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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CAM | 16530 | 2023-12-14 | 2023-01-24 | 1.86 | 1.57 | 1.83 | 1.7 | 0.010 | 1.53 | 0.0 | 0.11 | 21.86 | 0.03 | 1.821 | 0.54 | 0.27 | 3.0 | 96.8 | 0.1 | -1.28 | 0.64 | 0.76 | 6.57 | 1.6 | 0.006 | 0.97 | 0.0 | 0.05 | 22.27 | 0.01 | 1.747 | 7.43 | 1.24 | 2.5 | 97.5 | 0.0 | -0.04 | 0.34 | 0.73 | 0.82 | 6.46 | 86648 | 2767 | 65 | 2724 | 322 | 6113 | 0 | logfile |
✔ | 7o6Q | 12740 | 2023-12-08 | 2021-04-12 | 1.88 | 2.21 | — | 1.9 | 0.010 | 0.71 | 0.0 | 0.05 | 12.80 | 0.01 | 2.115 | 4.83 | 1.25 | 3.2 | 96.8 | 0.0 | -1.61 | 0.88 | 0.85 | 7.59 | 1.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.51 | 0.00 | 2.189 | 4.70 | 1.63 | 0.8 | 99.2 | 0.0 | 3.42 | 0.36 | 0.90 | 0.90 | 6.06 | 7999 | 997 | 8 | 0 | 0 | 399 | 0 | logfile |
✔ | 7V66 | 31736 | 2023-12-15 | 2021-08-19 | 1.89 | 1.85 | — | 5.2 | 0.006 | 1.02 | 0.0 | 0.07 | 12.14 | 0.01 | 1.929 | 1.89 | 2.07 | 1.9 | 98.0 | 0.0 | 1.97 | 0.09 | 0.05 | 1.38 | 5.1 | 0.004 | 0.76 | 0.0 | 0.04 | 15.44 | 0.00 | 2.197 | 20.43 | 1.35 | 4.9 | 95.1 | 0.0 | 2.55 | 1.19 | 0.16 | 0.14 | -0.14 | 33216 | 4128 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VZ4 | 32220 | 2023-12-09 | 2021-11-15 | 1.89 | 1.72 | — | 1.9 | 0.010 | 1.17 | 0.0 | 0.08 | 28.81 | 0.00 | 2.167 | 2.63 | 0.97 | 1.6 | 98.4 | 0.0 | 0.11 | 0.75 | 0.82 | 7.08 | 1.9 | 0.005 | 0.67 | 0.0 | 0.04 | 28.11 | 0.00 | 2.314 | 4.18 | 0.32 | 0.8 | 99.2 | 0.0 | 2.92 | 0.78 | 0.77 | 0.86 | 7.59 | 11843 | 746 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 6ZGL | 11210 | 2023-12-10 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.00 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.52 | 0.0 | 0.04 | 15.83 | 0.00 | 2.114 | 4.28 | 0.93 | 0.9 | 99.1 | 0.0 | 3.77 | 0.76 | 0.75 | 0.83 | 7.09 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✔ | 8P6Y | 17511 | 2023-12-07 | 2023-05-30 | 1.9 | 1.73 | 1.95 | 1.9 | 0.005 | 0.60 | 0.0 | 0.04 | 17.03 | 0.00 | 2.148 | 3.62 | 0.36 | 1.0 | 98.9 | 0.2 | 1.99 | 0.68 | 0.84 | 6.33 | 1.9 | 0.003 | 0.61 | 0.0 | 0.04 | 17.07 | 0.00 | 2.132 | 4.41 | 1.26 | 1.5 | 98.4 | 0.2 | 1.70 | 0.21 | 0.68 | 0.85 | 6.44 | 5266 | 630 | 7 | 0 | 3 | 158 | 0 | logfile |
✔ | 7P6A | 13223 | 2023-12-07 | 2021-07-15 | 1.9 | 1.91 | 1.88 | 1.9 | 0.004 | 0.72 | 0.0 | 0.06 | 12.30 | 0.01 | 2.247 | 3.33 | 0.00 | 3.8 | 96.2 | 0.0 | -3.07 | 0.51 | 0.86 | 7.13 | 1.9 | 0.003 | 0.65 | 0.0 | 0.05 | 14.15 | 0.00 | 2.293 | 4.99 | 0.00 | 4.7 | 95.3 | 0.0 | -2.61 | 0.38 | 0.55 | 0.89 | 7.74 | 4166 | 540 | 10 | 0 | 0 | 76 | 0 | logfile |
