | 7.46 | 36090 | 4152 | 72 | 0 | 38 | 1972 | 0 | logfile |
✔ | 7TFo | 25878 | 2023-12-14 | 2022-01-06 | 4.1 | 3.83 | — | 3.8 | 0.006 | 0.74 | 0.0 | 0.05 | 13.33 | 0.01 | 2.118 | 16.68 | 0.21 | 8.9 | 91.1 | 0.0 | -1.50 | 0.74 | 0.73 | — | 3.7 | 0.004 | 0.67 | 0.0 | 0.05 | 13.46 | 0.00 | 2.114 | 14.02 | 0.00 | 7.8 | 92.1 | 0.0 | -1.06 | 0.71 | 0.74 | 0.76 | — | 17774 | 2283 | 20 | 0 | 21 | 0 | 0 | logfile |
✔ | 7S21 | 24815 | 2023-12-11 | 2021-09-02 | 3.4 | 3.86 | — | 3.8 | 0.006 | 0.78 | 0.0 | 0.04 | 15.50 | 0.01 | 0.827 | 18.73 | 0.00 | 14.6 | 85.4 | 0.0 | -2.41 | 0.72 | 0.84 | 3.42 | 3.8 | 0.005 | 0.74 | 0.0 | 0.04 | 17.59 | 0.00 | 2.254 | 10.79 | 0.90 | 12.3 | 87.7 | 0.0 | -1.07 | 0.50 | 0.74 | 0.86 | 2.76 | 122460 | 15900 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q6E | 13857 | 2023-12-16 | 2021-11-07 | 2.7 | 2.91 | — | 2.8 | 0.003 | 0.54 | 0.0 | 0.04 | 10.15 | 0.00 | 2.127 | 3.28 | 0.48 | 2.7 | 97.3 | 0.0 | 0.33 | 0.75 | 0.84 | 3.73 | 2.8 | 0.003 | 0.58 | 0.0 | 0.04 | 13.16 | 0.00 | 2.148 | 7.38 | 1.71 | 2.9 | 97.1 | 0.0 | 0.66 | 0.54 | 0.75 | 0.87 | 3.32 | 34341 | 4327 | 29 | 0 | 74 | 0 | 0 | logfile |
✔ | 6Voo | 21271 | 2023-12-14 | 2020-01-30 | 3.05 | 2.65 | — | 2.9 | 0.006 | 0.86 | 0.0 | 0.05 | 15.43 | 0.00 | 2.159 | 9.02 | 0.03 | 6.2 | 93.6 | 0.1 | -2.76 | 0.74 | 0.79 | 2.61 | 3.0 | 0.003 | 0.66 | 0.0 | 0.04 | 17.20 | 0.00 | 2.078 | 12.46 | 0.44 | 5.8 | 94.1 | 0.1 | -0.17 | 1.21 | 0.77 | 0.81 | 2.23 | 27551 | 3574 | 15 | 0 | 7 | 0 | 0 | logfile |
✔ | 7NJU | 12423 | 2023-12-11 | 2021-02-17 | 3.74 | 3.93 | — | 3.8 | 0.003 | 0.47 | 0.0 | 0.04 | 14.41 | 0.00 | 2.064 | 6.27 | 0.00 | 4.0 | 96.0 | 0.0 | 2.44 | 0.63 | 0.83 | 1.57 | 3.8 | 0.003 | 0.51 | 0.0 | 0.04 | 15.39 | 0.00 | 2.081 | 7.00 | 0.13 | 2.0 | 98.0 | 0.0 | 4.77 | 0.33 | 0.63 | 0.83 | 1.27 | 16438 | 1119 | 12 | 0 | 0 | 0 | 8341 | logfile |
✔ | 8CPX | 16789 | 2023-12-16 | 2023-03-03 | 1.76 | 1.61 | 1.78 | 1.6 | 0.005 | 0.80 | 0.0 | 0.06 | 14.97 | 0.01 | 2.063 | 5.37 | 0.00 | 1.0 | 99.0 | 0.0 | 2.18 | 0.75 | 0.81 | 8.02 | 1.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.88 | 0.00 | 2.212 | 2.81 | 1.31 | 1.8 | 98.2 | 0.0 | 4.58 | 0.39 | 0.78 | 0.85 | 7.90 | 35827 | 4152 | 72 | 0 | 38 | 1709 | 0 | logfile |
✔ | 7ZJL | 14750 | 2023-12-11 | 2022-04-11 | 2.6 | 2.76 | 2.80 | 2.7 | 0.012 | 1.76 | 11.0 | 0.09 | 12.92 | 0.01 | 2.495 | 0.07 | 0.48 | 4.0 | 95.9 | 0.0 | -0.24 | 0.68 | 0.69 | 3.58 | 2.7 | 0.004 | 0.63 | 0.0 | 0.04 | 15.06 | 0.00 | 1.912 | 4.57 | 1.22 | 3.2 | 96.8 | 0.0 | 0.04 | 0.88 | 0.76 | 0.80 | 3.18 | 69412 | 4551 | 9 | 0 | 0 | 0 | 34272 | logfile |
✔ | 7W0R | 32248 | 2023-12-11 | 2021-11-18 | 2.8 | 2.90 | — | 2.9 | 0.008 | 0.83 | 0.0 | 0.05 | 18.80 | 0.01 | 2.169 | 7.41 | 1.72 | 3.8 | 96.2 | 0.1 | 0.91 | 0.80 | 0.89 | 3.27 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 17.70 | 0.00 | 2.166 | 7.39 | 2.19 | 3.3 | 96.6 | 0.1 | 1.17 | 0.22 | 0.80 | 0.89 | 2.99 | 68233 | 8269 | 68 | 0 | 45 | 0 | 0 | logfile |
✔ | 8DL7 | 27498 | 2023-12-08 | 2022-07-07 | 2.7 | 3.86 | 2.72 | 3.3 | 0.005 | 0.84 | 3.0 | 0.05 | 16.50 | 0.00 | 2.238 | 7.20 | 2.90 | 4.5 | 95.3 | 0.2 | 1.47 | 0.75 | 0.84 | 2.18 | 3.3 | 0.004 | 0.80 | 2.0 | 0.04 | 15.97 | 0.00 | 2.164 | 5.62 | 2.05 | 3.5 | 96.4 | 0.1 | 1.84 | 0.29 | 0.76 | 0.85 | 2.35 | 6586 | 909 | 6 | 0 | 4 | 1 | 0 | logfile |
✔ | 6VoM | 21269 | 2023-12-14 | 2020-01-30 | 3.6 | 3.53 | — | 3.5 | 0.006 | 0.92 | 0.0 | 0.05 | 15.88 | 0.01 | 2.157 | 11.64 | 0.10 | 5.9 | 93.9 | 0.2 | -3.19 | 0.83 | 0.77 | 1.48 | 3.4 | 0.003 | 0.71 | 0.0 | 0.04 | 17.07 | 0.00 | 2.142 | 13.93 | 0.24 | 4.2 | 95.7 | 0.1 | 0.07 | 0.84 | 0.83 | 0.80 | 1.40 | 27492 | 3566 | 15 | 0 | 7 | 0 | 0 | logfile |