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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5Lii | 4053 | 2023-08-08 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | 3.8 | 0.003 | 0.88 | 0.0 | 0.04 | 15.96 | 0.01 | 2.201 | 13.15 | 1.41 | 14.6 | 84.7 | 0.7 | -4.22 | 0.87 | 0.56 | 0.67 | 1.49 | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8C02 | 16353 | 2023-08-09 | 2022-12-15 | 4.09 | 4.26 | 4.03 | 4.2 | 0.004 | 0.83 | 0.0 | 0.04 | 13.16 | 0.01 | 2.225 | 19.86 | 0.44 | 4.1 | 95.9 | 0.0 | 1.51 | 0.58 | 0.77 | — | 4.2 | 0.004 | 0.79 | 0.0 | 0.04 | 13.27 | 0.00 | 2.201 | 17.06 | 0.00 | 4.3 | 95.7 | 0.0 | 1.78 | 1.54 | 0.58 | 0.77 | — | 4242 | 549 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EXA | 28656 | 2023-08-09 | 2022-10-25 | 3.14 | 3.45 | 3.09 | 3.4 | 0.004 | 0.54 | 0.0 | 0.03 | 17.45 | 0.00 | 2.223 | 15.79 | 0.40 | 3.6 | 96.4 | 0.0 | 0.27 | 0.61 | 0.69 | 4.07 | 3.4 | 0.003 | 0.52 | 0.0 | 0.03 | 17.87 | 0.00 | 2.219 | 16.00 | 1.21 | 3.6 | 96.4 | 0.0 | 0.46 | 1.14 | 0.60 | 0.68 | 3.76 | 5539 | 341 | 4 | 139 | 0 | 0 | 0 | logfile |
✔ | 7SC7 | 25028 | 2023-08-09 | 2021-09-27 | 2.8 | 3.66 | — | 3.3 | 0.007 | 1.08 | 1.0 | 0.06 | 14.67 | 0.01 | 2.240 | 6.50 | 1.49 | 2.4 | 97.6 | 0.0 | -1.25 | 0.73 | 0.87 | 1.85 | 3.2 | 0.005 | 0.99 | 1.0 | 0.05 | 16.95 | 0.01 | 1.998 | 23.67 | 2.66 | 3.2 | 96.8 | 0.0 | 0.75 | 0.70 | 0.72 | 0.88 | 1.52 | 107930 | 13756 | 156 | 0 | 72 | 0 | 0 | logfile |
✔ | 6UET | 20756 | 2023-08-09 | 2019-09-23 | 4.1 | 4.91 | — | 5.1 | 0.010 | 1.61 | 0.0 | 0.07 | 15.67 | 0.02 | 1.977 | 4.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.62 | 0.73 | — | 5.0 | 0.007 | 0.95 | 0.0 | 0.05 | 22.46 | 0.01 | 1.737 | 49.85 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.79 | 0.66 | 0.81 | — | 3869 | 0 | 1 | 119 | 1 | 0 | 1291 | logfile |
✔ | 7VQ7 | 32087 | 2023-08-09 | 2021-10-19 | 3.6 | 3.68 | — | 3.7 | 0.007 | 0.75 | 0.0 | 0.04 | 16.81 | 0.00 | 2.070 | 11.39 | 4.87 | 3.9 | 96.1 | 0.0 | -1.30 | 0.61 | 0.81 | 2.00 | 3.7 | 0.003 | 0.55 | 0.0 | 0.04 | 17.90 | 0.00 | 2.170 | 8.72 | 0.59 | 3.0 | 97.0 | 0.0 | 3.61 | 1.29 | 0.58 | 0.80 | 1.39 | 6127 | 778 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 6ZPG | 11338 | 2023-08-09 | 2020-07-08 | 4.6 | 4.29 | — | 7.0 | 0.004 | 0.99 | 0.0 | 0.05 | 15.64 | 0.01 | 2.313 | 5.51 | 0.25 | 5.6 | 94.4 | 0.0 | -3.85 | 0.60 | 0.55 | — | 7.0 | 0.003 | 0.83 | 0.0 | 0.04 | 15.58 | 0.00 | 2.236 | 19.15 | 0.00 | 6.1 | 93.9 | 0.0 | 0.38 | 1.97 | 0.65 | 0.63 | — | 3808 | 463 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DVU | 27745 | 2023-08-09 | 2022-07-29 | 2.9 | 3.07 | 2.86 | 3.0 | 0.002 | 0.51 | 0.0 | 0.04 | 13.39 | 0.00 | 2.164 | 6.25 | 1.01 | 6.2 | 93.8 | 0.0 | -2.23 | 0.73 | 0.84 | 3.49 | 3.0 | 0.004 | 0.57 | 0.0 | 0.04 | 15.42 | 0.00 | 2.030 | 6.08 | 2.01 | 7.8 | 92.2 | 0.0 | 0.24 | 0.42 | 0.70 | 0.84 | 3.74 | 6170 | 669 | 3 | 36 | 3 | 0 | 0 | logfile |
✔ | 6SUF | 10313 | 2023-08-09 | 2019-09-13 | 3.4 | 3.32 | — | 3.3 | 0.021 | 1.77 | 6.0 | 0.10 | 10.78 | 0.01 | 2.186 | 1.73 | 0.00 | 2.4 | 97.3 | 0.3 | -0.46 | 0.80 | 0.80 | 2.93 | 3.3 | 0.004 | 0.66 | 1.0 | 0.04 | 14.92 | 0.00 | 1.996 | 10.75 | 0.15 | 4.0 | 96.0 | 0.0 | 0.49 | 1.32 | 0.82 | 0.84 | 2.61 | 108112 | 13607 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QL1 | 14060 | 2023-08-09 | 2021-12-19 | 3.34 | 3.41 | 3.13 | 3.4 | 0.011 | 2.01 | 0.0 | 0.10 | 11.06 | 0.01 | 2.654 | 0.29 | 0.00 | 7.5 | 92.5 | 0.0 | -3.09 | 0.42 | 0.83 | 4.57 | 3.4 | 0.007 | 0.85 | 0.0 | 0.05 | 15.42 | 0.00 | 2.104 | 12.32 | 0.00 | 4.2 | 95.8 | 0.0 | -2.34 | 1.74 | 0.39 | 0.81 | 4.21 | 1671 | 219 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NT6 | 0503 | 2023-08-09 | 2019-01-28 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.79 | 0.0 | 0.04 | 11.99 | 0.01 | 2.316 | 3.70 | 0.00 | 3.8 | 96.2 | 0.0 | -3.32 | 0.69 | 0.80 | — | 4.1 | 0.002 | 0.72 | 0.0 | 0.04 | 15.61 | 0.00 | 2.295 | 7.27 | 0.00 | 2.7 | 97.3 | 0.0 | 1.43 | 1.19 | 0.69 | 0.80 | — | 4198 | 556 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N3A | 9349 | 2023-08-09 | 2018-11-14 | 3.3 | 3.44 | — | 3.6 | 0.008 | 1.14 | 0.0 | 0.05 | 14.53 | 0.01 | 2.469 | 17.25 | 0.00 | 8.9 | 91.1 | 0.0 | -5.23 | 0.49 | 0.76 | 3.75 | 3.7 | 0.005 | 0.90 | 0.0 | 0.04 | 18.94 | 0.00 | 2.214 | 16.77 | 0.68 | 10.4 | 89.6 | 0.0 | -5.19 | 1.68 | 0.52 | 0.79 | 2.83 | 4310 | 600 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DHA | 27434 | 2023-08-09 | 2022-06-25 | 3.8 | 4.85 | 4.37 | 4.8 | 0.004 | 0.76 | 0.0 | 0.05 | 17.00 | 0.01 | 2.155 | 15.08 | 0.49 | 4.8 | 95.2 | 0.0 | 0.08 | 0.69 | 0.73 | 0.68 | 4.8 | 0.004 | 0.78 | 0.0 | 0.05 | 17.77 | 0.00 | 2.108 | 13.09 | 0.49 | 5.8 | 94.2 | 0.0 | -0.54 | 0.56 | 0.69 | 0.73 | 0.85 | 3510 | 439 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 8oRE | 17121 | 2023-08-09 | 2023-04-13 | 2.5 | 2.67 | 2.44 | 2.7 | 0.011 | 2.09 | 7.0 | 0.14 | 10.93 | 0.01 | 2.570 | 0.00 | 0.00 | 8.0 | 92.0 | 0.0 | -2.10 | 0.32 | 0.74 | 5.29 | 2.7 | 0.003 | 0.69 | 0.0 | 0.05 | 17.33 | 0.00 | 2.218 | 3.60 | 1.00 | 6.7 | 93.3 | 0.0 | -1.84 | 3.46 | 0.37 | 0.81 | 5.04 | 3615 | 231 | 3 | 0 | 0 | 0 | 1845 | logfile |
