The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7W85 | 32352 | 2023-08-20 | 2021-12-07 | 2.94 | 3.13 | — | 3.1 | 0.008 | 0.76 | 0.0 | 0.05 | 13.72 | 0.00 | 2.070 | 9.39 | 0.00 | 5.6 | 94.4 | 0.0 | -0.79 | 0.64 | 0.63 | 2.89 | 3.1 | 0.004 | 0.68 | 0.0 | 0.04 | 16.34 | 0.00 | 1.913 | 9.86 | 1.46 | 5.1 | 94.9 | 0.0 | 0.06 | 1.59 | 0.75 | 0.86 | 2.58 | 81522 | 10440 | 48 | 0 | 42 | 0 | 0 | logfile |
✔ | 7CF9 | 30343 | 2023-08-12 | 2020-06-24 | 4.7 | 4.24 | 5.21 | 4.0 | 0.006 | 1.24 | 0.0 | 0.06 | 16.01 | 0.01 | 1.538 | 5.47 | 1.67 | 6.2 | 93.7 | 0.1 | -4.86 | 0.79 | 0.68 | — | 4.0 | 0.003 | 0.76 | 0.0 | 0.04 | 13.67 | 0.00 | 2.032 | 14.49 | 0.00 | 5.5 | 94.5 | 0.0 | -2.02 | 1.79 | 0.81 | 0.74 | — | 116104 | 14416 | 12 | 0 | 1820 | 0 | 0 | logfile |
✔ | 7R7C | 24297 | 2023-08-13 | 2021-06-24 | 3.71 | 3.61 | 3.17 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 15.84 | 0.00 | 2.134 | 11.12 | 0.00 | 4.8 | 95.2 | 0.0 | -0.30 | 0.74 | 0.77 | 2.08 | 3.3 | 0.005 | 0.67 | 0.0 | 0.04 | 17.37 | 0.00 | 2.088 | 15.46 | 0.45 | 6.1 | 93.9 | 0.0 | -0.63 | 0.43 | 0.75 | 0.79 | 1.91 | 14950 | 1273 | 11 | 226 | 0 | 0 | 0 | logfile |
✔ | 8EUi | 24423 | 2023-08-16 | 2022-10-18 | 3.1 | 3.13 | — | 3.1 | 0.004 | 0.52 | 0.0 | 0.03 | 15.20 | 0.00 | 2.143 | 7.87 | 0.18 | 3.8 | 96.2 | 0.1 | -0.02 | 0.82 | 0.81 | 3.11 | 3.1 | 0.004 | 0.56 | 0.0 | 0.04 | 15.41 | 0.00 | 2.061 | 8.79 | 0.30 | 4.0 | 96.0 | 0.0 | 0.31 | 0.28 | 0.82 | 0.82 | 2.66 | 122892 | 7155 | 47 | 3131 | 1 | 0 | 0 | logfile |
✔ | 7ZDT | 14669 | 2023-08-11 | 2022-03-29 | 2.71 | 2.89 | 2.68 | 2.9 | 0.005 | 0.66 | 0.0 | 0.04 | 13.49 | 0.00 | 1.945 | 6.38 | 0.00 | 1.3 | 98.7 | 0.0 | -0.81 | 0.76 | 0.90 | 3.85 | 2.9 | 0.004 | 0.55 | 0.0 | 0.04 | 15.76 | 0.00 | 1.944 | 5.22 | 1.28 | 1.7 | 98.3 | 0.0 | 2.14 | 0.34 | 0.74 | 0.91 | 3.63 | 9003 | 1155 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 8HSJ | 34999 | 2023-08-15 | 2022-12-19 | 3.6 | 4.38 | 3.44 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 14.73 | 0.01 | 1.788 | 16.52 | 4.93 | 3.7 | 96.0 | 0.3 | -0.81 | 0.82 | 0.68 | 0.35 | 3.9 | 0.004 | 0.81 | 0.0 | 0.04 | 16.44 | 0.01 | 1.074 | 23.89 | 0.99 | 3.5 | 96.2 | 0.3 | -0.24 | 1.32 | 0.85 | 0.73 | 0.36 | 17244 | 2166 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 8ESR | 24422 | 2023-08-12 | 2022-10-14 | 3.2 | 3.24 | — | 3.0 | 0.002 | 0.47 | 0.0 | 0.03 | 15.69 | 0.00 | 2.118 | 7.71 | 0.28 | 3.0 | 96.9 | 0.1 | 0.71 | 0.76 | 0.74 | 2.20 | 3.0 | 0.005 | 0.57 | 0.0 | 0.04 | 15.74 | 0.00 | 2.095 | 10.25 | 0.32 | 4.1 | 95.9 | 0.1 | 1.10 | 0.34 | 0.78 | 0.77 | 2.07 | 116762 | 9286 | 57 | 2372 | 1 | 0 | 0 | logfile |
