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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZiR | 14738 | 2023-02-16 | 2022-04-08 | 2.5 | 2.51 | 2.04 | 2.7 | 0.002 | 0.34 | 0.0 | 0.03 | 9.02 | 0.00 | 2.317 | 1.65 | 0.00 | 2.0 | 98.0 | 0.0 | -3.82 | 0.48 | 0.90 | 7.46 | 2.7 | 0.003 | 0.46 | 0.0 | 0.04 | 12.12 | 0.00 | 2.316 | 0.28 | 0.00 | 2.9 | 97.1 | 0.0 | -3.83 | 1.03 | 0.50 | 0.93 | 7.96 | 2120 | 255 | 10 | 0 | 0 | 50 | 0 | logfile |
✔ | 7JG8 | 22314 | 2023-02-23 | 2020-07-18 | 3.3 | 2.35 | 3.37 | 3.3 | 0.009 | 1.50 | 0.0 | 0.20 | 7.20 | 0.01 | 2.424 | 0.51 | 0.00 | 3.2 | 96.6 | 0.2 | -1.30 | 0.62 | 0.55 | — | 3.4 | 0.003 | 0.87 | 0.0 | 0.08 | 5.72 | 0.00 | 2.277 | 0.43 | 0.00 | 9.5 | 90.4 | 0.1 | -0.84 | 1.26 | 0.72 | 0.70 | — | 19573 | 4827 | 26 | 0 | 7 | 0 | 0 | logfile |
✔ | 7NCA | 12264 | 2023-02-19 | 2021-01-28 | 3.47 | 3.58 | 3.04 | 3.6 | 0.012 | 2.04 | 0.0 | 0.08 | 10.64 | 0.01 | 2.645 | 0.00 | 0.19 | 5.5 | 94.5 | 0.0 | -2.04 | 0.73 | 0.85 | 4.45 | 3.7 | 0.002 | 0.49 | 0.0 | 0.05 | 12.94 | 0.00 | 2.433 | 0.77 | 0.39 | 2.7 | 97.3 | 0.0 | -2.96 | 0.76 | 0.69 | 0.85 | 3.43 | 10428 | 732 | 12 | 0 | 0 | 0 | 5376 | logfile |
✔ | 7MJP | 23881 | 2023-02-21 | 2021-04-20 | 4.2 | 4.40 | — | 4.3 | 0.007 | 1.11 | 0.0 | 0.07 | 7.09 | 0.01 | 1.477 | 2.76 | 0.00 | 9.1 | 90.9 | 0.0 | -1.16 | 0.51 | 0.65 | — | 4.4 | 0.002 | 0.59 | 0.0 | 0.04 | 5.47 | 0.00 | 2.285 | 0.87 | 0.00 | 6.8 | 93.2 | 0.0 | -0.36 | 0.44 | 0.56 | 0.69 | — | 14163 | 2818 | 10 | 0 | 8 | 0 | 0 | logfile |
✔ | 7QV5 | 14167 | 2023-02-17 | 2022-01-19 | 3.0 | 3.03 | 1.88 | 3.0 | 0.010 | 0.44 | 0.0 | 0.06 | 9.44 | 0.00 | 2.689 | 1.08 | 0.00 | 6.2 | 93.8 | 0.0 | -2.64 | 0.46 | 0.86 | 7.89 | 3.1 | 0.002 | 0.35 | 0.0 | 0.06 | 12.33 | 0.00 | 2.576 | 1.08 | 0.00 | 1.0 | 99.0 | 0.0 | -1.49 | 0.87 | 0.50 | 0.90 | 6.84 | 5562 | 342 | 27 | 0 | 18 | 0 | 2997 | logfile |
✔ | 6UVS | 20915 | 2023-02-22 | 2019-11-04 | 4.2 | 4.33 | — | 4.2 | 0.010 | 1.17 | 0.0 | 0.06 | 9.04 | 0.01 | 2.148 | 2.19 | 0.00 | 16.0 | 84.0 | 0.0 | -4.91 | 0.68 | 0.79 | — | 4.2 | 0.002 | 0.62 | 0.0 | 0.04 | 9.23 | 0.01 | 1.899 | 1.10 | 0.00 | 7.2 | 92.8 | 0.0 | 2.03 | 0.86 | 0.73 | 0.85 | — | 17040 | 1920 | 12 | 0 | 0 | 0 | 5976 | logfile |
