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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7R6K | 24280 | 2023-07-10 | 2021-06-22 | 3.17 | 3.23 | 3.15 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 14.70 | 0.00 | 2.200 | 8.68 | 0.00 | 4.3 | 95.7 | 0.0 | 0.58 | 0.73 | 0.79 | 2.37 | 3.2 | 0.002 | 0.50 | 0.0 | 0.03 | 15.88 | 0.00 | 2.182 | 7.38 | 0.16 | 4.5 | 95.5 | 0.0 | 1.36 | 0.41 | 0.73 | 0.81 | 2.16 | 20543 | 2153 | 16 | 152 | 0 | 0 | 0 | logfile |
✔ | 6XHJ | 22187 | 2023-07-05 | 2020-06-18 | 3.62 | 4.10 | — | 4.0 | 0.014 | 1.38 | 18.0 | 0.08 | 13.47 | 0.01 | 2.225 | 3.12 | 0.00 | 3.5 | 96.5 | 0.0 | -2.59 | 0.61 | 0.53 | 0.86 | 4.0 | 0.002 | 0.63 | 0.0 | 0.04 | 15.79 | 0.00 | 2.079 | 4.93 | 0.20 | 1.4 | 98.6 | 0.0 | 0.51 | 2.45 | 0.75 | 0.75 | 1.05 | 60624 | 8514 | 18 | 0 | 36 | 0 | 0 | logfile |
✔ | 6WXL | 21961 | 2023-07-08 | 2020-05-11 | 2.76 | 2.33 | 2.78 | 2.9 | 0.005 | 0.71 | 0.0 | 0.05 | 14.13 | 0.01 | 2.281 | 2.90 | 0.16 | 3.2 | 96.8 | 0.0 | -3.74 | 0.63 | 0.77 | 3.57 | 2.9 | 0.002 | 0.55 | 0.0 | 0.04 | 16.83 | 0.00 | 2.130 | 6.10 | 1.53 | 2.4 | 97.6 | 0.0 | -0.91 | 1.10 | 0.68 | 0.81 | 3.39 | 17016 | 2175 | 18 | 0 | 9 | 0 | 0 | logfile |
✔ | 7S4J | 24828 | 2023-07-19 | 2021-09-09 | 2.16 | 2.44 | — | 2.5 | 0.009 | 1.07 | 1.0 | 0.05 | 19.63 | 0.00 | 1.948 | 13.88 | 4.30 | 5.2 | 94.3 | 0.5 | 0.65 | 0.75 | 0.84 | 4.80 | 2.4 | 0.002 | 0.59 | 0.0 | 0.04 | 17.26 | 0.00 | 1.987 | 9.16 | 2.70 | 4.5 | 95.3 | 0.2 | 0.80 | 0.36 | 0.77 | 0.90 | 4.57 | 22780 | 2577 | 27 | 0 | 63 | 304 | 0 | logfile |
✔ | 7oNU | 13002 | 2023-07-07 | 2021-05-26 | 3.0 | 3.11 | 2.88 | 3.1 | 0.005 | 0.58 | 0.0 | 0.04 | 13.96 | 0.01 | 1.890 | 4.49 | 0.07 | 2.4 | 97.6 | 0.0 | 0.53 | 0.74 | 0.81 | 4.05 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 16.21 | 0.00 | 2.061 | 5.61 | 0.97 | 1.7 | 98.3 | 0.0 | 1.46 | 0.40 | 0.76 | 0.88 | 3.23 | 15083 | 1763 | 12 | 66 | 6 | 0 | 0 | logfile |
✔ | 6ZFP | 11185 | 2023-07-13 | 2020-06-17 | 3.24 | 3.95 | 3.34 | 3.7 | 0.006 | 0.70 | 0.0 | 0.05 | 14.34 | 0.00 | 2.198 | 9.71 | 0.12 | 8.4 | 91.5 | 0.1 | -1.19 | 0.83 | 0.83 | 1.85 | 3.7 | 0.002 | 0.61 | 0.0 | 0.04 | 15.64 | 0.00 | 2.202 | 7.49 | 0.22 | 5.8 | 94.1 | 0.1 | 0.31 | 0.76 | 0.80 | 0.77 | 1.22 | 29385 | 3676 | 1 | 0 | 28 | 0 | 0 | logfile |
