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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DR0 | 27667 | 2023-07-18 | 2022-07-20 | 2.42 | 3.22 | 2.49 | 3.0 | 0.008 | 0.56 | 0.0 | 0.04 | 17.77 | 0.00 | 2.058 | 3.70 | 1.04 | 1.4 | 98.6 | 0.0 | 2.09 | 0.87 | 0.85 | 3.77 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 17.83 | 0.00 | 1.904 | 4.24 | 1.60 | 2.0 | 98.0 | 0.0 | 1.92 | 1.77 | 0.80 | 0.86 | 3.70 | 42882 | 2608 | 15 | 41 | 8 | 0 | 21368 | logfile |
✔ | 6RJU | 4906 | 2023-07-03 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 7XU5 | 33459 | 2023-07-19 | 2022-05-18 | 3.1 | 3.44 | 2.94 | 3.2 | 0.008 | 0.76 | 0.0 | 0.05 | 13.78 | 0.00 | 2.104 | 2.92 | 0.00 | 3.9 | 96.1 | 0.0 | -1.17 | 0.84 | 0.82 | 2.48 | 3.2 | 0.004 | 0.50 | 0.0 | 0.04 | 14.22 | 0.00 | 1.969 | 5.79 | 0.16 | 4.1 | 95.9 | 0.0 | -0.51 | 0.33 | 0.85 | 0.85 | 2.11 | 44292 | 2814 | 12 | 0 | 45 | 0 | 21549 | logfile |
✔ | 7B1B | 11982 | 2023-07-06 | 2020-11-24 | 4.23 | 6.70 | 4.32 | 4.1 | 0.004 | 0.75 | 0.0 | 0.05 | 14.14 | 0.01 | 2.087 | 33.07 | 0.54 | 13.6 | 86.4 | 0.0 | -2.84 | 0.88 | 0.83 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.04 | 12.18 | 0.00 | 2.035 | 31.45 | 0.00 | 13.7 | 86.2 | 0.1 | -2.93 | 0.92 | 0.88 | 0.83 | — | 12870 | 1697 | 12 | 0 | 22 | 0 | 0 | logfile |
✔ | 7LiS | 23384 | 2023-07-11 | 2021-01-27 | 2.96 | 3.25 | — | 3.2 | 0.008 | 0.79 | 0.0 | 0.06 | 14.46 | 0.00 | 2.214 | 2.81 | 3.45 | 3.5 | 96.5 | 0.0 | 0.22 | 0.75 | 0.88 | 4.54 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 16.57 | 0.00 | 2.171 | 3.00 | 1.80 | 3.1 | 96.9 | 0.0 | 0.66 | 0.34 | 0.77 | 0.89 | 3.19 | 128880 | 15660 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 7TGX | 25888 | 2023-07-12 | 2022-01-09 | 3.2 | 3.90 | — | 3.6 | 0.005 | 0.68 | 0.0 | 0.05 | 13.59 | 0.00 | 1.948 | 7.60 | 0.25 | 6.6 | 93.4 | 0.0 | -2.14 | 0.85 | 0.86 | 3.04 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 14.77 | 0.00 | 2.154 | 5.21 | 0.14 | 4.5 | 95.5 | 0.0 | -0.54 | 0.41 | 0.85 | 0.88 | 2.36 | 25778 | 3244 | 10 | 0 | 32 | 0 | 0 | logfile |
✔ | 7WTV | 32802 | 2023-07-14 | 2022-02-05 | 3.5 | 3.24 | — | 3.1 | 0.005 | 0.84 | 0.0 | 0.05 | 15.89 | 0.01 | 2.111 | 5.70 | 0.02 | 4.1 | 95.9 | 0.0 | -2.58 | 0.74 | 0.67 | 2.10 | 3.1 | 0.005 | 0.68 | 0.0 | 0.04 | 16.52 | 0.00 | 2.057 | 11.80 | 0.17 | 4.3 | 95.7 | 0.0 | -0.26 | 1.17 | 0.75 | 0.70 | 1.88 | 84177 | 6353 | 37 | 1574 | 1 | 0 | 0 | logfile |