✔ | 6QPi | 4614 | 2023-02-16 | 2019-02-14 | 3.3 | 3.37 | 2.73 | 3.4 | 0.005 | 0.70 | 0.0 | 0.04 | 6.59 | 0.01 | 2.432 | 2.09 | 0.00 | 1.4 | 98.6 | 0.0 | -3.02 | 0.39 | 0.62 | — | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 5.28 | 0.00 | 2.448 | 1.19 | 0.00 | 2.6 | 97.4 | 0.0 | 1.11 | 0.59 | 0.41 | 0.64 | — | 2288 | 462 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JG6 | 22312 | 2023-02-23 | 2020-07-18 | 3.7 | 2.39 | 3.79 | 2.2 | 0.008 | 1.40 | 0.0 | 0.00 | 6.55 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 97.0 | 0.1 | -0.59 | 0.62 | 0.54 | — | 2.3 | 0.004 | 0.91 | 0.0 | 0.00 | 5.77 | 0.00 | 2.225 | 1.33 | 0.00 | 12.8 | 87.2 | 0.0 | -0.80 | 1.65 | 0.70 | 0.68 | — | 19320 | 4819 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 7SQV | 25396 | 2023-02-17 | 2021-11-06 | 2.3 | 2.95 | 2.29 | 2.8 | 0.001 | 0.38 | 0.0 | 0.04 | 16.08 | 0.00 | 2.314 | 1.47 | 0.63 | 0.7 | 99.3 | 0.0 | 1.86 | 0.76 | 0.88 | 3.59 | 2.8 | 0.003 | 0.47 | 0.0 | 0.04 | 16.30 | 0.00 | 2.295 | 1.36 | 1.67 | 1.1 | 98.9 | 0.0 | 1.71 | 1.99 | 0.77 | 0.90 | 3.84 | 4471 | 573 | 5 | 0 | 0 | 7 | 0 | logfile |
✔ | 7SC0 | 25007 | 2023-02-20 | 2021-09-26 | 3.4 | 3.72 | — | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 10.01 | 0.00 | 2.479 | 1.29 | 0.00 | 7.9 | 92.1 | 0.0 | -2.84 | 0.69 | 0.81 | 2.75 | 3.8 | 0.003 | 0.59 | 0.0 | 0.04 | 14.15 | 0.00 | 2.371 | 1.37 | 0.54 | 9.0 | 90.2 | 0.8 | -0.63 | 1.49 | 0.68 | 0.82 | 2.11 | 11638 | 1419 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6L3U | 0826 | 2023-02-23 | 2019-10-15 | 2.53 | 2.59 | 2.48 | 2.6 | 0.010 | 0.96 | 0.0 | 0.05 | 16.88 | 0.01 | 2.206 | 0.45 | 3.01 | 1.9 | 98.1 | 0.0 | -2.86 | 0.64 | 0.84 | 4.02 | 2.6 | 0.002 | 0.53 | 0.0 | 0.03 | 16.80 | 0.00 | 2.099 | 1.40 | 1.31 | 0.3 | 99.7 | 0.0 | 2.60 | 2.33 | 0.63 | 0.86 | 2.92 | 19698 | 1206 | 18 | 0 | 12 | 174 | 9588 | logfile |
✔ | 7QV6 | 14168 | 2023-02-17 | 2022-01-19 | 3.5 | 3.33 | 3.32 | 3.5 | 0.011 | 0.59 | 0.0 | 0.05 | 11.56 | 0.00 | 2.480 | 1.86 | 0.00 | 1.1 | 98.9 | 0.0 | -1.85 | 0.39 | 0.86 | 5.72 | 3.5 | 0.002 | 0.39 | 0.0 | 0.06 | 11.93 | 0.00 | 2.389 | 1.45 | 0.00 | 0.0 | 100.0 | 0.0 | 0.74 | 0.46 | 0.40 | 0.86 | 5.96 | 4842 | 306 | 18 | 0 | 0 | 0 | 2556 | logfile |
✔ | 6SH4 | 10193 | 2023-02-20 | 2019-08-05 | 4.4 | 4.48 | — | 4.3 | 0.005 | 1.01 | 0.0 | 0.07 | 5.13 | 0.00 | 2.405 | 2.99 | 0.00 | 6.8 | 92.4 | 0.8 | -2.94 | 0.72 | 0.77 | — | 4.3 | 0.003 | 0.69 | 0.0 | 0.04 | 4.47 | 0.00 | 2.243 | 1.49 | 0.00 | 7.0 | 92.8 | 0.2 | 0.09 | 2.27 | 0.74 | 0.83 | — | 12957 | 2632 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7F92 | 31495 | 2023-02-23 | 2021-07-03 | 3.1 | 3.23 | 3.05 | 3.2 | 0.008 | 1.29 | 0.0 | 0.05 | 16.75 | 0.01 | 2.271 | 0.63 | 2.29 | 3.0 | 97.0 | 0.0 | -6.40 | 0.75 | 0.90 | 3.09 | 3.2 | 0.002 | 0.52 | 0.0 | 0.03 | 15.14 | 0.00 | 2.314 | 1.51 | 0.19 | 1.2 | 98.8 | 0.0 | 1.49 | 0.34 | 0.73 | 0.90 | 2.54 | 21240 | 2352 | 36 | 0 | 132 | 264 | 0 | logfile |