✔ | 8HRB | 34966 | 2023-07-17 | 2022-12-15 | 3.78 | 3.89 | 3.82 | 3.8 | 0.002 | 0.48 | 0.0 | 0.04 | 14.55 | 0.00 | 2.187 | 8.99 | 0.02 | 4.4 | 95.6 | 0.0 | -0.91 | 0.78 | 0.79 | 1.45 | 3.8 | 0.002 | 0.53 | 0.0 | 0.04 | 16.40 | 0.00 | 2.120 | 9.95 | 0.18 | 3.8 | 96.2 | 0.0 | 0.08 | 0.40 | 0.78 | 0.79 | 1.12 | 96352 | 11778 | 28 | 102 | 8 | 0 | 0 | logfile |
✔ | 6S6L | 10103 | 2023-07-06 | 2019-07-03 | 3.1 | 2.99 | 2.95 | 2.9 | 0.014 | 1.12 | 0.0 | 0.07 | 9.31 | 0.01 | 2.263 | 5.39 | 0.16 | 5.3 | 94.7 | 0.0 | -2.85 | 0.39 | 0.65 | 3.67 | 2.9 | 0.002 | 0.59 | 0.0 | 0.04 | 12.12 | 0.01 | 2.158 | 8.90 | 0.24 | 3.5 | 96.5 | 0.0 | -0.82 | 0.55 | 0.40 | 0.66 | 2.99 | 11587 | 1510 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SSV | 25414 | 2023-07-07 | 2021-11-11 | 3.39 | 3.66 | — | 3.6 | 0.018 | 1.72 | 20.0 | 0.11 | 14.84 | 0.01 | 2.215 | 4.74 | 6.26 | 6.6 | 93.4 | 0.0 | -3.22 | 0.64 | 0.81 | 2.90 | 3.7 | 0.002 | 0.61 | 0.0 | 0.04 | 15.24 | 0.00 | 2.239 | 5.42 | 0.00 | 3.9 | 96.1 | 0.1 | 0.91 | 1.10 | 0.66 | 0.85 | 1.83 | 13815 | 1874 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 7K8Y | 22735 | 2023-07-12 | 2020-09-27 | 4.4 | 5.34 | — | 4.4 | 0.003 | 0.55 | 0.0 | 0.05 | 10.63 | 0.00 | 1.137 | 21.70 | 0.04 | 2.8 | 97.0 | 0.3 | -2.11 | 0.80 | 0.77 | — | 4.4 | 0.002 | 0.60 | 0.0 | 0.04 | 11.27 | 0.00 | 2.109 | 12.37 | 0.00 | 3.6 | 96.2 | 0.1 | -0.32 | 1.11 | 0.81 | 0.81 | — | 25560 | 3242 | 8 | 0 | 23 | 0 | 0 | logfile |
✔ | 7SYX | 25544 | 2023-07-15 | 2021-11-25 | 3.7 | 3.14 | 3.72 | 3.1 | 0.003 | 0.78 | 0.0 | 0.04 | 15.49 | 0.01 | 2.127 | 4.27 | 0.00 | 4.6 | 95.4 | 0.0 | -2.35 | 0.55 | 0.69 | 1.39 | 3.1 | 0.002 | 0.53 | 0.0 | 0.03 | 16.37 | 0.00 | 1.880 | 9.68 | 0.47 | 5.1 | 94.9 | 0.0 | -0.84 | 1.41 | 0.56 | 0.71 | 1.43 | 86744 | 5622 | 41 | 1960 | 3 | 0 | 0 | logfile |
✔ | 7WRi | 32727 | 2023-07-04 | 2022-01-26 | 3.03 | 3.18 | — | 3.2 | 0.003 | 0.58 | 1.0 | 0.04 | 15.51 | 0.00 | 2.099 | 6.76 | 2.03 | 6.0 | 94.0 | 0.0 | -4.19 | 0.73 | 0.80 | 2.23 | 3.1 | 0.002 | 0.57 | 0.0 | 0.04 | 16.69 | 0.00 | 2.091 | 8.27 | 0.00 | 6.6 | 93.4 | 0.0 | -0.56 | 0.40 | 0.74 | 0.83 | 1.87 | 6431 | 790 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7UHC | 26512 | 2023-07-11 | 2022-03-26 | 3.1 | 3.68 | 3.18 | 3.5 | 0.010 | 1.33 | 0.0 | 0.08 | 9.98 | 0.00 | 2.551 | 0.55 | 0.31 | 2.6 | 97.3 | 0.1 | 0.29 | 0.79 | 0.80 | 4.24 | 3.5 | 0.002 | 0.55 | 0.0 | 0.04 | 12.87 | 0.00 | 2.172 | 3.26 | 0.05 | 1.9 | 98.1 | 0.0 | 1.33 | 0.56 | 0.75 | 0.80 | 3.90 | 23136 | 3192 | 21 | 0 | 60 | 0 | 0 | logfile |
