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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7SY0 | 25512 | 2024-03-11 | 2021-11-24 | 3.0 | 3.75 | — | 3.5 | 0.005 | 0.84 | 0.0 | 0.06 | 13.35 | 0.01 | 2.295 | 2.42 | 0.00 | 1.4 | 98.6 | 0.0 | -0.49 | 0.80 | 0.83 | 3.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6553 | 797 | 4 | 0 | 7 | 0 | 0 | logfile |
✘ | 8F6C | 28879 | 2024-03-17 | 2022-11-16 | 3.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19344 | 2396 | 12 | 0 | 12 | 0 | 0 | logfile |
✘ | 6JLU | 9839 | 2024-03-21 | 2019-03-06 | 3.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 102777 | 9704 | 128 | 0 | 820 | 1 | 0 | logfile |
✘ | 7XE4 | 33154 | 2024-03-15 | 2022-03-29 | 3.4 | 3.88 | — | 3.8 | 0.006 | 0.86 | 0.0 | 0.04 | 15.21 | 0.01 | 2.199 | 8.78 | 0.45 | 10.0 | 89.6 | 0.4 | -2.45 | 0.71 | 0.84 | 2.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12529 | 1503 | 3 | 0 | 27 | 0 | 0 | logfile |
✘ | 7SXW | 25508 | 2024-03-19 | 2021-11-24 | 2.85 | 3.59 | — | 2.9 | 0.005 | 0.76 | 0.0 | 0.05 | 12.80 | 0.01 | 2.290 | 2.27 | 0.00 | 2.8 | 97.2 | 0.0 | -0.63 | 0.83 | 0.80 | 2.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25242 | 3120 | 24 | 0 | 60 | 0 | 0 | logfile |
✘ | 6WDR | 21644 | 2024-03-16 | 2020-04-01 | 3.7 | 3.72 | — | 3.4 | 0.013 | 1.27 | 2.0 | 0.07 | 23.90 | 0.01 | 2.181 | 8.79 | 1.35 | 11.7 | 88.2 | 0.1 | -5.01 | 0.85 | 0.81 | 1.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 74473 | 4984 | 32 | 1647 | 0 | 0 | 0 | logfile |
✘ | 7SPi | 24771 | 2024-03-11 | 2021-11-02 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 8EoS | 28466 | 2024-03-19 | 2022-10-04 | 3.1 | 3.84 | 3.11 | 3.5 | 0.005 | 0.57 | 0.0 | 0.04 | 15.24 | 0.00 | 1.840 | 20.11 | 3.59 | 5.2 | 94.7 | 0.2 | -0.81 | 0.90 | 0.89 | 2.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25606 | 3069 | 11 | 87 | 5 | 0 | 0 | logfile |
✘ | 8FHD | 29082 | 2024-03-15 | 2022-12-14 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12686 | 1467 | 6 | 0 | 35 | 0 | 0 | logfile |
✘ | 7XVF | 33485 | 2024-03-16 | 2022-05-22 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13625 | 1554 | 8 | 0 | 42 | 0 | 0 | logfile |
✘ | 7SY3 | 25515 | 2024-03-20 | 2021-11-24 | 2.95 | 3.95 | — | 3.2 | 0.005 | 0.82 | 0.0 | 0.06 | 13.04 | 0.01 | 2.278 | 2.67 | 0.00 | 1.9 | 98.1 | 0.0 | -0.06 | 0.84 | 0.82 | 2.39 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 27001 | 3321 | 26 | 0 | 62 | 0 | 0 | logfile |
✘ | 8F68 | 28877 | 2024-03-14 | 2022-11-16 | 3.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9666 | 1198 | 6 | 0 | 6 | 0 | 0 | logfile |
✘ | 8DJM | 27461 | 2024-03-11 | 2022-07-01 | 3.23 | 3.66 | 3.31 | 3.6 | 0.029 | 1.53 | 2.0 | 1.04 | 32.65 | 0.00 | 1.844 | 8.23 | 0.82 | 3.7 | 96.3 | 0.0 | -2.26 | 0.49 | 0.75 | 3.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7032 | 862 | 7 | 0 | 8 | 0 | 0 | logfile |
✘ | 7VFU | 31959 | 2024-03-18 | 2021-09-13 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19946 | 2409 | 9 | 0 | 41 | 0 | 0 | logfile |
✘ | 6UiW | 20789 | 2024-03-19 | 2019-10-01 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23617 | 3234 | 22 | 0 | 11 | 0 | 0 | logfile |
✘ | 7XVE | 33484 | 2024-03-16 | 2022-05-21 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13659 | 1569 | 8 | 0 | 42 | 0 | 0 | logfile |
✘ | 8DJK | 27460 | 2024-03-11 | 2022-06-30 | 3.33 | 3.77 | 3.32 | 3.7 | 0.029 | 1.52 | 1.0 | 1.03 | 32.03 | 0.01 | 1.327 | 7.25 | 0.82 | 5.0 | 95.0 | 0.0 | -1.84 | 0.48 | 0.73 | 2.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7091 | 870 | 7 | 0 | 8 | 0 | 0 | logfile |
✘ | 7VFV | 31960 | 2024-03-18 | 2021-09-13 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19776 | 2383 | 8 | 0 | 40 | 0 | 0 | logfile |
✘ | 7LC6 | 23269 | 2024-03-18 | 2021-01-09 | 3.7 | 4.12 | 3.73 | 3.9 | 0.010 | 1.12 | 0.0 | 0.06 | 12.51 | 0.01 | 2.211 | 5.74 | 1.51 | 7.4 | 92.6 | 0.0 | -2.96 | 0.71 | 0.73 | 1.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21891 | 1440 | 7 | 0 | 3 | 4 | 11106 | logfile |
✘ | 7VBB | 31877 | 2024-03-22 | 2021-08-31 | 2.81 | 3.06 | — | 3.2 | 0.010 | 1.49 | 91.0 | 0.10 | 16.58 | 0.01 | 1.842 | 28.27 | 6.12 | 8.6 | 91.0 | 0.4 | -3.42 | 0.59 | 0.68 | 1.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33151 | 4049 | 20 | 47 | 6 | 0 | 0 | logfile |