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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3J7Z | 6057 | 2023-07-15 | 2014-08-27 | 3.9 | 3.80 | — | 3.9 | 0.009 | 1.42 | 5.0 | 0.09 | 16.03 | 0.01 | 1.426 | 11.65 | 10.91 | 16.3 | 77.2 | 6.5 | -5.00 | 0.75 | 0.70 | 0.71 | 3.8 | 0.007 | 0.95 | 0.0 | 0.05 | 16.34 | 0.01 | 1.992 | 19.79 | 1.72 | 15.0 | 83.0 | 2.0 | -3.38 | 1.87 | 0.79 | 0.80 | 0.94 | 90700 | 3453 | 36 | 2975 | 1 | 0 | 0 | logfile |
✔ | 3J80 | 2764 | 2023-07-12 | 2014-08-28 | 3.75 | 3.87 | 3.84 | 3.8 | 0.007 | 1.36 | 43.0 | 0.11 | 22.30 | 0.01 | 1.747 | 9.35 | 13.53 | 12.2 | 83.2 | 4.6 | -2.33 | 0.79 | 0.86 | 0.90 | 3.7 | 0.005 | 0.82 | 0.0 | 0.04 | 20.63 | 0.01 | 1.756 | 24.11 | 1.08 | 12.0 | 86.5 | 1.5 | -1.98 | 1.63 | 0.78 | 0.82 | 0.81 | 77716 | 5039 | 41 | 1779 | 70 | 0 | 0 | logfile |
✔ | 4UY8 | 2773 | 2023-07-16 | 2014-08-29 | 3.8 | 4.07 | — | 4.1 | 0.010 | 1.50 | 8.0 | 0.07 | 15.49 | 0.01 | 0.879 | 12.34 | 11.16 | 16.3 | 76.9 | 6.8 | -5.04 | 0.53 | 0.64 | 0.36 | 4.0 | 0.003 | 0.59 | 0.0 | 0.03 | 17.01 | 0.00 | 1.696 | 54.58 | 0.93 | 13.2 | 84.5 | 2.3 | -3.45 | 1.60 | 0.58 | 0.80 | 1.11 | 92995 | 3468 | 47 | 3049 | 144 | 439 | 8 | logfile |
✔ | 3J81 | 2763 | 2023-07-14 | 2014-08-29 | 4.0 | 4.19 | — | 4.0 | 0.007 | 1.30 | 64.0 | 0.10 | 22.05 | 0.01 | 1.076 | 7.72 | 12.47 | 11.6 | 83.5 | 4.9 | -2.31 | 0.79 | 0.84 | — | 4.0 | 0.005 | 0.81 | 0.0 | 0.04 | 20.76 | 0.01 | 1.769 | 25.89 | 0.89 | 11.6 | 86.9 | 1.4 | -1.86 | 2.08 | 0.79 | 0.82 | — | 83760 | 5686 | 48 | 1876 | 84 | 0 | 0 | logfile |
✔ | 4V19 | 2787 | 2023-07-10 | 2014-09-25 | 3.4 | 3.44 | — | 3.4 | 0.009 | 1.32 | 0.0 | 0.05 | 20.28 | 0.05 | 1.860 | 9.75 | 6.97 | 3.8 | 96.1 | 0.1 | -2.85 | 0.76 | 0.88 | 2.04 | 3.4 | 0.003 | 1.00 | 0.0 | 0.04 | 19.43 | 0.01 | 1.122 | 8.45 | 0.58 | 3.5 | 96.5 | 0.1 | 0.02 | 1.52 | 0.76 | 0.87 | 2.12 | 69409 | 4361 | 42 | 1583 | 171 | 204 | 0 | logfile |
✔ | 4V1A | 2787 | 2023-07-15 | 2014-09-25 | 3.4 | 3.43 | — | 3.4 | 0.009 | 1.29 | 0.0 | 0.05 | 13.81 | 0.01 | 2.067 | 12.17 | 6.03 | 4.6 | 95.3 | 0.1 | -2.62 | 0.37 | 0.78 | 1.69 | 3.4 | 0.003 | 0.70 | 0.0 | 0.04 | 16.87 | 0.00 | 2.083 | 10.94 | 0.29 | 4.4 | 95.5 | 0.1 | 0.59 | 1.92 | 0.38 | 0.79 | 1.76 | 31917 | 3843 | 24 | 0 | 94 | 0 | 0 | logfile |
