The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6WYK | 21967 | 2023-07-03 | 2020-05-13 | 4.0 | 4.14 | — | 4.2 | 0.007 | 0.77 | 0.0 | 0.05 | 11.98 | 0.00 | 2.223 | 5.97 | 0.00 | 3.4 | 96.6 | 0.0 | -2.28 | 0.62 | 0.77 | — | 4.2 | 0.004 | 0.86 | 0.0 | 0.05 | 16.17 | 0.00 | 2.173 | 13.51 | 0.31 | 2.9 | 97.1 | 0.0 | 1.58 | 0.85 | 0.62 | 0.78 | — | 3083 | 415 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XUN | 33475 | 2023-07-03 | 2022-05-19 | 3.4 | 3.91 | 3.41 | 3.8 | 0.002 | 0.57 | 0.0 | 0.04 | 13.72 | 0.00 | 2.129 | 11.02 | 0.00 | 4.1 | 95.9 | 0.0 | -0.92 | 0.72 | 0.76 | 0.33 | 3.8 | 0.003 | 0.72 | 0.0 | 0.05 | 15.95 | 0.00 | 2.159 | 12.95 | 0.33 | 4.9 | 95.1 | 0.0 | -0.13 | 1.11 | 0.72 | 0.77 | 0.22 | 5591 | 741 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UWF | 20922 | 2023-07-03 | 2019-11-05 | 3.08 | 3.26 | — | 3.3 | 0.008 | 1.08 | 0.0 | 0.05 | 16.40 | 0.01 | 2.294 | 2.14 | 0.00 | 3.1 | 96.9 | 0.0 | -3.86 | 0.70 | 0.85 | 2.48 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 15.31 | 0.00 | 2.245 | 6.57 | 0.62 | 3.1 | 96.9 | 0.0 | 1.17 | 1.10 | 0.67 | 0.85 | 2.62 | 3178 | 417 | 1 | 0 | 2 | 0 | 0 | logfile |
✘ | 8HJ9 | 34835 | 2023-07-03 | 2022-11-22 | 3.12 | 3.29 | 3.00 | 3.2 | 0.004 | 0.65 | 0.0 | 0.04 | 15.54 | 0.00 | 2.234 | 10.94 | 0.00 | 2.7 | 97.3 | 0.0 | 1.80 | 0.43 | 0.76 | 3.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3274 | 416 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7LQ6 | 23482 | 2023-07-03 | 2021-02-13 | 3.28 | 4.07 | 3.16 | 3.5 | 0.005 | 0.76 | 0.0 | 0.05 | 15.77 | 0.00 | 1.549 | 9.45 | 1.41 | 5.5 | 94.4 | 0.2 | -4.83 | 0.90 | 0.85 | 3.36 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 16.25 | 0.00 | 2.131 | 7.09 | 0.18 | 3.9 | 96.1 | 0.0 | -0.06 | 1.00 | 0.91 | 0.87 | 1.76 | 5267 | 672 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HYP | 0309 | 2023-07-06 | 2018-10-22 | 4.4 | 4.53 | — | 4.4 | 0.003 | 0.72 | 0.0 | 0.05 | 8.72 | 0.00 | 1.943 | 1.67 | 0.34 | 7.3 | 92.2 | 0.4 | -5.99 | 0.75 | 0.69 | — | 4.4 | 0.004 | 0.79 | 0.0 | 0.04 | 8.88 | 0.00 | 1.995 | 5.56 | 0.00 | 13.4 | 86.3 | 0.2 | -1.62 | 0.63 | 0.77 | 0.75 | — | 12392 | 2082 | 1 | 0 | 192 | 0 | 0 | logfile |
