The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QP6 | 14113 | 2024-04-06 | 2022-01-03 | 4.7 | 4.90 | 4.71 | 4.6 | 0.011 | 1.51 | 51.0 | 0.10 | 21.77 | 0.02 | 2.016 | 10.57 | 5.29 | 4.4 | 95.3 | 0.3 | -1.97 | 0.76 | 0.71 | — | 4.6 | 0.005 | 0.82 | 0.0 | 0.04 | 21.03 | 0.01 | 1.913 | 24.65 | 0.03 | 7.2 | 92.8 | 0.1 | -0.96 | 0.99 | 0.80 | 0.82 | — | 109900 | 9873 | 57 | 1814 | 4 | 0 | 0 | logfile |
✘ | 5oQJ | 3846 | 2024-04-07 | 2017-08-11 | 4.7 | 4.68 | — | 4.2 | 0.007 | 0.54 | 0.0 | 0.04 | 12.58 | 0.00 | 1.336 | 7.82 | 0.30 | 6.5 | 92.3 | 1.2 | -3.41 | 0.70 | 0.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62931 | 7649 | 43 | 148 | 557 | 0 | 0 | logfile |
✔ | 8PDN | 17615 | 2024-04-15 | 2023-06-12 | 4.7 | 4.94 | 4.72 | 4.7 | 0.007 | 0.66 | 0.0 | 0.04 | 15.88 | 0.00 | 0.984 | 15.88 | 0.00 | 1.5 | 98.5 | 0.0 | 0.42 | 0.64 | 0.57 | — | 4.7 | 0.004 | 0.81 | 0.0 | 0.04 | 15.86 | 0.01 | 1.799 | 20.03 | 0.00 | 1.5 | 98.5 | 0.0 | 0.61 | 3.80 | 0.70 | 0.66 | — | 33228 | 4068 | 24 | 84 | 0 | 0 | 0 | logfile |
✔ | 3J8i | 6179 | 2024-04-08 | 2014-11-06 | 4.7 | 4.79 | — | 4.7 | 0.018 | 1.67 | 0.0 | 0.11 | 19.47 | 0.01 | 2.125 | 76.17 | 14.53 | 6.4 | 87.5 | 6.1 | -1.59 | 0.66 | 0.76 | — | 4.7 | 0.003 | 0.88 | 0.0 | 0.04 | 14.41 | 0.00 | 2.094 | 16.30 | 0.00 | 9.4 | 89.8 | 0.8 | -1.91 | 1.28 | 0.64 | 0.71 | — | 14800 | 1875 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 6PPi | 20437 | 2024-04-16 | 2019-07-07 | 4.7 | 4.29 | — | 4.1 | 0.003 | 0.71 | 0.0 | 0.05 | 9.20 | 0.01 | 2.302 | 4.20 | 0.00 | 4.9 | 95.1 | 0.0 | -4.79 | 0.55 | 0.78 | — | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 12.95 | 0.01 | 2.109 | 20.47 | 0.00 | 4.9 | 95.1 | 0.0 | -1.60 | 1.14 | 0.58 | 0.81 | — | 39504 | 4956 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 7oWG | 13097 | 2024-04-07 | 2021-06-18 | 4.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 114114 | 7078 | 8 | 0 | 110 | 0 | 57040 | logfile |
