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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5FN5 | 3240 | 2024-04-07 | 2015-11-10 | 4.3 | 4.62 | — | 4.3 | 0.012 | 1.85 | 28.0 | 0.11 | 18.82 | 0.01 | 2.074 | 13.59 | 14.00 | 11.4 | 84.3 | 4.3 | -1.91 | 0.65 | 0.62 | — | 4.3 | 0.004 | 0.83 | 0.0 | 0.04 | 13.87 | 0.01 | 2.105 | 22.16 | 0.00 | 9.3 | 90.0 | 0.7 | -0.69 | 1.02 | 0.70 | 0.79 | — | 9645 | 1227 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6B40 | 7046 | 2024-04-09 | 2017-09-25 | 4.3 | 4.48 | — | 4.4 | 0.007 | 1.13 | 0.0 | 0.06 | 16.85 | 0.01 | 2.269 | 8.08 | 0.00 | 18.8 | 81.0 | 0.2 | -5.22 | 0.76 | 0.70 | — | 4.4 | 0.003 | 0.79 | 0.0 | 0.04 | 17.68 | 0.00 | 2.029 | 17.59 | 0.00 | 16.7 | 83.3 | 0.0 | -3.15 | 2.11 | 0.80 | 0.77 | — | 16202 | 1800 | 12 | 100 | 42 | 0 | 0 | logfile |
✘ | 7JN4 | 22401 | 2024-04-15 | 2020-08-03 | 2.68 | 2.77 | — | 2.7 | 0.013 | 1.22 | 8.0 | 0.08 | 10.93 | 0.01 | 2.229 | 5.48 | 1.33 | 2.9 | 97.1 | 0.0 | -3.84 | 0.78 | 0.85 | 5.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35712 | 4520 | 32 | 0 | 0 | 232 | 0 | logfile |
✔ | 5J8V | 8073 | 2024-04-11 | 2016-04-08 | 4.9 | 4.81 | — | 4.7 | 0.024 | 2.67 | 214.0 | 0.16 | 10.17 | 0.01 | 1.145 | 73.68 | 28.71 | 6.2 | 86.5 | 7.3 | 2.50 | 0.71 | 0.67 | — | 4.7 | 0.003 | 0.94 | 0.0 | 0.04 | 9.04 | 0.00 | 2.223 | 6.51 | 0.63 | 12.6 | 85.4 | 2.0 | -1.65 | 0.84 | 0.75 | 0.74 | — | 73616 | 13812 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZN2 | 14799 | 2024-04-13 | 2022-04-20 | 4.29 | 3.73 | 4.16 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 13.12 | 0.00 | 2.048 | 7.87 | 0.00 | 3.5 | 96.5 | 0.0 | -1.30 | 0.80 | 0.72 | — | 3.3 | 0.004 | 0.62 | 0.0 | 0.04 | 13.04 | 0.00 | 2.091 | 13.42 | 0.00 | 3.7 | 96.3 | 0.0 | -0.93 | 2.06 | 0.84 | 0.80 | — | 89393 | 11481 | 36 | 0 | 0 | 0 | 0 | logfile |
✘ | 6RW6 | 10033 | 2024-04-15 | 2019-06-04 | 2.75 | 2.81 | — | 2.7 | 0.011 | 0.96 | 0.0 | 0.06 | 9.75 | 0.01 | 2.148 | 4.16 | 0.00 | 2.2 | 97.8 | 0.0 | -3.68 | 0.85 | 0.87 | 4.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 98645 | 12425 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 7QHo | 13977 | 2024-04-14 | 2021-12-13 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 93446 | 5870 | 54 | 0 | 78 | 10 | 44952 | logfile |
✘ | 6RBD | 4792 | 2024-04-12 | 2019-04-10 | 3.47 | 3.74 | 3.51 | 2.5 | 0.006 | 0.97 | 0.0 | 0.05 | 22.06 | 0.01 | 2.223 | 6.31 | 0.28 | 5.3 | 94.6 | 0.0 | -3.01 | 0.90 | 0.81 | 1.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 81048 | 5450 | 35 | 1777 | 0 | 0 | 0 | logfile |
✘ | 7E8H | 31019 | 2024-04-17 | 2021-03-01 | 4.5 | 4.06 | 4.44 | 3.7 | 0.002 | 0.62 | 0.0 | 0.04 | 14.21 | 0.00 | 2.089 | 18.26 | 0.00 | 6.9 | 93.0 | 0.1 | -0.78 | 0.73 | 0.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 44894 | 5576 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RPW | 24624 | 2024-04-07 | 2021-08-04 | 4.38 | 4.64 | — | 4.4 | 0.003 | 0.57 | 0.0 | 0.04 | 19.29 | 0.00 | 1.756 | 18.05 | 9.97 | 11.3 | 88.6 | 0.1 | -2.82 | 0.77 | 0.68 | — | 4.4 | 0.004 | 0.70 | 0.0 | 0.05 | 18.85 | 0.00 | 1.078 | 20.80 | 0.00 | 12.6 | 87.4 | 0.1 | -3.21 | 3.74 | 0.77 | 0.68 | — | 10594 | 1179 | 10 | 62 | 5 | 0 | 0 | logfile |
