The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DVF | 27737 | 2023-07-11 | 2022-07-28 | 3.3 | 2.89 | 3.38 | 3.2 | 0.004 | 0.68 | 0.0 | 0.05 | 12.29 | 0.00 | 1.862 | 10.34 | 1.78 | 4.9 | 95.1 | 0.0 | 0.22 | 0.64 | 0.75 | 2.04 | 2.9 | 0.002 | 0.58 | 0.0 | 0.04 | 16.53 | 0.00 | 1.946 | 10.00 | 0.28 | 4.6 | 95.4 | 0.0 | 0.28 | 0.85 | 0.66 | 0.78 | 1.95 | 23693 | 2914 | 14 | 17 | 10 | 0 | 0 | logfile |
✔ | 8G3F | 29694 | 2023-07-07 | 2023-02-07 | 3.7 | 3.93 | 3.85 | 3.9 | 0.005 | 0.79 | 0.0 | 0.04 | 15.49 | 0.00 | 2.148 | 8.08 | 0.90 | 6.0 | 94.0 | 0.0 | 0.23 | 0.68 | 0.71 | 1.06 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 16.67 | 0.00 | 2.143 | 9.64 | 0.45 | 5.4 | 94.6 | 0.0 | 0.54 | 1.36 | 0.69 | 0.75 | 0.84 | 14442 | 1791 | 7 | 0 | 4 | 0 | 0 | logfile |
✔ | 8FoK | 29352 | 2023-07-09 | 2022-12-30 | 3.56 | 3.95 | 3.62 | 3.5 | 0.008 | 0.92 | 1.0 | 0.04 | 16.21 | 0.01 | 2.141 | 9.65 | 0.15 | 2.3 | 97.7 | 0.0 | 0.89 | 0.84 | 0.68 | 1.87 | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 16.30 | 0.00 | 2.103 | 12.52 | 0.15 | 2.8 | 97.2 | 0.0 | 1.14 | 1.89 | 0.94 | 0.84 | 1.96 | 18827 | 2261 | 7 | 35 | 1 | 0 | 0 | logfile |
✔ | 7YRY | 34066 | 2023-07-12 | 2022-08-11 | 3.0 | 2.80 | 2.85 | 2.9 | 0.002 | 0.54 | 0.0 | 0.04 | 17.65 | 0.00 | 2.041 | 5.87 | 3.35 | 2.5 | 97.5 | 0.0 | 0.38 | 0.86 | 0.88 | 2.67 | 3.0 | 0.005 | 0.62 | 0.0 | 0.05 | 17.76 | 0.00 | 1.867 | 7.06 | 4.23 | 4.1 | 95.9 | 0.0 | 0.35 | 0.23 | 0.86 | 0.89 | 2.71 | 25056 | 3282 | 13 | 0 | 9 | 0 | 0 | logfile |
✔ | 8SZA | 40905 | 2023-07-03 | 2023-05-29 | 2.75 | 3.32 | 2.81 | 3.4 | 0.003 | 0.65 | 0.0 | 0.03 | 14.83 | 0.00 | 2.185 | 8.19 | 0.98 | 0.3 | 99.7 | 0.0 | 2.12 | 0.50 | 0.78 | 1.28 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 15.68 | 0.00 | 2.280 | 8.99 | 2.16 | 0.7 | 99.3 | 0.0 | 2.68 | 0.49 | 0.50 | 0.78 | 1.33 | 4800 | 606 | 11 | 0 | 6 | 0 | 0 | logfile |
✘ | 7YSW | 34084 | 2023-07-06 | 2022-08-13 | 3.03 | 3.51 | 3.06 | 3.4 | 0.007 | 1.01 | 0.0 | 0.20 | 16.78 | 0.00 | 1.948 | 10.59 | 4.77 | 6.4 | 93.6 | 0.0 | -1.74 | 0.76 | 0.80 | 3.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12407 | 1517 | 7 | 0 | 12 | 0 | 0 | logfile |
✔ | 7X6C | 33021 | 2023-07-10 | 2022-03-07 | 3.15 | 3.36 | 3.18 | 3.4 | 0.004 | 0.74 | 0.0 | 0.04 | 16.79 | 0.01 | 2.249 | 3.20 | 0.66 | 3.3 | 96.7 | 0.0 | -0.29 | 0.71 | 0.82 | 3.06 | 3.4 | 0.003 | 0.50 | 0.0 | 0.04 | 16.75 | 0.00 | 2.109 | 5.48 | 0.00 | 3.3 | 96.7 | 0.0 | 1.81 | 0.36 | 0.71 | 0.86 | 2.98 | 22632 | 2700 | 8 | 0 | 24 | 0 | 0 | logfile |