✔ | 4V1W | 2788 | 2023-07-15 | 2014-10-02 | 4.7 | 4.69 | — | 4.7 | 0.020 | 2.45 | 172.0 | 0.17 | 18.97 | 0.01 | 2.533 | 7.94 | 7.67 | 3.0 | 96.5 | 0.6 | -2.40 | 0.74 | 0.84 | — | 4.6 | 0.004 | 0.91 | 0.0 | 0.04 | 16.60 | 0.01 | 2.039 | 20.50 | 0.00 | 2.4 | 97.6 | 0.0 | 0.57 | 2.81 | 0.73 | 0.76 | — | 32736 | 4080 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 3J8H | 2807 | 2023-07-05 | 2014-10-26 | 3.8 | 3.95 | — | 3.8 | 0.006 | 1.31 | 4.0 | 0.05 | 10.89 | 0.01 | 1.488 | 33.49 | 2.47 | 5.3 | 92.8 | 1.9 | -2.06 | 0.65 | 0.64 | 1.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111160 | 12796 | 12 | 0 | 2276 | 0 | 0 | logfile |
✔ | 3J92 | 2832 | 2023-07-20 | 2014-12-02 | 3.6 | 3.74 | — | 3.7 | 0.010 | 1.59 | 52.0 | 0.11 | 21.53 | 0.01 | 1.186 | 15.75 | 18.87 | 11.1 | 85.7 | 3.2 | -3.22 | 0.79 | 0.74 | 0.42 | 3.7 | 0.004 | 0.75 | 0.0 | 0.04 | 18.76 | 0.01 | 1.122 | 15.15 | 0.52 | 7.2 | 92.3 | 0.4 | -1.51 | 1.12 | 0.86 | 0.86 | 1.69 | 146386 | 7246 | 65 | 4013 | 593 | 0 | 0 | logfile |
✔ | 3J94 | 6204 | 2023-07-10 | 2014-12-05 | 4.2 | 2.69 | — | 3.1 | 0.009 | 1.97 | 0.0 | 0.07 | 15.84 | 0.01 | 1.261 | 31.36 | 5.87 | 5.0 | 93.0 | 2.0 | 2.31 | 0.83 | 0.77 | — | 2.7 | 0.003 | 0.78 | 0.0 | 0.04 | 13.87 | 0.00 | 1.688 | 15.00 | 0.00 | 4.8 | 94.7 | 0.5 | 0.39 | 2.62 | 0.85 | 0.80 | — | 21509 | 2895 | 12 | 0 | 11 | 0 | 0 | logfile |
✔ | 3J9C | 6224 | 2023-07-11 | 2014-12-25 | 2.9 | 3.02 | — | 3.1 | 0.005 | 1.11 | 0.0 | 0.05 | 14.41 | 0.00 | 2.277 | 7.02 | 6.13 | 4.8 | 95.2 | 0.0 | -0.81 | 0.74 | 0.87 | 2.67 | 3.0 | 0.004 | 0.61 | 0.0 | 0.05 | 16.49 | 0.00 | 2.143 | 7.80 | 3.35 | 3.0 | 97.0 | 0.0 | 0.21 | 1.52 | 0.76 | 0.87 | 3.18 | 23296 | 2961 | 7 | 0 | 14 | 0 | 0 | logfile |
✔ | 3J9D | 6239 | 2023-07-04 | 2015-01-09 | 3.3 | 2.70 | — | 3.4 | 0.027 | 2.04 | 0.0 | 0.08 | 20.57 | 0.01 | 2.034 | 23.66 | 24.92 | 8.2 | 89.6 | 2.2 | -3.64 | 0.81 | 0.89 | 2.90 | 3.3 | 0.022 | 0.83 | 0.0 | 0.04 | 17.52 | 0.00 | 2.197 | 15.77 | 0.60 | 7.4 | 91.9 | 0.7 | -1.61 | 2.37 | 0.75 | 0.84 | 2.85 | 6086 | 746 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 3J9E | 6240 | 2023-07-03 | 2015-01-10 | 3.3 | 2.66 | — | 3.3 | 0.032 | 3.28 | 0.0 | 0.09 | 21.31 | 0.02 | 1.223 | 20.81 | 24.26 | 9.8 | 87.3 | 2.9 | -3.41 | 0.77 | 0.88 | 3.26 | 3.3 | 0.004 | 0.78 | 0.0 | 0.04 | 17.71 | 0.00 | 2.103 | 10.58 | 0.46 | 7.9 | 91.5 | 0.6 | 0.80 | 1.24 | 0.72 | 0.85 | 3.33 | 4098 | 520 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9J | 5778 | 2023-07-10 | 2015-02-02 | 3.275 | 3.52 | 3.19 | 3.6 | 0.015 | 1.08 | 0.0 | 0.09 | 9.35 | 0.01 | 2.266 | 2.70 | 0.00 | 3.3 | 94.5 | 2.2 | -0.65 | 0.53 | 0.57 | 2.57 | 3.5 | 0.004 | 0.66 | 0.0 | 0.04 | 15.76 | 0.00 | 1.889 | 14.38 | 0.17 | 6.8 | 92.7 | 0.5 | 2.20 | 3.87 | 0.59 | 0.77 | 1.93 | 21068 | 1260 | 4 | 0 | 0 | 0 | 10624 | logfile |
