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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6UW9 | 20920 | 2023-07-09 | 2019-11-04 | 4.33 | 4.42 | — | 4.3 | 0.005 | 1.14 | 0.0 | 0.06 | 15.43 | 0.01 | 1.932 | 8.33 | 0.20 | 7.3 | 92.7 | 0.0 | -4.94 | 0.67 | 0.79 | — | 4.3 | 0.003 | 0.75 | 0.0 | 0.04 | 14.75 | 0.00 | 2.092 | 10.75 | 0.00 | 6.7 | 93.3 | 0.0 | -0.53 | 0.75 | 0.67 | 0.79 | — | 18924 | 2328 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B5C | 12025 | 2023-07-06 | 2020-12-03 | 3.7 | 3.81 | 3.61 | 3.8 | 0.005 | 0.86 | 0.0 | 0.05 | 15.21 | 0.01 | 2.239 | 7.43 | 0.78 | 5.9 | 94.1 | 0.0 | -3.64 | 0.62 | 0.77 | 1.51 | 3.8 | 0.004 | 0.72 | 0.0 | 0.04 | 16.46 | 0.01 | 2.097 | 11.63 | 0.55 | 6.2 | 93.8 | 0.0 | -0.41 | 0.66 | 0.62 | 0.77 | 1.34 | 11770 | 1436 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7RHX | 24470 | 2023-07-12 | 2021-07-19 | 3.23 | 3.49 | 3.31 | 3.4 | 0.004 | 0.79 | 0.0 | 0.05 | 20.49 | 0.01 | 2.289 | 1.05 | 0.00 | 2.0 | 98.0 | 0.0 | -0.38 | 0.75 | 0.84 | 2.43 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 21.99 | 0.00 | 2.124 | 3.10 | 0.00 | 2.9 | 97.1 | 0.0 | 1.42 | 1.07 | 0.76 | 0.87 | 1.58 | 25787 | 1288 | 8 | 168 | 0 | 0 | 12159 | logfile |
✔ | 7TAo | 25779 | 2023-07-10 | 2021-12-21 | 3.2 | 3.44 | — | 3.5 | 0.011 | 2.56 | 0.0 | 0.25 | 15.88 | 0.00 | 2.109 | 9.87 | 0.00 | 1.7 | 98.3 | 0.0 | 1.97 | 0.67 | 0.81 | 2.29 | 3.5 | 0.003 | 0.92 | 0.0 | 0.04 | 16.87 | 0.00 | 2.097 | 9.41 | 0.26 | 2.0 | 98.0 | 0.0 | 0.78 | 1.25 | 0.64 | 0.81 | 2.04 | 22497 | 2915 | 23 | 0 | 9 | 0 | 0 | logfile |
✘ | 7S9Z | 24942 | 2023-07-04 | 2021-09-21 | 4.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7274 | 890 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7SP7 | 25367 | 2023-07-04 | 2021-11-02 | 3.1 | 3.61 | — | 3.5 | 0.008 | 0.68 | 0.0 | 0.05 | 13.90 | 0.00 | 2.219 | 3.57 | 0.00 | 1.4 | 98.6 | 0.0 | 2.52 | 0.60 | 0.73 | 1.83 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 15.63 | 0.00 | 2.219 | 5.74 | 0.32 | 1.9 | 98.1 | 0.0 | 1.72 | 0.58 | 0.67 | 0.81 | 3.22 | 6052 | 739 | 4 | 1 | 4 | 0 | 0 | logfile |
✘ | 7WF7 | 32461 | 2023-07-04 | 2021-12-26 | 3.4 | 3.19 | — | 3.2 | 0.004 | 0.83 | 0.0 | 0.05 | 13.56 | 0.00 | 2.288 | 2.88 | 0.00 | 4.4 | 95.6 | 0.0 | -1.14 | 0.55 | 0.64 | 1.44 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8136 | 1034 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8DKU | 27491 | 2023-07-06 | 2022-07-06 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10644 | 1300 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 7URG | 26712 | 2023-07-04 | 2022-04-21 | 3.46 | 3.69 | 3.49 | 3.7 | 0.002 | 0.50 | 0.0 | 0.04 | 15.44 | 0.00 | 2.229 | 4.69 | 0.00 | 3.5 | 96.5 | 0.0 | 0.73 | 0.69 | 0.75 | 2.59 | 3.7 | 0.004 | 0.59 | 0.0 | 0.04 | 16.80 | 0.00 | 2.242 | 5.34 | 0.15 | 5.8 | 94.2 | 0.0 | -0.19 | 0.50 | 0.74 | 0.79 | 2.15 | 6260 | 802 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 5U0A | 8478 | 2023-07-13 | 2016-11-23 | 3.3 | 3.41 | — | 3.4 | 0.012 | 1.37 | 1.0 | 0.08 | 16.04 | 0.01 | 1.667 | 28.66 | 5.48 | 4.6 | 94.8 | 0.6 | -2.78 | 0.65 | 0.74 | 1.61 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 17.79 | 0.00 | 2.102 | 13.31 | 0.38 | 3.4 | 96.6 | 0.1 | 0.14 | 1.92 | 0.73 | 0.85 | 1.68 | 28923 | 3329 | 14 | 144 | 0 | 0 | 0 | logfile |