✔ | 6S6T | 10105 | 2023-07-04 | 2019-07-03 | 4.1 | 4.22 | 4.17 | 4.1 | 0.024 | 0.98 | 0.0 | 0.08 | 12.90 | 0.00 | 1.163 | 8.26 | 0.02 | 5.6 | 94.4 | 0.0 | -3.19 | 0.74 | 0.83 | — | 4.1 | 0.003 | 0.82 | 0.0 | 0.05 | 13.22 | 0.00 | 1.783 | 9.34 | 0.05 | 5.4 | 94.6 | 0.0 | -1.22 | 1.53 | 0.74 | 0.83 | — | 56543 | 7304 | 14 | 0 | 17 | 0 | 0 | logfile |
✔ | 7WTS | 32799 | 2023-07-05 | 2022-02-05 | 3.2 | 3.07 | — | 3.0 | 0.005 | 0.85 | 0.0 | 0.05 | 16.37 | 0.01 | 2.076 | 5.07 | 0.09 | 3.8 | 96.2 | 0.0 | -1.00 | 0.75 | 0.75 | 2.70 | 3.0 | 0.008 | 0.76 | 0.0 | 0.05 | 16.98 | 0.01 | 2.047 | 9.70 | 0.34 | 4.4 | 95.6 | 0.0 | 0.10 | 0.37 | 0.79 | 0.80 | 2.51 | 61945 | 3777 | 23 | 1481 | 0 | 0 | 0 | logfile |
✔ | 7WTU | 32801 | 2023-07-14 | 2022-02-05 | 3.0 | 2.94 | — | 2.8 | 0.006 | 0.90 | 0.0 | 0.05 | 15.76 | 0.01 | 1.590 | 5.93 | 0.86 | 4.3 | 95.6 | 0.0 | -1.34 | 0.70 | 0.65 | 2.51 | 2.9 | 0.005 | 0.74 | 0.0 | 0.04 | 16.78 | 0.01 | 1.508 | 11.75 | 2.05 | 4.6 | 95.3 | 0.0 | -0.24 | 1.16 | 0.74 | 0.70 | 2.24 | 81215 | 5957 | 35 | 1575 | 1 | 0 | 0 | logfile |
✔ | 7WTT | 32800 | 2023-07-14 | 2022-02-05 | 3.1 | 2.98 | — | 2.9 | 0.006 | 0.92 | 0.0 | 0.05 | 16.04 | 0.01 | 2.066 | 5.99 | 0.46 | 4.0 | 96.0 | 0.0 | -1.30 | 0.70 | 0.65 | 2.39 | 2.9 | 0.004 | 0.67 | 0.0 | 0.04 | 16.65 | 0.00 | 2.037 | 11.61 | 0.32 | 4.0 | 96.0 | 0.0 | -0.02 | 2.39 | 0.73 | 0.69 | 2.11 | 83677 | 6254 | 36 | 1575 | 1 | 0 | 0 | logfile |
✔ | 7YGB | 33814 | 2023-07-04 | 2022-07-11 | 2.62 | 3.15 | 2.70 | 2.9 | 0.007 | 0.52 | 0.0 | 0.03 | 14.46 | 0.00 | 2.079 | 13.50 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.84 | — | 2.9 | 0.007 | 0.63 | 0.0 | 0.04 | 14.92 | 0.00 | 1.835 | 13.73 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.90 | 0.91 | — | 8738 | 0 | 5 | 407 | 54 | 0 | 0 | logfile |
✔ | 7QEN | 13934 | 2023-07-09 | 2021-12-03 | 3.46 | 2.43 | 3.43 | 2.1 | 0.006 | 0.96 | 0.0 | 0.06 | 18.61 | 0.01 | 2.068 | 4.07 | 0.20 | 3.6 | 96.4 | 0.0 | -3.65 | 0.74 | 0.75 | 2.13 | 2.1 | 0.003 | 0.63 | 0.0 | 0.04 | 19.59 | 0.00 | 2.023 | 11.69 | 0.30 | 2.9 | 97.1 | 0.0 | 0.95 | 0.53 | 0.77 | 0.78 | 1.66 | 19205 | 2209 | 8 | 70 | 20 | 0 | 0 | logfile |