✔ | 8SZB | 40907 | 2023-07-03 | 2023-05-29 | 3.07 | 3.36 | 3.01 | 3.5 | 0.003 | 0.51 | 0.0 | 0.03 | 16.92 | 0.00 | 2.154 | 9.22 | 0.37 | 1.5 | 98.5 | 0.0 | 2.06 | 0.49 | 0.73 | 0.50 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 17.63 | 0.00 | 2.065 | 8.54 | 0.00 | 1.8 | 98.2 | 0.0 | 4.01 | 0.70 | 0.51 | 0.79 | 1.65 | 4962 | 612 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7Y1L | 33565 | 2023-07-05 | 2022-06-08 | 3.73 | 3.98 | 3.74 | 3.9 | 0.005 | 0.59 | 0.0 | 0.04 | 11.09 | 0.00 | 2.202 | 8.44 | 1.03 | 1.8 | 98.2 | 0.0 | 2.57 | 0.64 | 0.85 | 1.27 | 3.9 | 0.003 | 0.60 | 0.0 | 0.04 | 14.03 | 0.00 | 2.016 | 9.74 | 0.11 | 1.3 | 98.7 | 0.0 | 2.50 | 0.48 | 0.64 | 0.85 | 0.87 | 8955 | 1189 | 1 | 0 | 5 | 0 | 0 | logfile |
✔ | 7YNJ | 33963 | 2023-07-03 | 2022-07-31 | 3.33 | 3.63 | 3.37 | 3.7 | 0.004 | 0.68 | 0.0 | 0.04 | 12.87 | 0.01 | 2.249 | 13.26 | 0.00 | 3.8 | 96.2 | 0.0 | 1.41 | 0.55 | 0.72 | 1.45 | 3.7 | 0.003 | 0.67 | 0.0 | 0.04 | 15.10 | 0.01 | 2.194 | 13.38 | 0.24 | 3.6 | 96.4 | 0.0 | 1.54 | 0.39 | 0.52 | 0.73 | 1.44 | 4371 | 592 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8FS8 | 29417 | 2023-07-10 | 2023-01-09 | 3.04 | 3.37 | 3.15 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 14.05 | 0.00 | 2.003 | 9.25 | 3.29 | 3.1 | 96.9 | 0.0 | 0.66 | 0.66 | 0.75 | 2.11 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 16.87 | 0.00 | 1.906 | 11.50 | 0.21 | 4.7 | 95.3 | 0.0 | 0.15 | 1.04 | 0.71 | 0.79 | 2.01 | 21906 | 2582 | 16 | 55 | 9 | 0 | 0 | logfile |
✔ | 8iPS | 35642 | 2023-07-05 | 2023-03-14 | 3.6 | 3.89 | 3.62 | 3.8 | 0.005 | 0.70 | 0.0 | 0.04 | 18.31 | 0.01 | 2.221 | 8.07 | 0.21 | 7.6 | 92.4 | 0.0 | 0.29 | 0.75 | 0.82 | 1.33 | 3.8 | 0.003 | 0.61 | 0.0 | 0.04 | 18.75 | 0.00 | 2.201 | 6.05 | 0.32 | 6.8 | 93.1 | 0.1 | 0.80 | 1.42 | 0.73 | 0.82 | 1.10 | 9071 | 1161 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8SEV | 40430 | 2023-07-10 | 2023-04-10 | 3.17 | 3.33 | 3.18 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 14.38 | 0.00 | 2.236 | 6.19 | 0.00 | 3.1 | 96.9 | 0.0 | 1.76 | 0.60 | 0.79 | 2.51 | 3.3 | 0.002 | 0.50 | 0.0 | 0.04 | 15.99 | 0.00 | 2.211 | 6.87 | 0.09 | 3.2 | 96.8 | 0.0 | 1.78 | 0.49 | 0.60 | 0.81 | 1.90 | 20632 | 2504 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8JD3 | 36174 | 2023-07-08 | 2023-05-12 | 3.3 | 3.50 | 3.27 | 3.5 | 0.004 | 0.53 | 0.0 | 0.10 | 13.23 | 0.00 | 2.210 | 6.60 | 0.13 | 4.0 | 96.0 | 0.0 | -0.23 | 0.62 | 0.64 | 1.75 | 3.5 | 0.008 | 0.78 | 0.0 | 0.05 | 15.32 | 0.00 | 2.109 | 11.43 | 0.27 | 7.5 | 92.5 | 0.0 | -1.18 | 0.58 | 0.67 | 0.72 | 1.71 | 15770 | 2148 | 7 | 0 | 5 | 0 | 0 | logfile |
