Table showing results for April 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6oG3	20051	2022-04-04	2019-04-01	4.1	5.37	—	6.5	0.005	1.53	0.0	0.00	0.93	0.00	2.539	0.00	0.00	0.0	99.2	0.8	0.27	0.46	0.48	—	6.0	0.006	1.22	0.0	0.00	8.59	0.00	2.605	57.07	0.00	14.1	85.9	0.0	-1.78	2.19	0.66	0.84	—	1215	396	4	0	9	0	0	logfile
✔	7KPW	22990	2022-04-04	2020-11-12	4.9	5.04	4.74	4.9	0.009	1.54	4.0	0.10	1.89	0.01	2.279	3.61	0.00	3.9	94.9	1.2	4.09	0.75	0.67	—	4.8	0.005	0.86	0.0	0.04	6.91	0.00	2.059	5.41	0.00	14.6	84.8	0.6	-1.66	2.04	0.83	0.83	—	4313	865	1	0	0	0	0	logfile
✔	6RRS	4989	2022-04-08	2019-05-20	3.9	4.30	4.41	3.8	0.013	2.10	0.0	0.00	2.04	0.01	2.364	0.79	0.00	3.9	95.3	0.8	-0.85	0.56	0.64	—	3.8	0.004	0.88	0.0	0.00	7.55	0.00	2.175	1.89	0.00	14.6	85.4	0.0	-1.44	2.05	0.80	0.71	—	93060	23220	180	0	0	0	0	logfile
✔	7JLX	22383	2022-04-04	2020-07-30	4.6	3.86	—	3.7	0.001	0.42	0.0	0.04	3.80	0.00	2.240	2.96	0.00	6.7	93.3	0.0	1.23	0.54	0.51	—	3.8	0.004	0.84	0.0	0.04	7.94	0.00	2.314	8.45	0.00	18.9	81.1	0.0	-3.03	2.40	0.47	0.53	—	3288	664	4	0	0	0	0	logfile
✔	6VQi	21351	2022-04-04	2020-02-05	4.3	4.89	—	4.2	0.005	1.14	0.0	0.05	3.90	0.01	2.327	1.95	0.00	1.3	98.2	0.5	2.16	0.56	0.73	—	4.1	0.002	0.54	0.0	0.03	3.92	0.00	2.243	3.65	0.00	5.4	94.5	0.1	3.11	0.74	0.57	0.74	—	5278	1062	8	0	0	0	0	logfile
✔	6U68	20662	2022-04-05	2019-08-29	4.5	4.54	—	4.5	0.006	0.90	0.0	0.06	4.27	0.00	2.419	0.52	0.00	2.6	97.3	0.1	-3.82	0.71	0.71	—	4.5	0.002	0.74	0.0	0.05	4.16	0.00	2.318	2.42	0.00	3.8	96.2	0.0	-0.64	1.80	0.77	0.81	—	10489	2133	8	0	0	0	0	logfile
✔	7DZY	30921	2022-04-06	2021-01-26	3.6	3.83	3.38	3.1	0.020	2.12	0.0	0.00	4.32	0.01	1.980	3.14	0.00	3.7	95.4	0.9	-0.42	0.43	0.27	—	3.3	0.003	0.85	0.0	0.00	5.31	0.00	2.074	2.81	0.00	11.3	88.5	0.2	-2.84	2.17	0.71	0.71	—	18708	4677	9	0	0	0	0	logfile
✔	7R9U	24331	2022-04-04	2021-06-29	4.4	5.41	—	4.3	0.002	0.34	0.0	0.04	4.36	0.00	2.248	3.50	0.00	9.1	90.3	0.6	-4.49	0.78	0.62	—	4.3	0.003	0.53	0.0	0.04	8.66	0.00	1.913	10.10	0.00	3.8	96.2	0.0	0.26	2.39	0.91	0.84	—	7727	505	1	0	0	0	3939	logfile
✔	7R9E	24324	2022-04-04	2021-06-29	4.0	4.83	—	3.9	0.002	0.37	0.0	0.04	4.45	0.00	2.277	3.11	0.00	9.9	88.7	1.4	-3.58	0.87	0.80	—	3.9	0.002	0.58	0.0	0.04	9.06	0.00	2.156	9.58	0.00	5.2	94.8	0.0	0.03	2.07	0.88	0.82	—	7726	505	1	0	0	0	3938	logfile
✔	7R9o	24330	2022-04-04	2021-06-29	4.0	4.66	—	4.0	0.002	0.38	0.0	0.04	4.49	0.00	2.252	2.85	0.25	10.5	88.7	0.8	-4.93	0.83	0.71	—	4.0	0.003	0.58	0.0	0.04	10.75	0.00	1.956	11.91	0.00	3.8	96.2	0.0	-0.37	3.44	0.88	0.83	—	7726	505	1	0	0	0	3938	logfile
