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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZZ4 | 15034 | 2023-07-03 | 2022-05-25 | 2.63 | 3.04 | 2.56 | 2.2 | 0.008 | 1.05 | 0.0 | 0.05 | 17.04 | 0.00 | 2.035 | 5.21 | 0.27 | 3.3 | 96.7 | 0.0 | -0.79 | 0.86 | 0.84 | 4.14 | 2.2 | 0.003 | 0.54 | 0.0 | 0.04 | 17.07 | 0.00 | 1.948 | 10.15 | 1.59 | 3.7 | 96.3 | 0.0 | 0.70 | 0.28 | 0.87 | 0.85 | 3.99 | 3682 | 463 | 1 | 0 | 3 | 11 | 0 | logfile |
✔ | 7USB | 26731 | 2023-07-03 | 2022-04-23 | 3.1 | 3.28 | 3.18 | 3.3 | 0.013 | 1.72 | 0.0 | 0.11 | 10.69 | 0.01 | 2.590 | 1.61 | 1.39 | 5.5 | 94.5 | 0.0 | -0.28 | 0.59 | 0.76 | 5.40 | 3.3 | 0.005 | 0.80 | 0.0 | 0.05 | 13.73 | 0.00 | 2.361 | 5.78 | 0.69 | 5.5 | 94.5 | 0.0 | -1.74 | 0.61 | 0.61 | 0.84 | 5.05 | 1661 | 213 | 3 | 0 | 5 | 0 | 0 | logfile |
✔ | 6XJH | 22210 | 2023-07-04 | 2020-06-23 | 3.6 | 2.83 | — | 3.6 | 0.019 | 1.64 | 0.0 | 0.09 | 11.22 | 0.01 | 2.173 | 3.03 | 0.48 | 1.5 | 98.5 | 0.0 | 1.10 | 0.66 | 0.74 | 1.98 | 3.7 | 0.003 | 0.71 | 0.0 | 0.05 | 16.12 | 0.00 | 1.926 | 13.34 | 0.36 | 2.4 | 97.6 | 0.0 | 0.82 | 1.65 | 0.67 | 0.76 | 1.58 | 7596 | 940 | 6 | 0 | 4 | 0 | 0 | logfile |
✘ | 7o3C | 12703 | 2023-07-19 | 2021-04-01 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 48532 | 5967 | 51 | 0 | 41 | 0 | 0 | logfile |
✔ | 6oWT | 20217 | 2023-07-06 | 2019-05-10 | 3.8 | 4.08 | — | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 12.40 | 0.01 | 2.304 | 4.41 | 2.31 | 4.4 | 95.6 | 0.0 | -3.98 | 0.77 | 0.76 | 1.52 | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 15.26 | 0.00 | 2.103 | 13.27 | 0.27 | 5.2 | 94.8 | 0.0 | 0.31 | 0.68 | 0.78 | 0.77 | 0.91 | 11649 | 1575 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SRQ | 25401 | 2023-07-03 | 2021-11-08 | 2.7 | 2.17 | — | 1.9 | 0.008 | 0.80 | 0.0 | 0.05 | 13.54 | 0.01 | 2.296 | 8.67 | 1.50 | 2.8 | 97.2 | 0.0 | 0.29 | 0.70 | 0.72 | 4.55 | 2.7 | 0.004 | 0.76 | 0.0 | 0.04 | 15.44 | 0.00 | 2.264 | 8.93 | 3.50 | 3.2 | 96.8 | 0.0 | 0.20 | 0.48 | 0.72 | 0.77 | 3.78 | 1960 | 254 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7JV2 | 22491 | 2023-07-03 | 2020-08-20 | 3.5 | 3.49 | 3.41 | 3.7 | 0.015 | 1.39 | 0.0 | 0.08 | 11.43 | 0.01 | 2.587 | 0.00 | 1.32 | 3.6 | 96.4 | 0.0 | 0.82 | 0.69 | 0.74 | 3.48 | 3.7 | 0.004 | 0.72 | 0.0 | 0.04 | 14.90 | 0.00 | 2.223 | 14.03 | 0.44 | 5.5 | 94.5 | 0.0 | -0.83 | 1.27 | 0.71 | 0.77 | 3.76 | 2151 | 282 