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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6QJH | 4563 | 2022-04-04 | 2019-01-24 | 3.3 | 3.70 | 2.77 | 3.6 | 0.012 | 1.21 | 3.0 | 0.10 | 14.39 | 0.01 | 2.673 | 1.49 | 1.96 | 7.0 | 93.0 | 0.0 | -3.22 | 0.36 | 0.83 | 2.97 | 3.6 | 0.003 | 0.61 | 0.0 | 0.05 | 15.77 | 0.00 | 2.278 | 5.61 | 0.00 | 2.3 | 97.7 | 0.0 | -2.55 | 1.57 | 0.31 | 0.78 | 2.85 | 1302 | 177 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6Mi8 | 9126 | 2022-04-04 | 2018-09-19 | 4.3 | 4.20 | — | 4.2 | 0.007 | 1.17 | 0.0 | 0.07 | 11.58 | 0.01 | 1.262 | 6.40 | 0.13 | 8.8 | 91.2 | 0.0 | -5.13 | 0.56 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7139 | 911 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 6N0G | 9315 | 2022-04-04 | 2018-11-07 | 3.6 | 3.75 | — | 3.7 | 0.008 | 0.87 | 0.0 | 0.06 | 8.90 | 0.01 | 2.232 | 6.43 | 0.18 | 2.7 | 97.3 | 0.0 | -3.39 | 0.81 | 0.85 | 3.75 | 3.7 | 0.004 | 0.68 | 0.0 | 0.04 | 14.89 | 0.00 | 2.089 | 14.02 | 0.42 | 2.2 | 97.8 | 0.0 | 0.20 | 2.43 | 0.81 | 0.86 | 2.92 | 55644 | 7545 | 57 | 0 | 0 | 0 | 0 | logfile |
✔ | 6JNF | 9851 | 2022-04-04 | 2019-03-14 | 3.81 | 3.96 | 3.73 | 4.0 | 0.009 | 1.23 | 0.0 | 0.06 | 17.14 | 0.01 | 2.304 | 5.10 | 1.02 | 16.7 | 83.3 | 0.0 | -6.16 | 0.64 | 0.82 | 1.38 | 4.0 | 0.019 | 1.84 | 1.0 | 0.05 | 18.38 | 0.01 | 1.975 | 18.89 | 0.77 | 12.6 | 87.4 | 0.0 | -3.61 | 0.65 | 0.68 | 0.82 | 1.34 | 7271 | 924 | 11 | 0 | 1 | 0 | 0 | logfile |
✔ | 6UET | 20756 | 2022-04-04 | 2019-09-23 | 4.1 | 4.91 | — | 5.1 | 0.010 | 1.58 | 0.0 | 0.07 | 17.24 | 0.02 | 1.977 | 4.64 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.62 | 0.73 | — | 5.0 | 0.007 | 0.97 | 0.0 | 0.05 | 22.75 | 0.01 | 1.773 | 50.21 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.77 | 0.66 | 0.81 | — | 3869 | 0 | 1 | 119 | 1 | 0 | 1291 | logfile |
✔ | 6iAC | 4435 | 2022-04-04 | 2018-11-26 | 3.9 | 4.05 | — | 4.0 | 0.009 | 1.31 | 0.0 | 0.07 | 12.35 | 0.01 | 2.250 | 5.01 | 1.10 | 12.0 | 87.9 | 0.2 | -4.54 | 0.26 | 0.77 | 1.92 | 4.0 | 0.004 | 0.91 | 0.0 | 0.05 | 16.38 | 0.00 | 2.176 | 12.19 | 1.10 | 8.4 | 91.6 | 0.0 | -0.57 | 1.03 | 0.26 | 0.76 | 1.25 | 8210 | 1057 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6S8H | 10122 | 2022-04-04 | 2019-07-10 | 3.7 | 3.89 | — | 3.8 | 0.011 | 1.65 | 0.0 | 0.26 | 17.60 | 0.01 | 2.300 | 5.75 | 0.12 | 9.9 | 89.8 | 0.2 | -6.48 | 0.67 | 0.83 | 0.98 | 3.8 | 0.003 | 0.99 | 0.0 | 0.09 | 18.39 | 0.01 | 2.147 | 10.37 | 0.87 | 7.3 | 92.6 | 0.1 | -2.12 | 2.13 | 0.67 | 0.83 | 1.18 | 7818 | 959 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 6HV8 | 0287 | 2022-04-04 | 2018-10-10 | 4.4 | 4.51 | — | 4.4 | 0.009 | 1.62 | 2.0 | 0.08 | 10.20 | 0.01 | 1.472 | 8.97 | 1.31 | 22.1 | 77.3 | 0.6 | -4.84 | 0.74 | 0.72 | — | 4.4 | 0.003 | 0.84 | 0.0 | 0.05 | 12.81 | 0.00 | 2.114 | 14.80 | 0.00 | 13.7 | 86.3 | 0.0 | -2.66 | 1.01 | 0.74 | 0.71 | — | 9206 | 1184 | 2 | 0 | 2 | 0 | 0 | logfile |
✔ | 6UES | 20755 | 2022-04-04 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 17.15 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.87 | 0.0 | 0.04 | 21.10 | 0.01 | 1.792 | 36.17 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.34 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✘ | 6J5T | 0680 | 2022-04-04 | 2019-01-12 | 3.4 | 3.94 | — | 3.0 | 0.009 | 1.20 | 0.0 | 0.07 | 11.49 | 0.01 | 1.182 | 7.02 | 0.59 | 11.3 | 88.4 | 0.3 | -4.25 | 0.83 | 0.67 | 0.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53488 | 6640 | 25 | 0 | 15 | 0 | 0 | logfile |
✔ | 6NSK | 0499 | 2022-04-04 | 2019-01-24 | 2.7 | 2.82 | 2.55 | 3.1 | 0.008 | 1.11 | 0.0 | 0.06 | 14.47 | 0.01 | 2.213 | 4.78 | 0.00 | 3.6 | 96.4 | 0.0 | -3.23 | 0.62 | 0.77 | 5.14 | 3.1 | 0.002 | 0.56 | 0.0 | 0.04 | 14.80 | 0.00 | 2.256 | 5.65 | 1.96 | 2.9 | 97.1 | 0.0 | 2.76 | 0.42 | 0.62 | 0.80 | 3.31 | 9096 | 1092 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 6SXA | 10337 | 2022-04-04 | 2019-09-25 | 3.6 | 5.82 | 4.21 | 4.6 | 0.010 | 1.37 | 5.0 | 0.09 | 15.20 | 0.01 | 2.245 | 15.25 | 3.18 | 10.9 | 88.9 | 0.2 | -4.66 | 0.83 | 0.67 | -0.05 | 4.6 | 0.003 | 0.82 | 0.0 | 0.04 | 15.05 | 0.00 | 2.275 | 11.82 | 0.14 | 5.7 | 94.2 | 0.1 | -0.22 | 1.72 | 0.91 | 0.85 | 0.41 | 7014 | 943 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TJo | 10512 | 2022-04-04 | 2019-11-26 | 3.2 | 3.43 | 2.57 | 3.5 | 0.013 | 1.18 | 0.0 | 0.07 | 9.67 | 0.01 | 2.394 | 2.20 | 0.00 | 12.7 | 87.3 | 0.0 | -4.63 | 0.36 | 0.76 | 4.64 | 3.5 | 0.006 | 0.88 | 0.0 | 0.05 | 13.23 | 0.00 | 2.284 | 10.02 | 0.35 | 11.1 | 88.9 | 0.0 | -3.87 | 1.40 | 0.36 | 0.79 | 3.90 | 2439 | 321 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SUF | 10313 | 2022-04-04 | 2019-09-13 | 3.4 | 3.32 | — | 3.3 | 0.021 | 1.77 | 6.0 | 0.10 | 10.78 | 0.01 | 2.186 | 1.71 | 0.00 | 2.4 | 97.3 | 0.3 | -0.46 | 0.80 | 0.80 | 2.93 | 3.3 | 