✔ | 8DVS | 27744 | 2023-08-09 | 2022-07-29 | 3.0 | 3.15 | 2.97 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 13.64 | 0.00 | 2.271 | 7.41 | 1.32 | 6.8 | 93.2 | 0.0 | -1.94 | 0.68 | 0.80 | 2.76 | 3.1 | 0.002 | 0.54 | 0.0 | 0.04 | 15.88 | 0.00 | 2.201 | 6.40 | 2.63 | 7.4 | 92.6 | 0.0 | 0.64 | 0.45 | 0.71 | 0.85 | 3.21 | 6058 | 682 | 3 | 26 | 3 | 0 | 0 | logfile |
✔ | 7RTV | 24690 | 2023-08-09 | 2021-08-15 | 3.96 | 4.06 | — | 4.1 | 0.004 | 0.76 | 0.0 | 0.05 | 14.21 | 0.00 | 2.207 | 14.04 | 0.32 | 2.8 | 97.2 | 0.0 | 3.61 | 0.41 | 0.63 | 0.10 | 4.1 | 0.004 | 0.91 | 0.0 | 0.04 | 16.58 | 0.00 | 2.168 | 18.02 | 0.32 | 3.3 | 96.7 | 0.0 | 2.73 | 1.76 | 0.41 | 0.64 | 0.28 | 2881 | 366 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 6X0U | 21984 | 2023-08-09 | 2020-05-17 | 3.6 | 3.62 | — | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.277 | 5.74 | 0.00 | 3.7 | 96.1 | 0.3 | -5.79 | 0.26 | 0.78 | 1.89 | 3.6 | 0.002 | 0.69 | 0.0 | 0.04 | 17.79 | 0.00 | 2.197 | 7.98 | 0.29 | 3.2 | 96.8 | 0.0 | 1.27 | 0.82 | 0.27 | 0.79 | 2.52 | 3091 | 398 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XoM | 33352 | 2023-08-09 | 2022-05-01 | 3.2 | 3.57 | 3.19 | 3.2 | 0.002 | 0.49 | 0.0 | 0.04 | 13.30 | 0.00 | 2.175 | 10.99 | 0.02 | 0.9 | 99.1 | 0.0 | 2.16 | 0.87 | 0.86 | 1.74 | 3.2 | 0.004 | 0.57 | 0.0 | 0.04 | 15.12 | 0.00 | 2.120 | 12.24 | 0.16 | 1.2 | 98.7 | 0.0 | 2.04 | 1.29 | 0.88 | 0.88 | 1.52 | 54129 | 7336 | 15 | 0 | 32 | 0 | 0 | logfile |
✔ | 7VQ3 | 32084 | 2023-08-09 | 2021-10-19 | 3.2 | 3.40 | — | 3.4 | 0.005 | 0.55 | 0.0 | 0.04 | 14.66 | 0.00 | 2.061 | 5.90 | 0.00 | 6.6 | 93.4 | 0.0 | -0.93 | 0.65 | 0.83 | 2.45 | 3.4 | 0.002 | 0.50 | 0.0 | 0.04 | 16.61 | 0.00 | 2.240 | 6.29 | 0.00 | 3.2 | 96.8 | 0.0 | 3.25 | 0.60 | 0.63 | 0.83 | 1.84 | 6306 | 800 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iWM | 35771 | 2023-08-09 | 2023-03-30 | 3.17 | 3.65 | 2.80 | 3.5 | 0.004 | 0.76 | 0.0 | 0.04 | 14.98 | 0.00 | 2.390 | 9.55 | 5.26 | 3.4 | 96.6 | 0.0 | -2.66 | 0.56 | 0.76 | 2.24 | 3.5 | 0.002 | 0.65 | 0.0 | 0.04 | 15.22 | 0.00 | 2.254 | 8.78 | 1.05 | 2.2 | 97.8 | 0.0 | 0.48 | 0.58 | 0.59 | 0.77 | 2.24 | 1980 | 271 | 1 | 0 | 1 | 0 | 0 | logfile |