✔ | 8P6V | 17508 | 2023-12-07 | 2023-05-30 | 1.9 | 1.76 | 1.97 | 1.9 | 0.005 | 0.62 | 0.0 | 0.04 | 16.30 | 0.00 | 2.221 | 5.67 | 1.26 | 1.8 | 98.1 | 0.2 | 1.53 | 0.64 | 0.77 | 5.52 | 1.9 | 0.004 | 0.63 | 0.0 | 0.04 | 16.87 | 0.00 | 2.112 | 6.45 | 2.17 | 1.6 | 98.2 | 0.2 | 1.22 | 0.75 | 0.65 | 0.78 | 5.55 | 5243 | 630 | 7 | 0 | 2 | 138 | 0 | logfile |
✔ | 8F0K | 28759 | 2023-12-09 | 2022-11-03 | 1.9 | 1.70 | 1.92 | 1.9 | 0.010 | 0.59 | 0.0 | 0.04 | 14.28 | 0.01 | 2.252 | 4.34 | 0.91 | 1.2 | 98.8 | 0.0 | -1.70 | 0.50 | 0.67 | 4.75 | 1.9 | 0.003 | 0.62 | 0.0 | 0.04 | 16.28 | 0.00 | 2.202 | 6.19 | 0.91 | 2.2 | 97.8 | 0.0 | 1.51 | 0.64 | 0.60 | 0.78 | 4.98 | 10553 | 1272 | 12 | 0 | 18 | 39 | 0 | logfile |
✔ | 7QEQ | 13937 | 2023-12-11 | 2021-12-03 | 1.9 | 2.38 | 1.89 | 2.1 | 0.005 | 0.87 | 0.0 | 0.04 | 12.39 | 0.00 | 2.181 | 2.19 | 1.18 | 1.1 | 98.9 | 0.0 | 1.60 | 0.82 | 0.90 | 4.56 | 2.1 | 0.003 | 0.58 | 0.0 | 0.04 | 14.10 | 0.00 | 2.251 | 2.71 | 1.18 | 1.8 | 98.2 | 0.0 | 3.93 | 0.99 | 0.82 | 0.92 | 4.12 | 19313 | 2268 | 36 | 0 | 60 | 305 | 0 | logfile |
✔ | 8oRM | 17129 | 2023-12-07 | 2023-04-14 | 1.9 | 1.83 | 1.88 | 1.9 | 0.004 | 0.58 | 0.0 | 0.04 | 16.75 | 0.00 | 2.236 | 3.99 | 0.90 | 1.6 | 98.2 | 0.2 | 1.88 | 0.70 | 0.81 | 5.96 | 1.9 | 0.008 | 0.82 | 0.0 | 0.05 | 16.78 | 0.01 | 2.122 | 6.33 | 1.44 | 1.3 | 98.5 | 0.2 | 0.97 | 0.19 | 0.71 | 0.83 | 5.85 | 5341 | 632 | 7 | 0 | 2 | 210 | 0 | logfile |
✔ | 8Q9F | 18279 | 2023-12-08 | 2023-08-20 | 1.91 | 1.89 | 1.88 | 1.9 | 0.011 | 1.78 | 0.0 | 0.09 | 10.30 | 0.01 | 2.515 | 0.00 | 0.00 | 0.2 | 99.8 | 0.0 | -2.15 | 0.31 | 0.73 | 7.64 | 1.9 | 0.004 | 0.67 | 0.0 | 0.05 | 16.12 | 0.00 | 2.225 | 4.39 | 0.28 | 2.7 | 97.3 | 0.0 | -2.12 | 1.84 | 0.44 | 0.86 | 7.15 | 6390 | 414 | 6 | 0 | 0 | 0 | 3258 | logfile |
✔ | 8CU8 | 26996 | 2023-12-16 | 2022-05-16 | 1.91 | 2.52 | 1.91 | 2.2 | 0.005 | 0.65 | 0.0 | 0.05 | 13.91 | 0.01 | 2.043 | 0.74 | 0.00 | 0.6 | 99.4 | 0.0 | 1.28 | 0.87 | 0.93 | 5.94 | 2.2 | 0.003 | 0.53 | 0.0 | 0.04 | 16.47 | 0.00 | 1.989 | 1.18 | 0.00 | 0.6 | 99.4 | 0.0 | 5.71 | 0.29 | 0.88 | 0.94 | 5.13 | 35271 | 4032 | 72 | 0 | 24 | 2271 | 0 | logfile |