0.008 | 0.86 | 3.0 | 0.04 | 14.94 | 0.01 | 1.861 | 13.37 | 0.09 | 4.2 | 95.7 | 0.0 | 0.23 | 1.31 | 0.82 | 0.84 | 2.71 | 108112 | 13607 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6AV9 | 7007 | 2022-04-04 | 2017-09-01 | 3.9 | 3.83 | — | 3.8 | 0.008 | 1.12 | 0.0 | 0.06 | 12.69 | 0.01 | 1.920 | 37.26 | 0.33 | 12.8 | 86.8 | 0.4 | -4.62 | 0.58 | 0.80 | 2.42 | 3.8 | 0.013 | 1.43 | 1.0 | 0.05 | 16.27 | 0.01 | 2.017 | 22.50 | 0.22 | 10.9 | 88.7 | 0.5 | -2.19 | 1.26 | 0.59 | 0.79 | 1.19 | 8673 | 1101 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6XWQ | 10635 | 2022-04-04 | 2020-01-24 | 3.41 | 4.27 | — | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 13.42 | 0.00 | 2.171 | 10.53 | 0.00 | 3.5 | 96.2 | 0.2 | -2.80 | 0.73 | 0.80 | 0.22 | 4.0 | 0.003 | 0.77 | 0.0 | 0.04 | 15.44 | 0.00 | 2.161 | 13.51 | 0.20 | 3.3 | 96.7 | 0.0 | 1.14 | 1.17 | 0.72 | 0.84 | 0.62 | 9572 | 1281 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6AVB | 7008 | 2022-04-04 | 2017-09-01 | 3.9 | 3.83 | — | 3.8 | 0.009 | 1.13 | 3.0 | 0.06 | 11.81 | 0.01 | 2.072 | 31.04 | 0.00 | 12.9 | 86.8 | 0.3 | -5.00 | 0.58 | 0.79 | 2.72 | 3.8 | 0.013 | 1.48 | 0.0 | 0.05 | 15.45 | 0.01 | 1.693 | 24.30 | 0.00 | 11.3 | 88.7 | 0.0 | -2.30 | 1.70 | 0.58 | 0.80 | 1.83 | 8673 | 1101 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6U2K | 20621 | 2022-04-04 | 2019-08-20 | 2.93 | 3.31 | 3.29 | 3.3 | 0.010 | 0.98 | 0.0 | 0.06 | 10.03 | 0.01 | 2.354 | 3.34 | 0.19 | 9.7 | 90.3 | 0.0 | -4.70 | 0.70 | 0.83 | 4.65 | 3.3 | 0.004 | 0.72 | 0.0 | 0.04 | 15.07 | 0.01 | 2.262 | 7.00 | 2.12 | 8.7 | 91.3 | 0.0 | -1.93 | 1.20 | 0.65 | 0.81 | 2.86 | 4719 | 604 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 5LY6 | 4118 | 2022-04-04 | 2016-09-24 | 4.5 | 4.72 | — | 4.3 | 0.006 | 1.24 | 0.0 | 0.03 | 24.28 | 0.02 | 1.526 | 94.48 | 36.32 | 20.9 | 74.2 | 4.9 | -5.32 | 0.34 | 0.59 | — | 4.4 | 0.004 | 0.81 | 0.0 | 0.04 | 13.96 | 0.00 | 2.167 | 15.68 | 0.24 | 10.2 | 89.3 | 0.4 | -2.62 | 3.61 | 0.40 | 0.77 | — | 3725 | 471 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TNG | 10532 | 2022-04-04 | 2019-12-07 | 4.1 | 4.25 | 3.91 | 4.0 | 0.008 | 1.39 | 0.0 | 0.00 | 8.74 | 0.01 | 2.183 | 11.35 | 0.00 | 18.9 | 80.2 | 0.8 | -5.16 | 0.75 | 0.70 | — | 4.0 | 0.006 | 1.02 | 0.0 | 0.00 | 7.42 | 0.01 | 2.133 | 21.25 | 0.00 | 25.4 | 74.3 | 0.3 | -3.93 | 0.35 | 0.76 | 0.72 | — | 8240 | 2060 | 2 | 0 | 0 | 0 | 0 | logfile |