✔ | 7LBY | 23267 | 2023-07-06 | 2021-01-09 | 4.2 | 4.35 | — | 4.3 | 0.003 | 0.78 | 0.0 | 0.05 | 12.33 | 0.00 | 2.148 | 4.15 | 0.00 | 6.2 | 92.5 | 1.3 | -0.24 | 0.56 | 0.69 | — | 4.3 | 0.002 | 0.65 | 0.0 | 0.04 | 11.98 | 0.00 | 2.125 | 6.81 | 0.00 | 6.5 | 93.1 | 0.4 | 0.24 | 0.60 | 0.57 | 0.71 | — | 8800 | 1418 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CVN | 27010 | 2023-07-03 | 2022-05-18 | 2.4 | 3.23 | 2.42 | 3.1 | 0.014 | 1.53 | 3.0 | 0.08 | 17.97 | 0.00 | 2.524 | 1.49 | 1.21 | 2.4 | 97.6 | 0.0 | 0.60 | 0.84 | 0.87 | 3.98 | 3.1 | 0.002 | 0.82 | 0.0 | 0.04 | 18.09 | 0.00 | 2.305 | 2.98 | 2.17 | 1.6 | 98.4 | 0.0 | 1.58 | 0.81 | 0.76 | 0.87 | 3.33 | 4054 | 512 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7E80 | 31006 | 2023-07-06 | 2021-02-28 | 3.67 | 4.02 | — | 3.9 | 0.003 | 0.50 | 4.0 | 0.04 | 10.46 | 0.00 | 2.066 | 8.31 | 1.97 | 4.4 | 95.6 | 0.0 | 0.97 | 0.74 | 0.84 | 1.76 | 3.9 | 0.002 | 0.63 | 0.0 | 0.04 | 13.63 | 0.00 | 2.096 | 10.56 | 0.23 | 3.9 | 96.1 | 0.0 | 0.89 | 0.46 | 0.73 | 0.84 | 1.58 | 114468 | 15296 | 77 | 0 | 75 | 0 | 0 | logfile |
✔ | 7VDA | 31912 | 2023-07-11 | 2021-09-06 | 2.26 | 2.04 | 2.42 | 2.1 | 0.003 | 0.53 | 0.0 | 0.04 | 17.67 | 0.00 | 2.142 | 7.99 | 2.20 | 2.6 | 97.4 | 0.0 | 1.67 | 0.66 | 0.82 | 4.06 | 2.0 | 0.002 | 0.54 | 0.0 | 0.04 | 18.07 | 0.00 | 2.051 | 8.99 | 2.60 | 2.1 | 97.9 | 0.0 | 1.12 | 0.41 | 0.66 | 0.84 | 4.19 | 23292 | 2976 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WAF | 32384 | 2023-07-11 | 2021-12-14 | 2.52 | 2.97 | 2.47 | 2.8 | 0.003 | 0.58 | 0.0 | 0.05 | 13.61 | 0.00 | 1.339 | 7.48 | 0.11 | 3.7 | 96.3 | 0.1 | 0.15 | 0.80 | 0.87 | 3.60 | 2.8 | 0.002 | 0.52 | 0.0 | 0.04 | 15.40 | 0.00 | 1.948 | 7.32 | 1.15 | 3.3 | 96.6 | 0.1 | 0.37 | 0.91 | 0.80 | 0.90 | 3.30 | 24842 | 3226 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 6XF6 | 22162 | 2023-07-11 | 2020-06-15 | 4.0 | 4.88 | 4.07 | 4.1 | 0.005 | 0.80 | 0.0 | 0.06 | 11.50 | 0.01 | 2.249 | 3.71 | 0.21 | 2.6 | 97.4 | 0.0 | 0.03 | 0.85 | 0.78 | — | 4.2 | 0.002 | 0.59 | 0.0 | 0.04 | 13.01 | 0.00 | 2.172 | 9.92 | 0.04 | 2.6 | 97.4 | 0.0 | 0.56 | 1.23 | 0.87 | 0.83 | — | 22938 | 2928 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 7QiY | 14003 | 2023-07-18 | 2021-12-16 | 2.58 | 2.55 | 2.47 | 2.5 | 0.008 | 0.74 | 0.0 | 0.04 | 13.02 | 0.02 | 1.714 | 1.92 | 0.00 | 1.5 | 98.5 | 0.0 | 0.57 | 0.80 | 0.88 | 4.88 | 2.5 | 0.002 | 0.67 | 0.0 | 0.04 | 15.03 | 0.01 | 1.759 | 4.34 | 0.87 | 1.8 | 98.2 | 0.0 | 1.58 | 0.59 | 0.80 | 0.90 | 4.50 | 43805 | 1730 | 31 | 491 | 41 | 225 | 19242 | logfile |