✔ | 4V1W | 2788 | 2024-04-14 | 2014-10-02 | 4.7 | 4.69 | — | 4.7 | 0.020 | 2.45 | 172.0 | 0.17 | 18.97 | 0.01 | 2.533 | 7.94 | 7.67 | 3.0 | 96.5 | 0.6 | -2.40 | 0.74 | 0.84 | — | 4.6 | 0.003 | 0.80 | 0.0 | 0.04 | 17.57 | 0.00 | 2.213 | 17.43 | 0.69 | 3.0 | 97.0 | 0.0 | 1.92 | 2.68 | 0.75 | 0.79 | — | 32736 | 4080 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 5ZAL | 6905 | 2024-04-08 | 2018-02-07 | 4.7 | 4.44 | — | 3.8 | 0.008 | 1.44 | 1.0 | 0.07 | 15.07 | 0.01 | 2.215 | 19.06 | 0.97 | 16.1 | 83.2 | 0.7 | -5.19 | 0.87 | 0.74 | — | 3.8 | 0.003 | 0.84 | 0.0 | 0.05 | 15.04 | 0.01 | 2.110 | 26.45 | 0.00 | 13.4 | 86.3 | 0.2 | -2.86 | 0.84 | 0.84 | 0.61 | — | 12346 | 1389 | 3 | 58 | 0 | 0 | 0 | logfile |
✔ | 8GTD | 34250 | 2024-04-13 | 2022-09-08 | 4.7 | 4.27 | 4.25 | 4.2 | 0.014 | 2.16 | 0.0 | 0.00 | 5.49 | 0.01 | 2.285 | 3.73 | 0.00 | 8.4 | 90.0 | 1.6 | 0.41 | 0.50 | 0.44 | — | 4.2 | 0.004 | 0.93 | 0.0 | 0.00 | 6.20 | 0.00 | 2.228 | 4.76 | 0.00 | 19.1 | 80.2 | 0.7 | -2.63 | 1.26 | 0.52 | 0.51 | — | 29580 | 7392 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8T5C | 41048 | 2024-04-08 | 2023-06-13 | 4.7 | 4.69 | 4.43 | 4.5 | 0.005 | 0.84 | 0.0 | 0.05 | 20.84 | 0.01 | 2.044 | 5.82 | 1.11 | 13.5 | 85.9 | 0.6 | -2.26 | 0.74 | 0.72 | — | 4.5 | 0.003 | 0.85 | 0.0 | 0.05 | 13.86 | 0.00 | 2.147 | 19.01 | 0.00 | 14.9 | 84.6 | 0.5 | -2.38 | 1.79 | 0.78 | 0.78 | — | 14189 | 1651 | 35 | 0 | 91 | 0 | 0 | logfile |
✔ | 7TK8 | 25960 | 2024-04-10 | 2022-01-17 | 4.7 | 7.79 | 12.86 | 4.4 | 0.019 | 2.21 | 0.0 | 0.00 | 6.68 | 0.01 | 2.390 | 0.08 | 0.00 | 4.1 | 94.4 | 1.5 | -0.46 | 0.60 | 0.62 | — | 4.4 | 0.007 | 1.06 | 0.0 | 0.00 | 6.46 | 0.01 | 1.965 | 24.73 | 0.00 | 11.5 | 88.2 | 0.3 | -0.96 | 1.58 | 0.81 | 0.81 | — | 20227 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y5C | 33616 | 2024-04-15 | 2022-06-16 | 4.7 | 4.41 | 4.64 | 4.1 | 0.003 | 0.60 | 0.0 | 0.04 | 14.53 | 0.00 | 1.916 | 9.62 | 0.00 | 2.6 | 97.4 | 0.0 | 1.08 | 0.77 | 0.73 | — | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 14.04 | 0.00 | 1.859 | 10.77 | 0.00 | 3.1 | 96.9 | 0.0 | 1.04 | 1.19 | 0.77 | 0.75 | — | 35993 | 4851 | 26 | 0 | 11 | 0 | 0 | logfile |
✘ | 3JC5 | 6535 | 2024-04-16 | 2015-11-24 | 4.7 | 5.02 | — | 4.8 | 0.009 | 1.54 | 5.0 | 0.06 | 12.17 | 0.01 | 0.300 | 46.29 | 0.63 | 9.4 | 88.9 | 1.7 | -4.21 | 0.76 | 0.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40041 | 5039 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UXV | 20933 | 2024-04-09 | 2019-11-08 | 4.7 | 4.98 | — | 4.7 | 0.006 | 0.88 | 0.0 | 0.05 | 15.16 | 0.01 | 1.532 | 29.48 | 0.48 | 17.7 | 82.1 | 0.3 | -5.06 | 0.80 | 0.81 | — | 4.7 | 0.003 | 0.77 | 0.0 | 0.04 | 14.37 | 0.00 | 2.144 | 16.16 | 0.06 | 10.8 | 89.1 | 0.1 | -0.84 | 0.73 | 0.79 | 0.79 | — | 16649 | 1920 | 15 | 0 | 273 | 0 | 0 | logfile |