✔ | 8D0Z | 27113 | 2023-08-17 | 2022-05-26 | 3.7 | 3.01 | 3.67 | 3.4 | 0.021 | 1.79 | 0.0 | 0.10 | 9.95 | 0.01 | 2.116 | 1.66 | 0.08 | 2.9 | 97.1 | 0.0 | 0.76 | 0.59 | 0.75 | 2.57 | 3.3 | 0.003 | 0.65 | 0.0 | 0.04 | 14.88 | 0.00 | 2.194 | 9.42 | 0.40 | 4.1 | 95.9 | 0.0 | 0.38 | 0.87 | 0.59 | 0.76 | 1.98 | 22566 | 2878 | 8 | 0 | 11 | 0 | 0 | logfile |
✔ | 6TDV | 10468 | 2023-08-23 | 2019-11-10 | 2.8 | 3.00 | 2.85 | 3.0 | 0.009 | 1.08 | 0.0 | 0.04 | 16.68 | 0.00 | 2.093 | 3.34 | 0.00 | 2.6 | 97.4 | 0.0 | -1.24 | 0.66 | 0.82 | 4.29 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 17.08 | 0.00 | 1.961 | 7.68 | 0.94 | 1.8 | 98.2 | 0.0 | 1.92 | 0.78 | 0.64 | 0.84 | 4.01 | 92262 | 5464 | 62 | 0 | 61 | 0 | 44516 | logfile |
✔ | 7UDU | 26460 | 2023-08-14 | 2022-03-20 | 4.15 | 4.18 | 4.07 | 4.1 | 0.004 | 0.67 | 0.0 | 0.05 | 14.26 | 0.00 | 2.186 | 10.92 | 0.06 | 6.0 | 94.0 | 0.0 | -0.29 | 0.55 | 0.65 | — | 4.1 | 0.003 | 0.73 | 0.0 | 0.04 | 14.65 | 0.00 | 1.892 | 13.07 | 0.18 | 5.3 | 94.7 | 0.0 | -0.38 | 1.44 | 0.65 | 0.80 | — | 15711 | 1966 | 9 | 0 | 8 | 0 | 0 | logfile |
✔ | 7YQ4 | 34019 | 2023-08-12 | 2022-08-05 | 3.95 | 4.36 | 4.08 | 4.3 | 0.016 | 1.30 | 0.0 | 0.07 | 17.82 | 0.02 | 2.256 | 4.50 | 0.53 | 9.0 | 91.0 | 0.0 | -4.40 | 0.72 | 0.74 | 1.65 | 4.3 | 0.004 | 0.95 | 0.0 | 0.05 | 18.94 | 0.01 | 2.113 | 10.94 | 0.79 | 9.1 | 90.9 | 0.0 | -2.93 | 1.12 | 0.74 | 0.80 | 1.46 | 10618 | 1243 | 5 | 24 | 0 | 0 | 0 | logfile |
✔ | 7NVT | 12612 | 2023-08-26 | 2021-03-16 | 2.9 | 3.03 | 2.87 | 2.9 | 0.003 | 0.47 | 0.0 | 0.04 | 15.56 | 0.00 | 1.979 | 4.90 | 0.00 | 2.8 | 97.2 | 0.0 | 1.40 | 0.75 | 0.75 | 3.26 | 2.9 | 0.004 | 0.65 | 0.0 | 0.04 | 18.28 | 0.00 | 2.028 | 11.46 | 1.72 | 3.2 | 96.8 | 0.0 | 0.63 | 2.20 | 0.78 | 0.82 | 2.79 | 44114 | 5249 | 30 | 100 | 11 | 0 | 0 | logfile |
✔ | 7T4X | 25691 | 2023-08-20 | 2021-12-10 | 2.8 | 3.07 | 2.83 | 3.1 | 0.006 | 0.93 | 0.0 | 0.05 | 12.97 | 0.01 | 2.392 | 0.82 | 1.52 | 1.4 | 98.6 | 0.0 | -0.26 | 0.66 | 0.83 | 3.93 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 14.77 | 0.00 | 2.041 | 5.58 | 0.38 | 2.2 | 97.8 | 0.0 | 1.86 | 0.91 | 0.67 | 0.86 | 3.21 | 29234 | 1778 | 11 | 0 | 7 | 13 | 14614 | logfile |