✔ | 7EB2 | 31049 | 2023-07-09 | 2021-03-08 | 3.5 | 3.43 | — | 3.4 | 0.007 | 0.76 | 0.0 | 0.11 | 11.74 | 0.00 | 2.092 | 7.56 | 0.00 | 3.6 | 96.4 | 0.0 | -1.24 | 0.79 | 0.74 | 1.53 | 3.4 | 0.004 | 0.98 | 0.0 | 0.06 | 15.41 | 0.00 | 2.024 | 17.79 | 1.04 | 3.5 | 96.5 | 0.0 | -0.29 | 1.08 | 0.81 | 0.76 | 1.33 | 18497 | 2337 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 6PM4 | 20386 | 2023-07-07 | 2019-07-01 | 4.0 | 5.19 | — | 4.0 | 0.007 | 0.96 | 0.0 | 0.05 | 10.22 | 0.01 | 2.236 | 7.62 | 0.00 | 9.9 | 90.1 | 0.0 | -4.33 | 0.76 | 0.85 | — | 3.8 | 0.003 | 0.84 | 0.0 | 0.04 | 12.96 | 0.00 | 2.171 | 18.81 | 0.27 | 6.3 | 93.7 | 0.0 | -1.27 | 1.21 | 0.77 | 0.85 | — | 14055 | 1735 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 7LRD | 23495 | 2023-07-07 | 2021-02-16 | 3.22 | 4.04 | 3.18 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 7.70 | 0.00 | 1.795 | 4.48 | 0.25 | 1.3 | 98.7 | 0.0 | 2.71 | 0.82 | 0.76 | 2.88 | 3.2 | 0.004 | 0.52 | 0.0 | 0.04 | 10.53 | 0.00 | 2.010 | 7.20 | 0.13 | 2.0 | 98.0 | 0.1 | 2.44 | 1.19 | 0.90 | 0.88 | 2.64 | 14346 | 1766 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8DK1 | 27480 | 2023-07-09 | 2022-07-01 | 2.95 | 3.68 | 3.03 | 3.4 | 0.002 | 0.42 | 0.0 | 0.04 | 9.97 | 0.00 | 2.294 | 2.83 | 1.44 | 3.3 | 96.7 | 0.0 | 2.11 | 0.85 | 0.90 | 2.51 | 3.4 | 0.002 | 0.51 | 0.0 | 0.04 | 12.85 | 0.00 | 2.260 | 3.98 | 1.49 | 3.6 | 96.4 | 0.0 | 2.59 | 0.62 | 0.85 | 0.90 | 2.22 | 19500 | 2446 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6T0R | 10357 | 2023-07-07 | 2019-10-03 | 2.82 | 2.90 | 2.91 | 2.9 | 0.005 | 0.66 | 0.0 | 0.05 | 13.99 | 0.01 | 2.279 | 4.08 | 4.99 | 3.5 | 96.5 | 0.0 | -2.98 | 0.69 | 0.85 | 3.55 | 2.9 | 0.003 | 0.52 | 0.0 | 0.04 | 16.53 | 0.00 | 2.056 | 7.55 | 2.66 | 2.9 | 97.1 | 0.0 | 0.68 | 1.03 | 0.69 | 0.86 | 2.96 | 14120 | 1690 | 7 | 20 | 0 | 31 | 0 | logfile |
✔ | 6T0S | 10358 | 2023-07-07 | 2019-10-03 | 3.04 | 3.11 | 3.10 | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 13.17 | 0.01 | 2.109 | 4.37 | 4.69 | 2.8 | 97.2 | 0.0 | -3.21 | 0.68 | 0.86 | 3.59 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 15.00 | 0.00 | 1.972 | 9.02 | 0.20 | 1.9 | 98.1 | 0.0 | 0.58 | 0.54 | 0.69 | 0.88 | 3.15 | 14651 | 1700 | 6 | 43 | 2 | 0 | 0 | logfile |
✔ | 7oF2 | 12867 | 2023-07-18 | 2021-05-04 | 2.7 | 3.20 | 2.66 | 2.9 | 0.003 | 0.54 | 0.0 | 0.04 | 14.75 | 0.01 | 1.840 | 4.36 | 0.01 | 3.1 | 96.9 | 0.0 | 1.20 | 0.89 | 0.89 | 3.76 | 3.0 | 0.006 | 0.70 | 0.0 | 0.04 | 16.58 | 0.01 | 1.814 | 11.25 | 1.76 | 3.2 | 96.8 | 0.0 | 0.92 | 0.58 | 0.88 | 0.90 | 3.51 | 101195 | 8560 | 64 | 1466 | 91 | 0 | 0 | logfile |