✔ | 7U2A | 26310 | 2024-04-06 | 2022-02-23 | 4.1 | 3.51 | — | 4.0 | 0.010 | 1.05 | 0.0 | 0.05 | 18.07 | 0.00 | 1.918 | 11.25 | 0.31 | 0.5 | 99.5 | 0.0 | 2.04 | 0.59 | 0.61 | — | 4.0 | 0.004 | 0.72 | 0.0 | 0.04 | 17.87 | 0.01 | 2.138 | 16.31 | 0.00 | 2.9 | 97.1 | 0.0 | -0.16 | 1.06 | 0.66 | 0.73 | — | 6855 | 761 | 5 | 38 | 2 | 0 | 0 | logfile |
✔ | 6PP6 | 20420 | 2024-04-14 | 2019-07-05 | 4.28 | 4.54 | — | 4.3 | 0.004 | 0.71 | 0.0 | 0.04 | 12.43 | 0.00 | 2.179 | 3.17 | 0.00 | 0.6 | 99.4 | 0.0 | -1.13 | 0.79 | 0.78 | — | 4.3 | 0.002 | 0.53 | 0.0 | 0.04 | 12.60 | 0.00 | 1.987 | 9.45 | 0.00 | 3.2 | 96.8 | 0.0 | -0.16 | 1.50 | 0.81 | 0.81 | — | 32106 | 2062 | 13 | 0 | 12 | 0 | 16126 | logfile |
✔ | 8DS6 | 27684 | 2024-04-07 | 2022-07-21 | 4.9 | 4.18 | 4.54 | 3.7 | 0.012 | 1.43 | 0.0 | 0.06 | 10.65 | 0.01 | 2.494 | 0.39 | 0.00 | 1.4 | 98.6 | 0.0 | 1.06 | 0.85 | 0.67 | — | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 11.45 | 0.01 | 2.212 | 9.28 | 0.00 | 2.3 | 97.7 | 0.0 | 1.68 | 1.09 | 0.85 | 0.63 | — | 10135 | 669 | 2 | 0 | 0 | 0 | 5107 | logfile |
✔ | 8BGU | 16036 | 2024-04-05 | 2022-10-28 | 4.1 | 5.77 | 3.97 | 4.0 | 0.003 | 0.84 | 0.0 | 0.04 | 23.47 | 0.00 | 2.235 | 4.09 | 0.00 | 5.0 | 95.0 | 0.0 | -2.58 | 0.92 | 0.86 | — | 4.0 | 0.003 | 0.59 | 0.0 | 0.03 | 23.78 | 0.00 | 2.103 | 20.33 | 0.00 | 8.8 | 91.2 | 0.0 | -0.76 | 2.44 | 0.92 | 0.87 | — | 4779 | 447 | 5 | 121 | 1 | 0 | 0 | logfile |
✘ | 7PM4 | 13520 | 2024-04-08 | 2021-09-01 | 2.49 | 2.26 | — | 2.5 | 0.003 | 0.56 | 0.0 | 0.04 | 16.86 | 0.00 | 2.237 | 4.75 | 1.06 | 4.9 | 95.1 | 0.0 | 0.76 | 0.79 | 0.88 | 5.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14288 | 1724 | 12 | 0 | 8 | 60 | 0 | logfile |
✔ | 7NPU | 12521 | 2024-04-10 | 2021-02-28 | 4.48 | 4.74 | 4.43 | 3.8 | 0.008 | 1.19 | 0.0 | 0.06 | 11.87 | 0.01 | 2.086 | 1.37 | 0.37 | 1.8 | 98.1 | 0.1 | -0.61 | 0.66 | 0.68 | — | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 12.52 | 0.00 | 1.928 | 8.00 | 0.00 | 2.7 | 97.3 | 0.0 | 1.77 | 3.28 | 0.69 | 0.76 | — | 126727 | 8230 | 24 | 0 | 0 | 0 | 64397 | logfile |
✔ | 7RZ9 | 24755 | 2024-04-13 | 2021-08-27 | 4.15 | 3.58 | — | 4.1 | 0.007 | 0.98 | 0.0 | 0.05 | 10.41 | 0.01 | 2.264 | 3.46 | 0.26 | 5.6 | 94.4 | 0.0 | -5.15 | 0.68 | 0.80 | — | 4.1 | 0.003 | 0.60 | 0.0 | 0.04 | 12.97 | 0.00 | 2.188 | 8.60 | 0.00 | 3.9 | 96.1 | 0.0 | -0.12 | 1.42 | 0.70 | 0.78 | — | 27934 | 3550 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 8FE1 | 29019 | 2024-04-09 | 2022-12-05 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15445 | 1772 | 10 | 0 | 48 | 0 | 0 | logfile |
✔ | 7W0F | 32241 | 2024-04-08 | 2021-11-18 | 4.55 | 8.43 | — | 7.5 | 0.003 | 0.64 | 1.0 | 0.04 | 17.27 | 0.00 | 1.356 | 21.15 | 1.19 | 4.4 | 94.7 | 0.8 | -0.94 | 0.71 | 0.38 | — | 7.3 | 0.003 | 0.71 | 0.0 | 0.04 | 17.30 | 0.00 | 2.139 | 24.93 | 0.07 | 6.2 | 93.7 | 0.1 | -1.01 | 1.51 | 0.87 | 0.72 | — | 14097 | 1492 | 6 | 94 | 0 | 0 | 0 | logfile |
✘ | 6ZKC | 11244 | 2024-04-09 | 2020-06-30 | 3.1 | 3.23 | — | 3.2 | 0.008 | 1.02 | 0.0 | 1.02 | 12.40 | 0.01 | 2.216 | 5.53 | 0.10 | 4.2 | 95.8 | 0.0 | -3.11 | 0.66 | 0.83 | 3.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67967 | 8227 | 71 | 0 | 45 | 0 | 0 | logfile |