The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6W17 | 21502 | 2024-03-20 | 2020-03-03 | 3.9 | 3.99 | 3.93 | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 13.38 | 0.00 | 1.894 | 5.87 | 0.00 | 4.9 | 95.1 | 0.0 | -3.15 | 0.87 | 0.82 | 1.39 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 27396 | 3518 | 23 | 0 | 12 | 0 | 0 | logfile |
✘ | 6WTi | 21897 | 2024-03-14 | 2020-05-02 | 2.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9980 | 1207 | 8 | 0 | 14 | 0 | 0 | logfile |
✘ | 3JA8 | 6338 | 2024-03-21 | 2015-05-09 | 3.8 | 3.83 | — | 3.8 | 0.014 | 1.57 | 0.0 | 0.06 | 10.98 | 0.01 | 1.749 | 29.23 | 0.37 | 7.9 | 91.0 | 1.1 | -4.26 | 0.68 | 0.80 | 2.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29838 | 3786 | 12 | 0 | 6 | 0 | 0 | logfile |
✘ | 7DXA | 30902 | 2024-03-16 | 2021-01-18 | 3.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15162 | 1629 | 23 | 0 | 50 | 0 | 0 | logfile |
✘ | 7oY8 | 13110 | 2024-03-19 | 2021-06-23 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22902 | 2293 | 103 | 0 | 68 | 372 | 0 | logfile |
✘ | 7XUG | 33468 | 2024-03-20 | 2022-05-18 | 3.57 | 3.53 | — | 3.6 | 0.009 | 0.87 | 0.0 | 0.05 | 16.50 | 0.01 | 1.938 | 6.66 | 0.11 | 8.9 | 91.0 | 0.1 | -2.20 | 0.77 | 0.82 | 2.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26026 | 3172 | 9 | 60 | 3 | 0 | 0 | logfile |
✘ | 7JNA | 22403 | 2024-03-11 | 2020-08-04 | 3.6 | 3.74 | — | 3.8 | 0.005 | 0.72 | 0.0 | 0.05 | 12.95 | 0.03 | 2.215 | 12.10 | 0.00 | 4.3 | 95.7 | 0.0 | -3.83 | 0.63 | 0.71 | 1.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6432 | 834 | 9 | 0 | 15 | 0 | 0 | logfile |
✘ | 6QUM | 4640 | 2024-03-24 | 2019-02-27 | 3.25 | 3.47 | — | 3.4 | 0.007 | 1.10 | 0.0 | 0.06 | 10.75 | 0.01 | 2.095 | 4.88 | 0.82 | 6.7 | 93.2 | 0.0 | -3.78 | 0.83 | 0.87 | 2.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 44900 | 5874 | 27 | 0 | 3 | 0 | 0 | logfile |
✘ | 6SYT | 10347 | 2024-03-17 | 2019-10-01 | 3.45 | 3.54 | — | 3.5 | 0.018 | 1.23 | 0.0 | 0.16 | 11.02 | 0.01 | 1.903 | 3.04 | 0.13 | 7.5 | 92.4 | 0.1 | -5.37 | 0.69 | 0.81 | 4.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18369 | 2369 | 5 | 0 | 216 | 0 | 0 | logfile |
✘ | 5UK2 | 8564 | 2024-03-22 | 2017-01-19 | 4.8 | 4.64 | — | 4.6 | 0.012 | 1.36 | 0.0 | 0.07 | 12.49 | 0.01 | 2.083 | 3.96 | 0.16 | 8.7 | 91.1 | 0.1 | -4.11 | 0.80 | 0.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33948 | 2196 | 21 | 0 | 33 | 0 | 16401 | logfile |
✘ | 5UCY | 8539 | 2024-03-19 | 2016-12-22 | 4.6 | 4.99 | — | 4.6 | 0.011 | 1.21 | 3.0 | 0.06 | 13.21 | 0.01 | 0.244 | 89.25 | 0.68 | 11.3 | 88.3 | 0.5 | -4.47 | 0.50 | 0.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24990 | 2610 | 12 | 3 | 6 | 0 | 4452 | logfile |
✘ | 7R1D | 14239 | 2024-03-10 | 2022-02-02 | 3.5 | 3.51 | — | 3.5 | 0.005 | 0.80 | 0.0 | 0.05 | 13.61 | 0.01 | 2.097 | 17.88 | 0.00 | 7.1 | 92.9 | 0.0 | -1.31 | 0.77 | 0.79 | 2.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5183 | 653 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7XJi | 33228 | 2024-03-11 | 2022-04-18 | 3.9 | 3.60 | 3.70 | 3.9 | 0.003 | 0.60 | 0.0 | 0.04 | 13.92 | 0.00 | 2.165 | 9.02 | 0.00 | 4.3 | 95.7 | 0.0 | -0.25 | 0.61 | 0.78 | 2.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7851 | 1027 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 6oLL | 20116 | 2024-03-18 | 2019-04-16 | 4.1 | 4.59 | — | 4.4 | 0.004 | 1.05 | 0.0 | 0.06 | 6.94 | 0.01 | 2.400 | 0.40 | 0.00 | 2.0 | 97.8 | 0.2 | -0.51 | 0.67 | 0.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10426 | 2114 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7EFD | 31084 | 2024-03-10 | 2021-03-21 | 1.77 | 1.78 | 1.82 | 1.9 | 0.033 | 3.16 | 12.0 | 0.09 | 15.32 | 0.02 | 0.001 | 1.61 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.74 | 0.82 | 5.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4004 | 480 | 4 | 0 | 4 | 156 | 0 | logfile |
✘ | 8DQ1 | 27646 | 2024-03-18 | 2022-07-18 | 4.1 | 3.85 | 3.29 | 3.9 | 0.011 | 1.10 | 3.0 | 0.06 | 19.21 | 0.01 | 2.082 | 14.69 | 0.87 | 5.7 | 94.3 | 0.0 | -1.40 | 0.44 | 0.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17754 | 1075 | 8 | 36 | 2 | 0 | 8343 | logfile |
✘ | 7VG2 | 31963 | 2024-03-11 | 2021-09-14 | 3.1 | 2.73 | — | 3.0 | 0.016 | 1.43 | 1.0 | 0.09 | 16.55 | 0.01 | 1.822 | 17.56 | 1.74 | 8.0 | 91.8 | 0.2 | -3.84 | 0.72 | 0.79 | 3.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8203 | 845 | 4 | 71 | 3 | 0 | 0 | logfile |
✘ | 6KUP | 9579 | 2024-03-15 | 2019-09-02 | 4.3 | 4.37 | — | 4.3 | 0.004 | 0.81 | 0.0 | 0.05 | 11.44 | 0.01 | 2.227 | 6.50 | 0.16 | 7.1 | 92.6 | 0.2 | -4.90 | 0.71 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12254 | 1461 | 5 | 23 | 0 | 0 | 0 | logfile |
✘ | 6RAJ | 4777 | 2024-03-15 | 2019-04-06 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10198 | 1282 | 5 | 0 | 4 | 0 | 0 | logfile |
✘ | 5T4D | 8354 | 2024-03-16 | 2016-08-29 | 3.0 | 3.12 | 2.96 | 3.1 | 0.010 | 0.81 | 0.0 | 0.05 | 9.48 | 0.00 | 2.120 | 12.34 | 0.26 | 4.4 | 95.6 | 0.0 | -2.69 | 0.75 | 0.79 | 4.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14876 | 1852 | 8 | 0 | 12 | 0 | 0 | logfile |