✔ | 7K8A | 22724 | 2023-07-06 | 2020-09-26 | 3.65 | 3.57 | — | 3.7 | 0.004 | 0.92 | 1.0 | 0.05 | 13.38 | 0.01 | 2.226 | 16.09 | 0.17 | 6.4 | 93.6 | 0.0 | -1.30 | 0.40 | 0.55 | 0.67 | 3.7 | 0.003 | 0.78 | 0.0 | 0.04 | 15.86 | 0.01 | 2.225 | 15.74 | 0.34 | 4.6 | 95.3 | 0.1 | -0.56 | 0.46 | 0.42 | 0.55 | 0.22 | 5513 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5A22 | 6337 | 2023-07-15 | 2015-05-06 | 3.8 | 4.20 | — | 4.2 | 0.009 | 1.49 | 0.0 | 0.06 | 15.75 | 0.01 | 2.014 | 14.11 | 5.57 | 13.9 | 84.2 | 2.0 | -5.08 | 0.72 | 0.82 | 1.68 | 4.1 | 0.003 | 0.74 | 0.0 | 0.04 | 16.80 | 0.01 | 1.854 | 16.65 | 0.72 | 12.1 | 86.9 | 1.0 | -1.37 | 2.67 | 0.68 | 0.74 | 1.41 | 32187 | 2002 | 1 | 0 | 2 | 0 | 16110 | logfile |
✔ | 7K8D | 22728 | 2023-07-06 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.6 | 0.003 | 0.80 | 0.0 | 0.04 | 13.50 | 0.01 | 2.094 | 15.68 | 0.00 | 4.9 | 95.1 | 0.0 | 0.82 | 1.46 | 0.41 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7K10 | 22619 | 2023-07-05 | 2020-09-06 | 3.3 | 3.44 | — | 3.4 | 0.006 | 0.98 | 0.0 | 0.05 | 15.43 | 0.01 | 2.300 | 4.19 | 0.37 | 10.6 | 89.3 | 0.1 | -5.28 | 0.72 | 0.77 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10037 | 1259 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7A8P | 11679 | 2023-07-04 | 2020-08-30 | 3.5 | 3.61 | 3.44 | 3.6 | 0.004 | 0.53 | 0.0 | 0.03 | 16.10 | 0.00 | 2.165 | 2.86 | 0.63 | 2.2 | 97.8 | 0.0 | 0.97 | 0.73 | 0.78 | 1.97 | 3.5 | 0.004 | 0.60 | 0.0 | 0.04 | 16.93 | 0.00 | 2.005 | 9.28 | 0.13 | 2.0 | 98.0 | 0.0 | 2.26 | 0.49 | 0.74 | 0.80 | 2.04 | 7305 | 911 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6WYJ | 21966 | 2023-07-03 | 2020-05-13 | 3.7 | 3.74 | — | 3.8 | 0.010 | 0.64 | 0.0 | 0.05 | 12.33 | 0.00 | 2.268 | 5.08 | 0.00 | 5.3 | 94.7 | 0.0 | -4.80 | 0.59 | 0.78 | 4.37 | 3.8 | 0.003 | 0.59 | 0.0 | 0.04 | 14.52 | 0.00 | 2.333 | 5.74 | 0.00 | 1.8 | 98.2 | 0.0 | 2.16 | 0.60 | 0.63 | 0.80 | 1.47 | 2949 | 398 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X13 | 21987 | 2023-07-03 | 2020-05-18 | 3.66 | 3.77 | — | 3.8 | 0.007 | 1.04 | 1.0 | 0.05 | 16.27 | 0.01 | 2.340 | 4.80 | 0.31 | 6.5 | 93.5 | 0.0 | -3.73 | 0.64 | 0.84 | 1.86 | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 16.00 | 0.00 | 2.254 | 8.98 | 0.00 | 5.3 | 94.7 | 0.0 | 1.35 | 0.42 | 0.64 | 0.84 | 1.86 | 3136 | 417 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7K8B | 22725 | 2023-07-03 | 2020-09-26 | 2.94 | 2.86 | — | 3.1 | 0.005 | 0.83 | 2.0 | 0.05 | 14.13 | 0.01 | 2.214 | 14.30 | 0.68 | 5.5 | 94.5 | 0.0 | -0.97 | 0.41 | 0.61 | 1.17 | 3.1 | 0.005 | 0.89 | 0.0 | 0.05 | 17.17 | 0.01 | 2.075 | 18.75 | 5.07 | 6.4 | 93.6 | 0.0 | -0.82 | 1.19 | 0.42 | 0.65 | 0.86 | 5543 | 726 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VH3 | 31985 | 2023-07-06 | 2021-09-20 | 3.6 | 3.70 | — | 3.7 | 0.005 | 1.09 | 0.0 | 0.06 | 11.49 | 0.01 | 2.257 | 7.95 | 0.90 | 8.5 | 91.0 | 0.4 | -4.84 | 0.68 | 0.69 | 1.85 | 3.6 | 0.003 | 0.72 | 0.0 | 0.04 | 15.45 | 0.00 | 2.153 | 13.94 | 0.21 | 8.1 | 91.8 | 0.1 | -1.28 | 1.66 | 0.70 | 0.73 | 1.52 | 12749 | 1612 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FD5 | 29002 | 2023-07-03 | 2022-12-02 | 4.57 | 4.19 | — | 10.0 | 0.016 | 2.15 | 4.0 | 0.13 | 13.14 | 0.02 | 2.541 | 0.16 | 0.29 | 3.8 | 96.2 | 0.0 | -1.38 | 0.28 | 0.02 | — | 3.5 | 0.004 | 0.81 | 0.0 | 0.04 | 13.27 | 0.01 | 2.112 | 15.37 | 0.00 | 6.2 | 93.8 | 0.0 | -1.75 | 1.59 | 0.40 | 0.17 | — | 3214 | 419 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X12 | 21986 | 2023-07-03 | 2020-05-18 | 3.52 | 3.69 | — | 3.7 | 0.008 | 1.08 | 0.0 | 0.06 | 15.87 | 0.01 | 2.322 | 3.01 | 0.00 | 2.7 | 97.3 | 0.0 | -5.29 | 0.65 | 0.84 | 1.43 | 3.7 | 0.003 | 0.67 | 0.0 | 0.04 | 15.88 | 0.00 | 2.262 | 7.77 | 0.63 | 2.7 | 97.3 | 0.0 | 0.14 | 1.20 | 0.66 | 0.84 | 1.26 | 3059 | 407 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7MPE | 23932 | 2023-07-06 | 2021-05-04 | 3.2 | 3.91 | — | 3.8 | 0.005 | 0.69 | 0.0 | 0.04 | 14.10 | 0.00 | 2.174 | 14.62 | 0.00 | 6.9 | 93.1 | 0.0 | -2.52 | 0.62 | 0.77 | 2.09 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 15.96 | 0.00 | 2.092 | 11.91 | 0.41 | 5.5 | 94.5 | 0.0 | -0.53 | 1.11 | 0.61 | 0.76 | 1.30 | 11214 | 1428 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XJB | 22205 | 2023-07-05 | 2020-06-23 | 3.8 | 4.06 | — | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 13.11 | 0.00 | 2.165 | 9.70 | 0.00 | 8.6 | 91.4 | 0.0 | -3.06 | 0.88 | 0.82 | 1.76 | 3.9 | 0.004 | 0.64 | 0.0 | 0.04 | 15.19 | 0.00 | 2.043 | 13.87 | 0.19 | 7.8 | 92.2 | 0.0 | -1.33 | 1.82 | 0.88 | 0.85 | 2.02 | 10070 | 1277 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Si6 | 25138 | 2023-07-07 | 2021-10-12 | 3.32 | 3.28 | — | 3.3 | 0.003 | 1.22 | 0.0 | 0.04 | 13.58 | 0.00 | 2.044 | 4.51 | 0.00 | 1.4 | 98.6 | 0.0 | 2.88 | 0.46 | 0.77 | 1.67 | 3.3 | 0.003 | 0.85 | 0.0 | 0.04 | 14.76 | 0.00 | 1.919 | 4.22 | 0.41 | 1.7 | 98.3 | 0.0 | 2.52 | 0.39 | 0.52 | 0.82 | 1.82 | 13515 | 873 | 1 | 0 | 2 | 0 | 6910 | logfile |