✔ | 7QY7 | 14209 | 2024-04-15 | 2022-01-27 | 4.7 | 5.28 | — | 4.8 | 0.007 | 1.21 | 6.0 | 0.06 | 11.96 | 0.01 | 1.015 | 21.97 | 1.70 | 10.3 | 88.9 | 0.8 | -4.62 | 0.85 | 0.74 | — | 4.8 | 0.004 | 0.77 | 0.0 | 0.04 | 12.64 | 0.00 | 1.999 | 25.87 | 0.05 | 10.1 | 89.7 | 0.1 | -1.52 | 0.94 | 0.87 | 0.81 | — | 99911 | 12865 | 51 | 0 | 6 | 0 | 0 | logfile |
✔ | 6WB1 | 21584 | 2024-04-06 | 2020-03-26 | 4.7 | 4.87 | — | 4.6 | 0.002 | 0.50 | 0.0 | 0.04 | 17.21 | 0.00 | 2.204 | 7.21 | 0.55 | 4.5 | 95.4 | 0.1 | -4.82 | 0.86 | 0.80 | — | 4.6 | 0.003 | 0.61 | 0.0 | 0.04 | 17.45 | 0.00 | 2.158 | 10.78 | 0.00 | 4.9 | 95.1 | 0.0 | -0.78 | 0.75 | 0.88 | 0.84 | — | 8235 | 944 | 4 | 75 | 0 | 0 | 0 | logfile |
✘ | 6JSi | 9882 | 2024-04-07 | 2019-04-08 | 4.7 | 4.70 | — | 4.6 | 0.007 | 1.48 | 0.0 | 0.06 | 15.33 | 0.01 | 2.231 | 10.68 | 2.42 | 23.2 | 72.3 | 4.5 | -6.05 | 0.64 | 0.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62820 | 5844 | 9 | 0 | 4044 | 0 | 0 | logfile |
✔ | 8oDV | 16819 | 2024-04-06 | 2023-03-09 | 4.7 | 4.86 | 4.41 | 4.7 | 0.007 | 1.10 | 0.0 | 0.05 | 14.06 | 0.01 | 2.192 | 25.76 | 0.00 | 4.6 | 95.4 | 0.0 | -4.04 | 0.71 | 0.79 | — | 4.7 | 0.003 | 0.75 | 0.0 | 0.04 | 13.98 | 0.00 | 2.161 | 13.18 | 0.00 | 3.3 | 96.7 | 0.0 | 0.51 | 1.46 | 0.71 | 0.79 | — | 8233 | 1022 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 7W6M | 32329 | 2024-04-14 | 2021-12-02 | 4.7 | 4.96 | 4.72 | 4.7 | 0.005 | 0.83 | 0.0 | 0.06 | 25.50 | 0.00 | 2.107 | 9.16 | 0.00 | 4.4 | 95.6 | 0.0 | -0.63 | 0.85 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30756 | 3672 | 51 | 0 | 204 | 0 | 0 | logfile |
✔ | 6ZM1 | 11277 | 2024-04-15 | 2020-07-01 | 4.7 | 4.57 | — | 4.3 | 0.007 | 0.91 | 0.0 | 0.06 | 16.15 | 0.01 | 0.828 | 14.04 | 0.55 | 6.5 | 93.3 | 0.2 | -3.15 | 0.76 | 0.60 | — | 4.3 | 0.004 | 0.75 | 0.0 | 0.05 | 13.66 | 0.00 | 2.064 | 18.07 | 0.00 | 6.0 | 94.0 | 0.0 | -1.03 | 1.20 | 0.86 | 0.79 | — | 22543 | 2844 | 4 | 0 | 0 | 0 | 0 | logfile |