The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PT7 | 13620 | 2023-07-08 | 2021-09-26 | 3.8 | 3.34 | — | 3.4 | 0.007 | 0.74 | 4.0 | 0.05 | 14.97 | 0.00 | 1.865 | 11.56 | 0.64 | 3.3 | 96.7 | 0.0 | 0.56 | 0.76 | 0.80 | 1.56 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 15.85 | 0.00 | 0.924 | 10.95 | 0.25 | 3.0 | 97.0 | 0.0 | 0.73 | 0.31 | 0.77 | 0.82 | 1.43 | 67420 | 8451 | 29 | 0 | 50 | 0 | 0 | logfile |
✔ | 7T22 | 25609 | 2023-07-11 | 2021-12-02 | 4.2 | 4.73 | — | 4.4 | 0.004 | 1.41 | 0.0 | 0.04 | 10.32 | 0.00 | 1.992 | 5.52 | 1.18 | 1.5 | 98.5 | 0.0 | 2.51 | 0.83 | 0.75 | — | 4.4 | 0.004 | 1.08 | 0.0 | 0.04 | 12.24 | 0.00 | 0.943 | 23.53 | 0.00 | 3.4 | 96.6 | 0.0 | 0.80 | 0.90 | 0.85 | 0.79 | — | 24536 | 3084 | 15 | 13 | 15 | 0 | 0 | logfile |
✔ | 8BJQ | 16090 | 2023-07-16 | 2022-11-05 | 3.8 | 4.31 | 3.77 | 3.7 | 0.005 | 0.69 | 1.0 | 0.04 | 15.16 | 0.01 | 1.017 | 13.25 | 0.16 | 4.4 | 95.4 | 0.2 | -0.16 | 0.72 | 0.78 | 0.75 | 3.7 | 0.005 | 0.73 | 0.0 | 0.04 | 16.68 | 0.01 | 0.949 | 22.48 | 0.74 | 6.6 | 93.3 | 0.1 | -0.70 | 1.67 | 0.74 | 0.85 | 0.89 | 141384 | 8086 | 64 | 3580 | 211 | 0 | 0 | logfile |
✔ | 5GAG | 8003 | 2023-07-16 | 2015-11-26 | 3.8 | 3.95 | — | 3.8 | 0.007 | 1.04 | 1.0 | 0.05 | 15.71 | 0.00 | 1.789 | 8.16 | 9.03 | 3.0 | 96.9 | 0.1 | -3.35 | 0.79 | 0.90 | 1.98 | 3.8 | 0.006 | 0.73 | 0.0 | 0.04 | 15.46 | 0.01 | 0.954 | 17.90 | 1.07 | 4.6 | 95.2 | 0.1 | -0.85 | 0.69 | 0.78 | 0.88 | 2.01 | 94030 | 3598 | 46 | 3049 | 473 | 0 | 0 | logfile |
✔ | 6GEJ | 4395 | 2023-07-19 | 2018-04-26 | 3.6 | 3.77 | — | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 18.57 | 0.00 | 1.491 | 9.10 | 3.93 | 4.6 | 95.4 | 0.0 | -2.70 | 0.82 | 0.77 | 0.98 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 20.50 | 0.00 | 0.957 | 10.41 | 0.30 | 4.2 | 95.8 | 0.0 | 0.05 | 0.83 | 0.83 | 0.79 | 0.96 | 43702 | 4683 | 29 | 308 | 151 | 0 | 0 | logfile |
✔ | 8A1T | 15088 | 2023-07-14 | 2022-06-02 | 3.37 | 2.93 | 3.53 | 3.1 | 0.004 | 0.52 | 0.0 | 0.04 | 15.83 | 0.00 | 2.002 | 4.51 | 0.00 | 2.2 | 97.8 | 0.0 | 1.51 | 0.58 | 0.77 | 2.16 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 16.44 | 0.00 | 0.962 | 8.76 | 0.00 | 3.5 | 96.5 | 0.0 | 0.65 | 0.50 | 0.59 | 0.78 | 1.83 | 29507 | 1889 | 11 | 0 | 14 | 0 | 14626 | logfile |
✔ | 7Qo1 | 14080 | 2023-07-07 | 2021-12-23 | 4.4 | 3.65 | 4.44 | 3.5 | 0.012 | 1.85 | 2.0 | 0.09 | 18.30 | 0.02 | 2.337 | 2.24 | 1.51 | 5.3 | 94.6 | 0.2 | -1.82 | 0.79 | 0.60 | — | 3.5 | 0.003 | 0.75 | 0.0 | 0.04 | 17.66 | 0.00 | 0.966 | 16.68 | 0.00 | 5.3 | 94.7 | 0.0 | -1.30 | 0.73 | 0.80 | 0.60 | — | 14179 | 1694 | 9 | 62 | 1 | 0 | 0 | logfile |