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i2i | 0331 | 2023-07-04 | 2018-11-01 | 3.6 | 3.72 | — | 3.7 | 0.009 | 1.17 | 0.0 | 0.06 | 12.38 | 0.01 | 2.019 | 7.46 | 0.28 | 7.1 | 92.9 | 0.0 | -5.22 | 0.74 | 0.74 | 2.16 | 3.7 | 0.004 | 0.74 | 0.0 | 0.05 | 15.73 | 0.00 | 1.880 | 15.21 | 0.69 | 5.1 | 94.9 | 0.0 | -1.91 | 0.88 | 0.76 | 0.75 | 1.76 | 6830 | 856 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 7XY1 | 33507 | 2023-07-06 | 2022-05-31 | 3.3 | 3.36 | — | 3.3 | 0.005 | 0.76 | 6.0 | 0.06 | 13.22 | 0.01 | 2.035 | 16.43 | 0.97 | 8.4 | 91.0 | 0.6 | -2.22 | 0.76 | 0.83 | 3.69 | 3.3 | 0.003 | 0.63 | 0.0 | 0.05 | 14.80 | 0.00 | 2.074 | 10.97 | 0.49 | 9.9 | 89.9 | 0.2 | -2.36 | 0.32 | 0.77 | 0.85 | 3.23 | 11550 | 1536 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WM0 | 32596 | 2023-07-03 | 2022-01-14 | 3.35 | 3.62 | — | 3.7 | 0.009 | 1.22 | 0.0 | 0.08 | 12.61 | 0.01 | 2.405 | 9.08 | 0.28 | 5.4 | 94.6 | 0.0 | -2.87 | 0.69 | 0.56 | 0.97 | 3.6 | 0.004 | 0.84 | 0.0 | 0.05 | 15.59 | 0.00 | 2.067 | 16.04 | 0.55 | 6.4 | 93.6 | 0.0 | -1.58 | 1.76 | 0.76 | 0.68 | 1.10 | 3376 | 432 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7Q6Z | 13860 | 2023-07-05 | 2021-11-09 | 3.59 | 3.59 | 3.63 | 3.6 | 0.008 | 0.69 | 0.0 | 0.04 | 14.66 | 0.00 | 1.945 | 7.30 | 0.00 | 4.8 | 95.2 | 0.0 | 1.64 | 0.56 | 0.72 | 2.00 | 3.7 | 0.003 | 0.52 | 0.0 | 0.04 | 15.38 | 0.00 | 1.978 | 8.11 | 0.39 | 4.2 | 95.8 | 0.0 | 1.87 | 0.41 | 0.56 | 0.71 | 1.68 | 9754 | 597 | 3 | 0 | 4 | 0 | 4784 | logfile |
✔ | 7CXR | 30495 | 2023-07-03 | 2020-09-02 | 3.4 | 3.32 | 3.43 | 3.7 | 0.007 | 0.87 | 1.0 | 0.06 | 16.56 | 0.00 | 2.199 | 12.99 | 3.39 | 6.6 | 93.1 | 0.3 | -2.27 | 0.52 | 0.54 | 1.33 | 3.6 | 0.003 | 0.75 | 0.0 | 0.04 | 18.18 | 0.00 | 2.283 | 11.73 | 0.00 | 4.1 | 95.9 | 0.0 | 1.92 | 1.57 | 0.59 | 0.62 | 1.16 | 5168 | 614 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XQo | 22291 | 2023-07-03 | 2020-07-09 | 3.1 | 3.54 | — | 3.5 | 0.004 | 0.57 | 0.0 | 0.04 | 15.61 | 0.00 | 1.956 | 9.56 | 3.52 | 4.4 | 95.6 | 0.0 | -2.83 | 0.76 | 0.75 | 2.70 | 3.5 | 0.004 | 0.65 | 0.0 | 0.04 | 16.64 | 0.00 | 2.162 | 11.50 | 0.70 | 2.6 | 97.4 | 0.0 | 0.54 | 1.26 | 0.78 | 0.78 | 1.48 | 4301 | 560 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7X1R | 32947 | 2023-07-04 | 2022-02-24 | 3.9 | 3.98 | — | 3.9 | 0.007 | 0.75 | 0.0 | 0.05 | 14.08 | 0.00 | 2.205 | 9.01 | 0.25 | 2.3 | 97.7 | 0.0 | -0.91 | 0.74 | 0.82 | 1.82 | 4.0 | 0.004 | 0.66 | 0.0 | 0.05 | 16.50 | 0.00 | 2.266 | 11.91 | 0.63 | 3.3 | 96.7 | 0.0 | 0.39 | 1.77 | 0.74 | 0.82 | 1.48 | 7608 | 970 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7BoX | 30135 | 2023-07-09 | 2020-03-20 | 3.8 | 3.29 | — | 3.8 | 0.012 | 1.46 | 5.0 | 0.07 | 12.93 | 0.01 | 2.236 | 9.53 | 0.05 | 8.1 | 91.5 | 0.5 | -4.94 | 0.78 | 0.81 | 2.90 | 3.7 | 0.003 | 0.73 | 0.0 | 0.04 | 17.01 | 0.00 | 2.158 | 11.25 | 0.60 | 7.4 | 92.6 | 0.0 | -0.63 | 1.06 | 0.80 | 0.84 | 2.34 | 18618 | 2334 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WLC | 32581 | 2023-07-03 | 2022-01-13 | 4.0 | 4.24 | — | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 13.71 | 0.00 | 2.198 | 15.62 | 0.00 | 6.1 | 93.9 | 0.0 | -1.35 | 0.71 | 0.77 | — | 4.2 | 0.004 | 0.80 | 0.0 | 0.05 | 16.00 | 0.00 | 2.188 | 18.56 | 0.56 | 8.3 | 91.7 | 0.0 | -1.72 | 0.54 | 0.72 | 0.78 | — | 3307 | 430 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZZU | 11587 | 2023-07-05 | 2020-08-05 | 3.5 | 2.41 | 3.59 | 3.1 | 0.005 | 0.96 | 0.0 | 0.05 | 16.19 | 0.01 | 2.125 | 10.37 | 0.17 | 4.9 | 95.1 | 0.0 | -4.89 | 0.79 | 0.78 | 3.19 | 3.0 | 0.004 | 0.88 | 0.0 | 0.05 | 17.50 | 0.00 | 2.139 | 25.67 | 0.26 | 5.3 | 94.7 | 0.0 | -1.05 | 0.72 | 0.80 | 0.78 | 1.85 | 10760 | 1340 | 12 | 0 | 4 | 4 | 0 | logfile |
✔ | 7R7N | 24299 | 2023-07-03 | 2021-06-25 | 3.95 | 4.08 | 3.93 | 4.1 | 0.010 | 1.24 | 0.0 | 0.07 | 9.48 | 0.00 | 2.553 | 0.78 | 0.45 | 3.2 | 96.8 | 0.0 | 0.00 | 0.81 | 0.77 | 3.23 | 4.0 | 0.004 | 0.75 | 0.0 | 0.05 | 14.46 | 0.00 | 2.255 | 8.72 | 0.45 | 5.6 | 94.4 | 0.0 | -1.27 | 1.32 | 0.83 | 0.80 | 2.47 | 2790 | 391 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 6UJC | 20796 | 2023-07-05 | 2019-10-02 | 3.56 | 3.89 | — | 3.9 | 0.014 | 1.40 | 0.0 | 0.09 | 10.61 | 0.01 | 1.792 | 0.44 | 0.11 | 3.0 | 97.0 | 0.0 | 0.47 | 0.72 | 0.75 | 2.35 | 3.9 | 0.004 | 0.68 | 0.0 | 0.04 | 13.44 | 0.00 | 1.978 | 8.12 | 0.21 | 4.9 | 95.1 | 0.0 | -0.22 | 0.75 | 0.75 | 0.79 | 2.12 | 9209 | 1184 | 11 | 0 | 23 | 0 | 0 | logfile |
✔ | 7ZZ5 | 15035 | 2023-07-03 | 2022-05-25 | 2.43 | 2.83 | 2.33 | 2.1 | 0.008 | 1.04 | 0.0 | 0.05 | 17.33 | 0.01 | 2.256 | 4.98 | 1.86 | 3.3 | 96.7 | 0.0 | -1.00 | 0.89 | 0.88 | 3.98 | 2.1 | 0.004 | 0.58 | 0.0 | 0.04 | 17.12 | 0.00 | 2.183 | 9.12 | 1.60 | 3.3 | 96.7 | 0.0 | 0.44 | 0.32 | 0.89 | 0.89 | 3.82 | 3633 | 461 | 1 | 0 | 2 | 0 | 0 | logfile |