✘ | 6LHU | 0899 | 2023-07-11 | 2019-12-10 | 3.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23169 | 1518 | 2 | 0 | 0 | 0 | 11483 | logfile |
✔ | 7SJR | 25164 | 2023-07-07 | 2021-10-18 | 3.8 | 3.91 | — | 3.8 | 0.005 | 0.79 | 0.0 | 0.04 | 17.55 | 0.01 | 1.895 | 13.38 | 0.08 | 8.9 | 91.1 | 0.0 | -1.61 | 0.77 | 0.83 | 1.72 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 18.86 | 0.00 | 2.044 | 8.50 | 0.00 | 6.8 | 93.2 | 0.0 | -0.08 | 1.14 | 0.76 | 0.82 | 0.82 | 13696 | 1713 | 4 | 35 | 3 | 0 | 0 | logfile |
✔ | 7TTi | 26116 | 2023-07-04 | 2022-02-01 | 3.5 | 3.76 | — | 3.8 | 0.006 | 0.65 | 0.0 | 0.04 | 13.49 | 0.01 | 1.990 | 50.92 | 0.28 | 7.7 | 92.3 | 0.0 | 1.88 | 0.46 | 0.65 | 2.20 | 3.8 | 0.004 | 0.73 | 0.0 | 0.04 | 14.47 | 0.01 | 2.221 | 10.17 | 0.00 | 6.5 | 93.5 | 0.0 | 0.78 | 0.60 | 0.62 | 0.78 | 2.28 | 7670 | 1084 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 7LYC | 23592 | 2023-07-10 | 2021-03-06 | 2.94 | 3.08 | 2.92 | 3.1 | 0.006 | 0.65 | 0.0 | 0.04 | 25.88 | 0.00 | 1.314 | 6.99 | 0.10 | 2.2 | 97.8 | 0.0 | -0.02 | 0.73 | 0.82 | 3.48 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 26.48 | 0.00 | 2.203 | 7.90 | 0.79 | 2.9 | 97.1 | 0.0 | 1.58 | 0.28 | 0.72 | 0.81 | 3.21 | 15475 | 1188 | 12 | 293 | 0 | 0 | 0 | logfile |
✔ | 7UVT | 26816 | 2023-07-06 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 16.13 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.70 | 0.0 | 0.04 | 17.94 | 0.01 | 1.892 | 21.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.48 | 0.77 | 0.76 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 8HS3 | 34984 | 2023-07-04 | 2022-12-16 | 3.14 | 3.64 | 3.25 | 3.6 | 0.005 | 0.75 | 0.0 | 0.05 | 16.98 | 0.01 | 2.141 | 7.14 | 0.36 | 5.6 | 94.4 | 0.0 | -1.38 | 0.55 | 0.78 | 2.00 | 3.6 | 0.004 | 0.60 | 0.0 | 0.04 | 17.14 | 0.00 | 2.156 | 9.99 | 0.24 | 5.1 | 94.9 | 0.0 | -0.41 | 0.31 | 0.54 | 0.77 | 2.03 | 8258 | 1124 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 6WB0 | 21583 | 2023-07-04 | 2020-03-26 | 4.2 | 4.26 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 11.69 | 0.00 | 2.131 | 11.89 | 0.81 | 4.1 | 95.9 | 0.0 | -4.46 | 0.79 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8518 | 948 | 4 | 77 | 0 | 0 | 0 | logfile |
✔ | 7SK2 | 25170 | 2023-07-03 | 2021-10-19 | 3.82 | 4.03 | — | 3.9 | 0.007 | 1.22 | 0.0 | 0.06 | 13.60 | 0.01 | 2.235 | 8.03 | 0.00 | 4.7 | 95.3 | 0.0 | -2.59 | 0.49 | 0.69 | 1.11 | 3.9 | 0.003 | 0.83 | 0.0 | 0.04 | 16.15 | 0.00 | 2.138 | 18.38 | 0.94 | 5.3 | 94.7 | 0.0 | -0.55 | 0.53 | 0.50 | 0.69 | 1.30 | 4177 | 532 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7Y85 | 33681 | 2023-07-08 | 2022-06-22 | 2.73 | 3.04 | 2.87 | 3.0 | 0.004 | 0.57 | 0.0 | 0.04 | 18.77 | 0.00 | 1.940 | 15.62 | 3.87 | 2.3 | 97.7 | 0.0 | -0.05 | 0.55 | 0.75 | 2.97 | 3.0 | 0.005 | 0.60 | 0.0 | 0.04 | 19.03 | 0.00 | 1.935 | 16.15 | 4.30 | 2.4 | 97.6 | 0.0 | 0.11 | 0.32 | 0.59 | 0.78 | 2.93 | 16502 | 1884 | 5 | 59 | 5 | 0 | 0 | logfile |
✔ | 7WHR | 32509 | 2023-07-08 | 2021-12-31 | 3.4 | 4.06 | — | 4.0 | 0.003 | 0.60 | 0.0 | 0.05 | 13.11 | 0.00 | 2.190 | 10.13 | 0.00 | 7.4 | 92.6 | 0.0 | -2.33 | 0.66 | 0.74 | 2.21 | 4.0 | 0.002 | 0.65 | 0.0 | 0.05 | 15.04 | 0.00 | 2.235 | 10.83 | 0.11 | 6.9 | 93.0 | 0.1 | -2.70 | 0.36 | 0.63 | 0.70 | 1.70 | 16914 | 2184 | 6 | 0 | 0 | 0 | 0 | logfile |