✔ | 6i0Y | 0322 | 2023-07-16 | 2018-10-26 | 3.2 | 4.80 | — | 4.7 | 0.010 | 1.49 | 8.0 | 0.07 | 15.55 | 0.01 | 0.682 | 13.02 | 11.41 | 16.0 | 77.5 | 6.5 | -5.00 | 0.59 | 0.58 | 0.26 | 4.7 | 0.007 | 0.91 | 0.0 | 0.04 | 16.58 | 0.01 | 0.967 | 25.22 | 1.81 | 15.5 | 82.6 | 1.9 | -3.22 | 1.65 | 0.61 | 0.74 | 0.89 | 93619 | 3551 | 48 | 3049 | 144 | 439 | 0 | logfile |
✔ | 5LMo | 4074 | 2023-07-04 | 2016-08-01 | 4.3 | 4.71 | 4.30 | 4.3 | 0.009 | 1.47 | 50.0 | 0.12 | 20.86 | 0.01 | 0.865 | 18.49 | 20.40 | 10.6 | 85.8 | 3.6 | -2.76 | 0.80 | 0.69 | — | 4.3 | 0.005 | 0.76 | 0.0 | 0.04 | 16.78 | 0.01 | 0.968 | 35.61 | 0.00 | 9.3 | 90.2 | 0.5 | -1.75 | 2.17 | 0.87 | 0.84 | — | 54110 | 2622 | 29 | 1533 | 110 | 0 | 0 | logfile |
✔ | 8H77 | 34519 | 2023-07-08 | 2022-10-19 | 3.2 | 2.74 | 3.17 | 3.1 | 0.005 | 0.84 | 0.0 | 0.05 | 15.36 | 0.00 | 1.365 | 13.60 | 0.12 | 5.1 | 94.9 | 0.0 | -1.57 | 0.59 | 0.67 | 2.51 | 3.1 | 0.004 | 0.66 | 0.0 | 0.04 | 17.53 | 0.00 | 0.978 | 10.16 | 0.29 | 4.2 | 95.8 | 0.0 | -0.93 | 0.69 | 0.69 | 0.77 | 2.13 | 15726 | 1930 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7UiM | 26549 | 2023-07-07 | 2022-03-29 | 3.1 | 4.12 | 3.81 | 3.6 | 0.005 | 0.87 | 0.0 | 0.04 | 18.46 | 0.01 | 1.903 | 9.02 | 0.00 | 3.7 | 96.3 | 0.0 | -1.28 | 0.67 | 0.47 | 0.98 | 3.6 | 0.006 | 0.82 | 0.0 | 0.04 | 19.55 | 0.01 | 0.997 | 36.04 | 1.47 | 6.3 | 93.4 | 0.3 | -0.97 | 2.81 | 0.79 | 0.76 | 0.73 | 14772 | 387 | 3 | 541 | 15 | 0 | 0 | logfile |
✔ | 6TD5 | 10463 | 2023-07-20 | 2019-11-07 | 3.2 | 3.25 | 3.20 | 3.2 | 0.006 | 0.97 | 0.0 | 0.05 | 10.05 | 0.01 | 2.109 | 4.65 | 0.15 | 4.4 | 95.6 | 0.0 | -4.67 | 0.75 | 0.83 | 3.66 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 15.70 | 0.00 | 0.997 | 8.52 | 0.42 | 3.7 | 96.3 | 0.0 | -0.32 | 1.16 | 0.78 | 0.87 | 2.84 | 49408 | 6360 | 34 | 0 | 8 | 0 | 0 | logfile |
✔ | 7TRG | 26089 | 2023-07-15 | 2022-01-28 | 3.0 | 3.44 | — | 3.3 | 0.005 | 0.68 | 1.0 | 0.04 | 15.52 | 0.00 | 1.932 | 4.57 | 0.19 | 3.8 | 96.2 | 0.0 | 1.26 | 0.64 | 0.86 | 2.32 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 16.31 | 0.00 | 1.010 | 4.53 | 1.26 | 4.0 | 96.0 | 0.0 | 0.81 | 1.14 | 0.63 | 0.87 | 2.05 | 33714 | 4377 | 25 | 0 | 24 | 8 | 0 | logfile |