✔ | 3J9L | 2871 | 2023-07-05 | 2015-02-04 | 4.0 | 4.10 | — | 4.0 | 0.022 | 1.96 | 105.0 | 0.12 | 19.47 | 0.01 | 1.058 | 81.48 | 27.30 | 10.5 | 88.6 | 0.9 | -4.09 | 0.66 | 0.68 | — | 4.0 | 0.048 | 3.15 | 43.0 | 0.12 | 19.35 | 0.02 | 1.814 | 99.41 | 4.32 | 39.9 | 58.2 | 1.9 | -7.71 | 2.86 | 0.73 | 0.81 | — | 112951 | 8688 | 31 | 0 | 8320 | 0 | 0 | logfile |
✔ | 3J9K | 2870 | 2023-07-10 | 2015-02-04 | 4.1 | 4.22 | — | 4.1 | 0.022 | 2.13 | 128.0 | 0.13 | 20.83 | 0.01 | 1.058 | 99.51 | 29.75 | 12.8 | 86.2 | 1.0 | -3.18 | 0.68 | 0.68 | — | 4.1 | 0.003 | 0.77 | 0.0 | 0.04 | 13.66 | 0.00 | 2.071 | 16.76 | 0.01 | 5.4 | 94.5 | 0.2 | -1.08 | 1.15 | 0.69 | 0.70 | — | 126512 | 10352 | 48 | 0 | 8304 | 0 | 0 | logfile |
✔ | 3J9P | 6267 | 2023-07-08 | 2015-02-14 | 4.24 | 2.59 | — | 4.1 | 0.009 | 1.85 | 4.0 | 0.07 | 17.68 | 0.01 | 2.113 | 26.35 | 4.64 | 10.2 | 88.2 | 1.6 | -3.58 | 0.73 | 0.78 | — | 4.2 | 0.004 | 0.99 | 0.0 | 0.04 | 13.80 | 0.00 | 2.128 | 17.46 | 0.00 | 8.5 | 90.8 | 0.7 | -1.73 | 1.17 | 0.73 | 0.80 | — | 16952 | 2240 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9S | 6272 | 2023-07-05 | 2015-02-19 | 2.6 | 3.83 | — | 3.5 | 0.020 | 1.80 | 0.0 | 0.12 | 18.55 | 0.01 | 0.216 | 25.10 | 6.86 | 1.3 | 98.0 | 0.8 | 1.97 | 0.68 | 0.76 | 3.15 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 17.43 | 0.00 | 1.145 | 9.20 | 1.43 | 1.5 | 98.5 | 0.0 | 1.37 | 1.90 | 0.70 | 0.89 | 3.19 | 9813 | 1191 | 3 | 0 | 15 | 315 | 0 | logfile |
✔ | 5AJ3 | 2913 | 2023-07-07 | 2015-02-20 | 3.6 | 3.73 | — | 3.7 | 0.018 | 1.28 | 0.0 | 0.05 | 18.85 | 0.07 | 1.844 | 24.00 | 10.71 | 3.9 | 96.0 | 0.1 | -3.65 | 0.86 | 0.86 | 2.03 | 3.6 | 0.004 | 1.41 | 0.0 | 0.04 | 19.14 | 0.02 | 1.819 | 16.06 | 0.59 | 4.7 | 95.3 | 0.0 | 0.16 | 1.64 | 0.84 | 0.82 | 1.63 | 66363 | 4665 | 44 | 1102 | 1006 | 118 | 0 | logfile |
✔ | 3J9W | 6306 | 2023-07-13 | 2015-03-16 | 3.9 | 3.93 | — | 3.8 | 0.010 | 1.50 | 0.0 | 0.03 | 15.63 | 0.02 | 1.433 | 8.85 | 0.26 | 6.0 | 92.0 | 2.0 | -1.66 | 0.74 | 0.72 | 0.72 | 3.8 | 0.006 | 0.79 | 0.0 | 0.04 | 17.72 | 0.01 | 2.005 | 21.51 | 1.17 | 8.6 | 90.8 | 0.6 | -0.66 | 1.36 | 0.80 | 0.85 | 1.16 | 135425 | 5661 | 54 | 4675 | 0 | 0 | 0 | logfile |