✔ | 8E30 | 27852 | 2023-12-09 | 2022-08-16 | 1.91 | 2.70 | 2.42 | 2.5 | 0.006 | 0.58 | 0.0 | 0.04 | 22.65 | 0.02 | 1.967 | 2.02 | 0.64 | 5.3 | 94.5 | 0.2 | 0.82 | 0.74 | 0.91 | 5.44 | 2.5 | 0.005 | 0.65 | 0.0 | 0.05 | 22.47 | 0.01 | 1.965 | 3.42 | 1.59 | 5.8 | 94.0 | 0.3 | 0.37 | 1.18 | 0.73 | 0.91 | 5.73 | 115737 | 1179 | 11 | 3016 | 1 | 0 | 41820 | logfile |
✔ | 7QK5 | 14038 | 2023-12-09 | 2021-12-17 | 1.92 | 1.67 | 1.83 | 2.2 | 0.011 | 1.89 | 4.0 | 0.10 | 10.96 | 0.01 | 2.401 | 0.10 | 0.00 | 4.5 | 95.5 | 0.0 | -1.58 | 0.32 | 0.78 | 6.85 | 2.2 | 0.003 | 0.62 | 0.0 | 0.05 | 18.17 | 0.00 | 2.236 | 3.44 | 2.74 | 3.4 | 96.6 | 0.0 | -1.74 | 1.48 | 0.36 | 0.82 | 7.31 | 10485 | 666 | 18 | 0 | 36 | 0 | 5337 | logfile |
✔ | 8Q8C | 18250 | 2023-12-08 | 2023-08-18 | 1.92 | 1.98 | 1.90 | 2.0 | 0.011 | 1.66 | 0.0 | 0.08 | 10.69 | 0.01 | 2.505 | 0.00 | 0.27 | 1.2 | 98.8 | 0.0 | -1.44 | 0.21 | 0.65 | 7.52 | 1.9 | 0.004 | 0.59 | 0.0 | 0.05 | 16.37 | 0.00 | 2.146 | 1.97 | 0.54 | 1.7 | 98.3 | 0.0 | -1.10 | 1.98 | 0.39 | 0.90 | 7.85 | 6618 | 429 | 6 | 0 | 0 | 0 | 3372 | logfile |
✔ | 8CAN | 16531 | 2023-12-12 | 2023-01-24 | 1.93 | 1.75 | 1.93 | 1.9 | 0.002 | 0.40 | 0.0 | 0.04 | 9.00 | 0.00 | 2.041 | 2.66 | 0.16 | 0.9 | 99.1 | 0.0 | 1.63 | 0.70 | 0.81 | 6.33 | 1.9 | 0.002 | 0.51 | 0.0 | 0.04 | 14.12 | 0.00 | 1.910 | 2.81 | 0.64 | 1.1 | 98.9 | 0.0 | 1.36 | 1.90 | 0.74 | 0.85 | 6.43 | 71225 | 4104 | 21 | 0 | 27 | 3170 | 33930 | logfile |
✔ | 7N8o | 24239 | 2023-12-08 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.025 | 2.40 | 0.0 | 0.11 | 22.23 | 0.01 | 1.522 | 14.77 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.004 | 0.78 | 0.0 | 0.05 | 17.97 | 0.01 | 2.008 | 12.36 | 1.68 | 2.7 | 97.3 | 0.0 | 0.99 | 0.36 | 0.75 | 0.77 | 5.38 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✔ | 8F7K | 28906 | 2023-12-16 | 2022-11-18 | 1.94 | 2.95 | 2.02 | 2.5 | 0.005 | 0.68 | 0.0 | 0.05 | 12.07 | 0.02 | 2.237 | 3.21 | 1.39 | 1.4 | 98.6 | 0.0 | 1.42 | 0.81 | 0.78 | 5.11 | 2.5 | 0.002 | 0.50 | 0.0 | 0.04 | 13.85 | 0.00 | 2.137 | 2.80 | 0.54 | 2.3 | 97.7 | 0.0 | 1.83 | 0.52 | 0.79 | 0.90 | 4.60 | 95242 | 6048 | 42 | 0 | 14 | 0 | 47978 | logfile |
✔ | 7MBX | 23749 | 2023-12-08 | 2021-04-01 | 1.95 | 2.56 | 1.94 | 2.4 | 0.012 | 0.88 | 1.0 | 0.06 | 12.16 | 0.01 | 2.287 | 2.16 | 0.45 | 1.5 | 98.5 | 0.0 | -0.11 | 0.72 | 0.86 | 4.55 | 2.3 | 0.002 | 0.56 | 0.0 | 0.04 | 15.14 | 0.00 | 2.215 | 6.37 | 1.12 | 1.1 | 98.9 | 0.0 | 2.02 | 0.53 | 0.71 | 0.87 | 4.46 | 8433 | 1065 | 11 | 0 | 2 | 61 | 0 | logfile |