✔ | 7UXU | 26862 | 2023-02-18 | 2022-05-06 | 2.74 | 3.09 | 2.80 | 3.1 | 0.007 | 1.01 | 0.0 | 0.06 | 14.12 | 0.01 | 2.519 | 0.00 | 0.00 | 1.9 | 98.1 | 0.0 | -0.46 | 0.58 | 0.88 | 5.36 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 16.52 | 0.00 | 2.133 | 1.60 | 0.62 | 1.7 | 98.3 | 0.0 | 0.38 | 1.29 | 0.54 | 0.86 | 4.10 | 8776 | 536 | 8 | 0 | 4 | 0 | 4268 | logfile |
✔ | 7UL5 | 26592 | 2023-02-17 | 2022-04-03 | 3.1 | 3.32 | 3.08 | 3.3 | 0.004 | 0.64 | 0.0 | 0.04 | 11.76 | 0.01 | 2.404 | 3.68 | 0.00 | 3.1 | 96.9 | 0.0 | -1.07 | 0.64 | 0.85 | 3.67 | 3.3 | 0.003 | 0.52 | 0.0 | 0.04 | 13.33 | 0.00 | 2.337 | 1.84 | 0.37 | 1.7 | 98.3 | 0.0 | 2.87 | 0.30 | 0.64 | 0.86 | 3.19 | 2773 | 371 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oJG | 12950 | 2023-02-20 | 2021-05-14 | 3.4 | 3.72 | — | 3.8 | 0.025 | 2.60 | 0.0 | 0.07 | 24.74 | 0.01 | 1.340 | 2.85 | 0.00 | 1.5 | 98.5 | 0.0 | -2.38 | 0.63 | 0.83 | 3.66 | 3.8 | 0.003 | 0.64 | 0.0 | 0.05 | 18.53 | 0.00 | 2.247 | 1.87 | 0.62 | 3.1 | 96.9 | 0.0 | -0.82 | 0.41 | 0.58 | 0.81 | 3.00 | 13255 | 1518 | 22 | 0 | 66 | 0 | 0 | logfile |
✔ | 7QKW | 14055 | 2023-02-17 | 2021-12-19 | 2.32 | 1.74 | 2.60 | 2.3 | 0.010 | 1.93 | 1.0 | 0.10 | 13.53 | 0.01 | 2.534 | 0.00 | 0.00 | 5.4 | 94.6 | 0.0 | -2.79 | 0.41 | 0.81 | 7.02 | 2.3 | 0.002 | 0.50 | 0.0 | 0.05 | 16.64 | 0.00 | 2.420 | 1.91 | 2.54 | 4.4 | 95.6 | 0.0 | -2.76 | 1.36 | 0.41 | 0.84 | 5.96 | 4707 | 306 | 6 | 0 | 0 | 0 | 2439 | logfile |
✔ | 7QUN | 14149 | 2023-02-23 | 2022-01-18 | 2.1 | 2.22 | — | 2.2 | 0.005 | 0.72 | 0.0 | 0.05 | 14.59 | 0.00 | 2.230 | 4.55 | 0.88 | 2.1 | 97.9 | 0.0 | 0.29 | 0.63 | 0.77 | 5.98 | 2.2 | 0.003 | 0.65 | 0.0 | 0.05 | 14.92 | 0.00 | 2.281 | 1.94 | 0.78 | 2.0 | 98.0 | 0.0 | 0.15 | 0.24 | 0.74 | 0.86 | 6.21 | 21094 | 2773 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7RXB | 24727 | 2023-02-18 | 2021-08-22 | 3.07 | 3.22 | — | 3.2 | 0.009 | 1.15 | 0.0 | 0.05 | 14.60 | 0.01 | 2.437 | 0.72 | 0.00 | 6.0 | 94.0 | 0.0 | -4.88 | 0.67 | 0.89 | 3.48 | 3.2 | 0.002 | 0.53 | 0.0 | 0.04 | 14.48 | 0.00 | 2.379 | 1.98 | 0.00 | 5.2 | 94.8 | 0.0 | -0.20 | 0.26 | 0.63 | 0.88 | 3.17 | 8506 | 1096 | 4 | 0 | 8 | 0 | 0 | logfile |