✘	6UXA	20931	2022-04-05	2019-11-07	4.5	5.05	—	6.0	0.005	0.77	0.0	0.06	4.56	0.00	2.628	0.00	0.00	3.8	96.2	0.0	-2.56	0.71	0.63	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10344	2104	8	0	0	0	0	logfile
✘	6UXB	20932	2022-04-05	2019-11-07	4.9	5.50	—	6.0	0.005	0.77	0.0	0.06	4.56	0.00	2.627	0.00	0.00	3.8	96.2	0.0	-2.56	0.74	0.69	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10344	2104	8	0	0	0	0	logfile
✔	7R9K	24328	2022-04-04	2021-06-29	4.1	4.93	—	4.0	0.002	0.35	0.0	0.04	4.65	0.00	2.223	3.24	0.00	10.3	89.1	0.6	-4.05	0.83	0.71	—	4.1	0.002	0.52	0.0	0.04	8.10	0.00	1.907	9.19	0.00	5.0	95.0	0.0	0.38	1.77	0.89	0.83	—	7726	505	1	0	0	0	3938	logfile
✔	6MWQ	9277	2022-04-06	2018-10-30	3.0	3.33	2.89	3.1	0.001	0.36	0.0	0.04	4.66	0.00	2.321	4.19	0.13	11.0	87.5	1.5	-4.81	0.54	0.39	0.22	3.1	0.004	0.75	0.0	0.04	13.37	0.00	2.114	9.31	2.04	4.9	94.9	0.2	-1.32	1.34	0.78	0.86	1.93	22072	2873	8	0	0	0	0	logfile
✔	6PWC	20505	2022-04-04	2019-07-22	4.9	5.55	—	4.5	0.003	0.67	0.0	0.05	4.68	0.01	2.345	2.19	0.00	1.3	98.7	0.0	-0.09	0.61	0.67	—	4.6	0.003	0.71	0.0	0.04	6.38	0.00	2.135	12.03	0.00	6.0	94.0	0.0	-0.57	2.41	0.61	0.58	—	5879	1055	5	0	0	0	0	logfile
✔	7R9M	24329	2022-04-04	2021-06-29	4.0	4.58	—	3.9	0.002	0.38	0.0	0.04	4.68	0.00	2.214	3.88	0.00	8.3	90.9	0.8	-4.83	0.85	0.77	—	3.9	0.002	0.55	0.0	0.04	9.36	0.00	2.104	9.45	0.00	3.4	96.6	0.0	-0.01	1.74	0.86	0.79	—	7727	505	1	0	0	0	3939	logfile
✔	6RLB	4918	2022-04-06	2019-05-01	4.5	4.85	4.49	4.3	0.007	0.95	0.0	0.06	4.70	0.00	2.082	0.71	0.00	4.0	95.9	0.0	-1.08	0.80	0.63	—	4.2	0.003	0.72	0.0	0.04	5.19	0.00	2.243	3.44	0.00	11.3	88.6	0.0	-0.76	1.85	0.86	0.66	—	20407	4122	14	0	0	0	0	logfile
✔	7DZW	30915	2022-04-05	2021-01-26	3.45	4.19	3.55	3.3	0.019	2.27	0.0	0.00	4.81	0.01	2.240	2.28	0.00	5.1	93.3	1.6	-1.27	0.44	0.25	—	3.3	0.004	0.92	0.0	0.00	6.11	0.00	2.144	5.08	0.00	15.8	84.1	0.1	-2.69	2.06	0.77	0.73	—	13452	3363	3	0	0	0	0	logfile
✔	5N6W	3595	2022-04-09	2017-02-16	4.2	4.31	—	4.2	0.001	0.36	0.0	0.04	4.92	0.00	2.309	3.73	0.00	17.7	79.7	2.6	-5.61	0.44	0.27	—	4.2	0.021	1.61	1.0	0.04	10.59	0.01	1.586	23.47	0.04	11.8	87.5	0.6	-4.11	1.47	0.68	0.64	—	40752	2512	16	0	0	0	20032	logfile
✔	7N95	24250	2022-04-04	2021-06-16	4.1	3.45	—	2.1	0.002	0.74	0.0	0.00	5.05	0.00	2.573	0.10	0.00	7.1	92.3	0.6	-1.14	0.78	0.70	—	2.1	0.003	0.89	0.0	0.00	3.97	0.00	2.552	3.52	0.00	14.4	85.4	0.2	-2.79	1.72	0.84	0.81	—	7299	2433	2	0	0	0	0	logfile

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