✔ | 6TZ1 | 20586 | 2023-07-07 | 2019-08-09 | 3.4 | 3.44 | — | 3.4 | 0.008 | 0.92 | 0.0 | 0.05 | 10.16 | 0.01 | 2.207 | 4.35 | 0.47 | 5.1 | 94.9 | 0.0 | -3.92 | 0.54 | 0.85 | 3.95 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 14.53 | 0.00 | 1.013 | 6.52 | 0.47 | 3.8 | 96.2 | 0.0 | -0.27 | 1.25 | 0.53 | 0.87 | 3.17 | 14212 | 1709 | 5 | 23 | 1 | 0 | 0 | logfile |
✔ | 7Y41 | 33599 | 2023-07-17 | 2022-06-13 | 4.1 | 4.02 | 3.07 | 3.4 | 0.004 | 0.63 | 0.0 | 0.03 | 16.59 | 0.01 | 1.204 | 15.20 | 0.00 | 4.4 | 95.6 | 0.0 | -0.39 | 0.87 | 0.86 | — | 3.4 | 0.006 | 0.67 | 0.0 | 0.04 | 16.41 | 0.01 | 1.015 | 16.01 | 0.04 | 5.5 | 94.5 | 0.0 | -0.69 | 1.48 | 0.87 | 0.87 | — | 97056 | 3529 | 46 | 3237 | 411 | 0 | 0 | logfile |
✔ | 5T62 | 8362 | 2023-07-11 | 2016-09-01 | 3.3 | 3.38 | — | 3.4 | 0.007 | 1.13 | 5.0 | 0.09 | 17.39 | 0.01 | 1.390 | 1.88 | 6.32 | 8.1 | 89.7 | 2.2 | -4.03 | 0.68 | 0.78 | 3.21 | 3.3 | 0.005 | 0.70 | 0.0 | 0.04 | 16.51 | 0.01 | 1.018 | 5.75 | 0.60 | 6.9 | 92.4 | 0.6 | -1.76 | 0.71 | 0.81 | 0.88 | 2.51 | 131766 | 7061 | 57 | 3483 | 438 | 6 | 0 | logfile |
✔ | 7MT3 | 23975 | 2023-07-23 | 2021-05-12 | 2.8 | 2.45 | — | 2.9 | 0.007 | 0.80 | 0.0 | 0.04 | 13.62 | 0.01 | 1.298 | 2.40 | 0.13 | 7.0 | 92.9 | 0.1 | -4.52 | 0.84 | 0.86 | 4.06 | 2.9 | 0.007 | 0.67 | 0.0 | 0.04 | 14.24 | 0.01 | 1.022 | 6.18 | 1.92 | 6.5 | 93.4 | 0.1 | -1.21 | 1.13 | 0.84 | 0.87 | 3.14 | 147942 | 5616 | 68 | 4835 | 441 | 0 | 0 | logfile |
✔ | 5o5J | 3748 | 2023-07-20 | 2017-06-02 | 3.45 | 3.51 | — | 3.4 | 0.008 | 1.20 | 0.0 | 0.05 | 17.48 | 0.01 | 1.740 | 9.43 | 11.65 | 5.4 | 94.5 | 0.1 | -3.62 | 0.65 | 0.87 | 1.42 | 3.4 | 0.004 | 0.63 | 0.0 | 0.03 | 16.47 | 0.00 | 1.027 | 12.61 | 1.00 | 4.6 | 95.3 | 0.1 | 0.34 | 0.68 | 0.64 | 0.85 | 1.49 | 52163 | 2406 | 28 | 1536 | 219 | 0 | 0 | logfile |
✔ | 6T59 | 10380 | 2023-07-17 | 2019-10-15 | 3.11 | 3.19 | 3.02 | 7.3 | 0.011 | 0.83 | 0.0 | 0.05 | 17.10 | 0.00 | 1.148 | 10.80 | 0.76 | 8.9 | 91.0 | 0.1 | -5.04 | 0.22 | 0.01 | 0.07 | 3.1 | 0.003 | 0.82 | 0.0 | 0.04 | 19.21 | 0.01 | 1.027 | 22.23 | 0.57 | 6.7 | 93.3 | 0.0 | -2.56 | 2.15 | 0.61 | 0.61 | 0.53 | 143047 | 7383 | 64 | 3890 | 225 | 0 | 0 | logfile |
✔ | 7NWW | 12636 | 2023-07-19 | 2021-03-17 | 3.05 | 3.83 | 3.02 | 2.9 | 0.010 | 0.97 | 0.0 | 0.06 | 14.31 | 0.02 | 1.667 | 7.33 | 0.49 | 3.6 | 96.3 | 0.2 | -3.85 | 0.89 | 0.86 | 3.17 | 3.0 | 0.004 | 0.71 | 0.0 | 0.04 | 14.99 | 0.01 | 1.031 | 13.83 | 0.51 | 3.5 | 96.5 | 0.0 | -0.09 | 1.60 | 0.92 | 0.91 | 2.63 | 145149 | 5738 | 67 | 4651 | 415 | 0 | 0 | logfile |