The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 5GKZ | 9519 | 2024-04-06 | 2016-07-07 | 4.0 | 4.10 | — | 4.0 | 0.019 | 1.71 | 36.0 | 0.11 | 11.29 | 0.01 | 1.755 | 15.04 | 0.51 | 6.5 | 91.2 | 2.3 | -2.89 | 0.72 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111000 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 5GKY | 9518 | 2024-04-06 | 2016-07-07 | 3.8 | 4.18 | — | 4.0 | 0.017 | 1.70 | 19.0 | 0.10 | 11.29 | 0.01 | 1.789 | 19.04 | 0.51 | 5.8 | 91.8 | 2.5 | -2.71 | 0.73 | 0.79 | 1.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111036 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 5GL0 | 9520 | 2024-04-06 | 2016-07-07 | 4.2 | 4.40 | — | 4.2 | 0.018 | 1.72 | 17.0 | 0.10 | 11.34 | 0.01 | 1.957 | 21.25 | 0.51 | 6.5 | 90.6 | 2.9 | -2.58 | 0.74 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111000 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 5GM6 | 9524 | 2024-04-06 | 2016-07-12 | 3.5 | 3.61 | — | 3.6 | 0.012 | 1.33 | 11.0 | 0.08 | 15.15 | 0.01 | 1.303 | 18.95 | 3.36 | 6.6 | 92.1 | 1.2 | -3.54 | 0.58 | 0.83 | 2.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 112064 | 12796 | 55 | 361 | 881 | 0 | 0 | logfile |
✔ | 5KUF | 8289 | 2024-04-11 | 2016-07-13 | 3.8 | 3.80 | — | 3.7 | 0.009 | 1.02 | 0.0 | 0.05 | 9.23 | 0.01 | 2.021 | 29.22 | 0.08 | 15.5 | 84.4 | 0.1 | -5.82 | 0.61 | 0.71 | 1.68 | 3.7 | 0.004 | 0.72 | 0.0 | 0.04 | 14.01 | 0.00 | 2.128 | 17.06 | 3.04 | 7.9 | 92.1 | 0.0 | -1.92 | 1.55 | 0.62 | 0.72 | 1.32 | 23728 | 3000 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 5Li0 | 4050 | 2024-04-14 | 2016-07-13 | 3.8 | 3.91 | — | 3.8 | 0.014 | 1.18 | 1.0 | 0.05 | 22.55 | 0.01 | 1.920 | 5.40 | 0.20 | 14.9 | 84.7 | 0.5 | -5.64 | 0.75 | 0.79 | 1.99 | 3.8 | 0.007 | 0.79 | 0.0 | 0.04 | 22.61 | 0.01 | 1.340 | 15.04 | 5.16 | 11.2 | 88.6 | 0.1 | -2.64 | 0.71 | 0.76 | 0.81 | 1.21 | 140825 | 5396 | 58 | 4575 | 41 | 162 | 0 | logfile |
✔ | 5Lii | 4053 | 2024-04-05 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | 3.8 | 0.003 | 0.87 | 0.0 | 0.04 | 16.56 | 0.01 | 2.215 | 13.32 | 7.07 | 12.1 | 87.2 | 0.7 | -4.25 | 0.80 | 0.55 | 0.66 | 1.49 | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2024-04-04 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 5GMK | 9525 | 2024-04-11 | 2016-07-14 | 3.4 | 3.52 | — | 3.5 | 0.012 | 1.25 | 16.0 | 0.07 | 16.17 | 0.01 | 1.378 | 19.35 | 2.77 | 7.7 | 91.2 | 1.0 | -3.71 | 0.47 | 0.53 | 1.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 75273 | 8026 | 51 | 404 | 981 | 0 | 0 | logfile |
✔ | 5Li4 | 4052 | 2024-04-10 | 2016-07-14 | 4.2 | 5.13 | — | 4.0 | 0.053 | 3.07 | 114.0 | 0.34 | 14.44 | 0.02 | 0.111 | 93.07 | 2.94 | 14.0 | 79.1 | 6.9 | -4.32 | 0.24 | 0.30 | — | 4.1 | 0.005 | 1.06 | 2.0 | 0.05 | 13.91 | 0.01 | 2.083 | 35.87 | 0.00 | 16.6 | 82.5 | 0.9 | -3.94 | 4.20 | 0.34 | 0.59 | — | 20070 | 2562 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LJ3 | 4055 | 2024-04-07 | 2016-07-17 | 3.8 | 3.92 | — | 3.8 | 0.007 | 1.46 | 40.0 | 0.09 | 19.67 | 0.01 | 1.631 | 5.99 | 8.54 | 8.1 | 90.7 | 1.2 | -1.69 | 0.70 | 0.81 | 1.37 | 3.8 | 0.004 | 0.73 | 0.0 | 0.04 | 19.69 | 0.00 | 2.029 | 15.43 | 5.50 | 5.7 | 94.2 | 0.2 | 0.23 | 0.83 | 0.70 | 0.79 | 1.43 | 63161 | 7305 | 45 | 458 | 142 | 0 | 0 | logfile |