✔ | 6WUA | 21908 | 2023-08-13 | 2020-05-04 | 3.2 | 2.89 | — | 2.7 | 0.007 | 0.81 | 0.0 | 0.05 | 16.54 | 0.01 | 1.992 | 9.24 | 14.80 | 15.4 | 84.5 | 0.1 | -4.41 | 0.72 | 0.80 | 2.77 | 2.7 | 0.005 | 0.71 | 0.0 | 0.04 | 16.19 | 0.01 | 1.987 | 8.64 | 0.29 | 12.8 | 87.2 | 0.0 | -1.73 | 1.65 | 0.75 | 0.84 | 2.24 | 15195 | 833 | 9 | 402 | 1 | 0 | 0 | logfile |
✔ | 8EUP | 24410 | 2023-08-19 | 2022-10-19 | 3.1 | 3.34 | — | 3.2 | 0.004 | 0.56 | 0.0 | 0.04 | 17.14 | 0.00 | 2.108 | 12.23 | 0.40 | 5.3 | 94.6 | 0.1 | -0.11 | 0.72 | 0.69 | 1.81 | 3.2 | 0.002 | 0.55 | 0.0 | 0.03 | 17.05 | 0.00 | 1.996 | 13.56 | 0.35 | 4.1 | 95.8 | 0.1 | 0.45 | 0.40 | 0.73 | 0.71 | 1.64 | 78722 | 6156 | 41 | 1623 | 1 | 0 | 0 | logfile |
✔ | 5W7V | 8781 | 2023-08-16 | 2017-06-20 | 3.8 | 3.42 | — | 3.5 | 0.007 | 0.77 | 0.0 | 0.06 | 12.79 | 0.00 | 2.365 | 15.84 | 0.00 | 1.4 | 98.6 | 0.0 | -2.52 | 0.47 | 0.74 | 3.24 | 3.4 | 0.006 | 0.83 | 0.0 | 0.06 | 15.83 | 0.00 | 2.285 | 7.47 | 2.21 | 3.3 | 96.7 | 0.0 | -0.77 | 1.27 | 0.54 | 0.79 | 3.99 | 20430 | 2640 | 270 | 0 | 0 | 0 | 0 | logfile |
✘ | 7AMY | 11827 | 2023-08-18 | 2020-10-09 | 3.75 | 3.87 | 3.71 | 3.8 | 0.010 | 0.89 | 0.0 | 0.05 | 14.93 | 0.00 | 2.177 | 20.18 | 0.66 | 13.8 | 85.9 | 0.3 | -5.40 | 0.82 | 0.86 | 1.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24849 | 3177 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZFP | 11185 | 2023-08-20 | 2020-06-17 | 3.24 | 3.95 | 3.34 | 3.7 | 0.006 | 0.70 | 0.0 | 0.05 | 14.34 | 0.00 | 2.198 | 9.71 | 0.12 | 8.4 | 91.5 | 0.1 | -1.19 | 0.83 | 0.83 | 1.85 | 3.7 | 0.002 | 0.61 | 0.0 | 0.04 | 15.64 | 0.00 | 2.202 | 7.49 | 0.22 | 5.8 | 94.1 | 0.1 | 0.31 | 0.76 | 0.80 | 0.77 | 1.22 | 29385 | 3676 | 1 | 0 | 28 | 0 | 0 | logfile |
✔ | 7KC0 | 22803 | 2023-08-15 | 2020-10-04 | 3.2 | 3.58 | — | 3.3 | 0.005 | 0.66 | 0.0 | 0.05 | 15.92 | 0.00 | 2.210 | 11.20 | 2.90 | 6.0 | 94.0 | 0.0 | -3.23 | 0.84 | 0.79 | 1.65 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 17.18 | 0.00 | 1.991 | 13.01 | 0.29 | 6.5 | 93.5 | 0.0 | -1.18 | 0.53 | 0.85 | 0.82 | 1.75 | 19553 | 2334 | 10 | 47 | 4 | 0 | 0 | logfile |
✔ | 7D84 | 30612 | 2023-08-25 | 2020-10-07 | 3.7 | 4.34 | 3.76 | 4.2 | 0.009 | 0.90 | 0.0 | 0.05 | 15.25 | 0.01 | 2.271 | 6.09 | 7.78 | 2.1 | 97.9 | 0.0 | -2.70 | 0.84 | 0.84 | 2.66 | 4.2 | 0.004 | 0.82 | 0.0 | 0.04 | 17.37 | 0.00 | 2.048 | 13.02 | 0.56 | 0.7 | 99.3 | 0.0 | 0.33 | 1.37 | 0.82 | 0.81 | 2.81 | 42704 | 5406 | 34 | 0 | 0 | 0 | 0 | logfile |