✔ | 8A1V | 15090 | 2023-07-14 | 2022-06-02 | 2.73 | 2.26 | 2.68 | 2.5 | 0.003 | 0.54 | 0.0 | 0.04 | 14.38 | 0.00 | 1.991 | 3.08 | 0.78 | 1.7 | 98.3 | 0.0 | 1.02 | 0.61 | 0.75 | 3.70 | 2.2 | 0.003 | 0.55 | 0.0 | 0.04 | 16.30 | 0.00 | 1.916 | 7.36 | 1.68 | 2.8 | 97.2 | 0.0 | 0.19 | 0.74 | 0.61 | 0.80 | 3.46 | 29906 | 1892 | 16 | 0 | 14 | 386 | 14644 | logfile |
✔ | 8A1W | 15091 | 2023-07-14 | 2022-06-02 | 2.56 | 2.20 | 2.53 | 2.4 | 0.004 | 0.56 | 0.0 | 0.04 | 15.09 | 0.00 | 2.014 | 2.96 | 0.32 | 1.1 | 98.9 | 0.0 | 1.65 | 0.60 | 0.72 | 3.88 | 2.4 | 0.004 | 0.58 | 0.0 | 0.04 | 16.95 | 0.00 | 0.766 | 8.09 | 1.86 | 3.0 | 97.0 | 0.0 | 0.24 | 1.46 | 0.63 | 0.82 | 3.75 | 30172 | 1908 | 16 | 0 | 16 | 289 | 14776 | logfile |
✔ | 8FS4 | 29413 | 2023-07-10 | 2023-01-09 | 2.94 | 3.30 | 3.09 | 3.3 | 0.004 | 0.65 | 0.0 | 0.05 | 18.37 | 0.00 | 1.835 | 9.66 | 2.69 | 3.6 | 96.4 | 0.0 | -0.22 | 0.66 | 0.78 | 1.97 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 18.96 | 0.00 | 1.885 | 11.45 | 3.78 | 3.6 | 96.4 | 0.0 | 0.30 | 0.50 | 0.62 | 0.78 | 2.23 | 21291 | 2539 | 16 | 42 | 9 | 0 | 0 | logfile |
✔ | 8J1N | 35928 | 2023-07-03 | 2023-04-13 | 2.51 | 2.65 | 2.47 | 2.7 | 0.009 | 1.01 | 0.0 | 0.05 | 14.64 | 0.00 | 2.219 | 8.99 | 0.00 | 2.9 | 97.1 | 0.0 | 1.72 | 0.60 | 0.79 | 3.77 | 2.7 | 0.003 | 0.52 | 0.0 | 0.04 | 16.76 | 0.00 | 2.257 | 6.56 | 1.18 | 1.7 | 98.3 | 0.0 | 3.31 | 0.57 | 0.63 | 0.87 | 3.43 | 3292 | 414 | 3 | 0 | 4 | 0 | 0 | logfile |
✔ | 8J19 | 35914 | 2023-07-04 | 2023-04-12 | 3.23 | 3.65 | 3.37 | 3.6 | 0.005 | 0.63 | 1.0 | 0.04 | 15.96 | 0.00 | 2.220 | 5.65 | 0.74 | 1.9 | 98.1 | 0.0 | 0.90 | 0.65 | 0.84 | 3.13 | 3.6 | 0.002 | 0.58 | 0.0 | 0.04 | 16.14 | 0.00 | 2.188 | 7.25 | 0.11 | 2.1 | 97.9 | 0.0 | 0.76 | 0.94 | 0.60 | 0.83 | 2.93 | 8801 | 1129 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8G2W | 29683 | 2023-07-12 | 2023-02-06 | 3.7 | 4.07 | 3.84 | 3.9 | 0.004 | 0.63 | 0.0 | 0.04 | 16.71 | 0.00 | 2.039 | 14.25 | 0.11 | 2.4 | 97.6 | 0.0 | 1.34 | 0.79 | 0.80 | 1.13 | 3.9 | 0.005 | 0.70 | 0.0 | 0.04 | 18.72 | 0.00 | 1.879 | 19.28 | 0.52 | 4.1 | 95.9 | 0.0 | 0.41 | 1.25 | 0.80 | 0.82 | 1.14 | 26829 | 3172 | 9 | 97 | 1 | 0 | 0 | logfile |