✔ | 5LJo | 4061 | 2024-04-12 | 2016-07-19 | 4.9 | 7.28 | — | 5.9 | 0.014 | 1.69 | 1.0 | 0.08 | 11.01 | 0.01 | 2.147 | 5.45 | 0.15 | 9.4 | 86.8 | 3.8 | -2.52 | 0.69 | 0.58 | — | 5.8 | 0.004 | 0.72 | 0.0 | 0.04 | 12.90 | 0.01 | 1.933 | 21.13 | 0.00 | 12.9 | 86.8 | 0.3 | -2.47 | 1.33 | 0.80 | 0.80 | — | 24947 | 1624 | 5 | 0 | 0 | 0 | 12255 | logfile |
✔ | 5KYH | 8298 | 2024-04-16 | 2016-07-21 | 4.0 | 3.99 | — | 4.2 | 0.014 | 1.82 | 0.0 | 0.11 | 11.44 | 0.01 | 1.692 | 34.34 | 3.90 | 2.5 | 96.2 | 1.3 | -0.68 | 0.47 | 0.78 | — | 4.1 | 0.004 | 0.75 | 0.0 | 0.05 | 14.95 | 0.00 | 2.087 | 10.82 | 3.04 | 5.2 | 94.8 | 0.0 | 0.23 | 1.71 | 0.47 | 0.79 | — | 38892 | 5082 | 21 | 0 | 0 | 0 | 0 | logfile |
✘ | 5LJV | 4062 | 2024-04-09 | 2016-07-21 | 3.64 | 3.75 | — | 3.7 | 0.030 | 2.85 | 85.0 | 0.16 | 18.81 | 0.02 | 2.070 | 21.28 | 11.82 | 7.4 | 89.7 | 2.9 | -4.53 | 0.71 | 0.84 | 2.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15000 | 1950 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 5LKi | 4068 | 2024-04-06 | 2016-07-22 | 3.46 | 3.72 | — | 3.5 | 0.013 | 1.24 | 5.0 | 0.06 | 10.71 | 0.01 | 0.579 | 39.51 | 0.18 | 7.7 | 91.7 | 0.6 | -4.39 | 0.65 | 0.79 | 2.37 | 3.5 | 0.003 | 0.82 | 0.0 | 0.04 | 15.17 | 0.00 | 2.057 | 14.65 | 2.61 | 6.9 | 92.7 | 0.4 | 0.35 | 0.80 | 0.63 | 0.80 | 1.69 | 55415 | 7135 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 5LKH | 4068 | 2024-04-16 | 2016-07-22 | 3.46 | 5.27 | — | 11.0 | 0.018 | 2.37 | 65.0 | 0.12 | 12.66 | 0.02 | 2.255 | 87.12 | 1.96 | 3.4 | 95.2 | 1.4 | -0.27 | 0.38 | 0.17 | -0.03 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37345 | 4740 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LL6 | 4071 | 2024-04-06 | 2016-07-26 | 3.9 | 4.01 | — | 3.9 | 0.012 | 1.50 | 6.0 | 0.11 | 23.63 | 0.01 | 0.924 | 4.96 | 2.53 | 10.6 | 85.7 | 3.7 | -3.86 | 0.69 | 0.82 | 1.20 | 3.9 | 0.005 | 0.77 | 2.0 | 0.04 | 23.27 | 0.01 | 1.691 | 16.42 | 3.70 | 10.1 | 89.0 | 0.9 | -2.12 | 0.82 | 0.69 | 0.79 | 0.99 | 55262 | 3429 | 20 | 1325 | 5 | 0 | 0 | logfile |
✘ | 5GoA | 9529 | 2024-04-16 | 2016-07-26 | 4.2 | 4.52 | — | 4.2 | 0.022 | 1.86 | 60.0 | 0.12 | 12.40 | 0.01 | 1.505 | 7.29 | 1.03 | 8.5 | 90.9 | 0.7 | -4.96 | 0.81 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 105072 | 13692 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 5L08 | 8300 | 2024-04-08 | 2016-07-26 | 4.6 | 3.95 | — | 4.3 | 0.011 | 1.03 | 0.0 | 0.05 | 11.66 | 0.00 | 2.041 | 6.99 | 0.00 | 3.0 | 96.8 | 0.2 | -0.41 | 0.34 | 0.71 | — | 4.3 | 0.005 | 1.12 | 0.0 | 0.05 | 14.44 | 0.01 | 1.786 | 38.60 | 0.00 | 7.3 | 92.7 | 0.0 | -2.22 | 3.33 | 0.27 | 0.73 | — | 13617 | 1629 | 9 | 0 | 0 | 0 | 0 | logfile |
✘ | 5Go9 | 9528 | 2024-04-16 | 2016-07-26 | 4.4 | 4.59 | — | 4.4 | 0.020 | 1.79 | 36.0 | 0.11 | 12.27 | 0.01 | 2.185 | 7.55 | 0.88 | 8.7 | 90.7 | 0.6 | -4.90 | 0.78 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 105068 | 13692 | 8 | 0 | 4 | 0 | 0 | logfile |